RNA–Protein interactions for RNA: ENST00000402876.3

PARVB-202, Transcript of parvin beta, humanhuman

TSL 1 (best)

Gene PARVB, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARVB-202ENST00000402876 MRS2Q9HD23 443 aa26.3■■□□□ 1.8
PARVB-202ENST00000402876 LTBP4Q8N2S1 1624 aa26.29■■□□□ 1.8
PARVB-202ENST00000402876 FYB1O15117 783 aa26.29■■□□□ 1.8
PARVB-202ENST00000402876 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.29■■□□□ 1.8
PARVB-202ENST00000402876 TTC21BQ7Z4L5 1316 aa26.27■■□□□ 1.8
PARVB-202ENST00000402876 TTC21AQ8NDW8 1320 aa26.27■■□□□ 1.8
PARVB-202ENST00000402876 SSH2Q76I76 1423 aa26.27■■□□□ 1.8
PARVB-202ENST00000402876 PPP2R1AP30153 589 aa26.26■■□□□ 1.79
PARVB-202ENST00000402876 GGNBP2Q9H3C7 697 aa26.26■■□□□ 1.79
PARVB-202ENST00000402876 CERKQ8TCT0 537 aa26.25■■□□□ 1.79
PARVB-202ENST00000402876 CCDC184Q52MB2 194 aa26.24■■□□□ 1.79
PARVB-202ENST00000402876 USP54Q70EL1 1684 aa26.23■■□□□ 1.79
PARVB-202ENST00000402876 ORAI2Q96SN7 254 aa26.23■■□□□ 1.79
PARVB-202ENST00000402876 PIK3C2AO00443 1686 aa26.22■■□□□ 1.79
PARVB-202ENST00000402876 NME9Q86XW9 330 aa26.22■■□□□ 1.79
PARVB-202ENST00000402876 PSME1Q06323 249 aa26.19■■□□□ 1.78
PARVB-202ENST00000402876 COG3Q96JB2 828 aa26.19■■□□□ 1.78
PARVB-202ENST00000402876 TRPM3Q9HCF6 1732 aaPredicted RBP26.19■■□□□ 1.78
PARVB-202ENST00000402876 SCAF1Q9H7N4 1312 aaKnown RBP26.18■■□□□ 1.78
PARVB-202ENST00000402876 OVOS2A0A0J9YW53 1432 aa26.17■■□□□ 1.78
PARVB-202ENST00000402876 OVOS2Q6IE36 1432 aa26.17■■□□□ 1.78
PARVB-202ENST00000402876 TNNT2P45379 298 aaPredicted RBP26.17■■□□□ 1.78
PARVB-202ENST00000402876 MAP2P11137 1827 aaKnown RBP26.16■■□□□ 1.78
PARVB-202ENST00000402876 USP31Q70CQ4 1352 aa26.15■■□□□ 1.78
PARVB-202ENST00000402876 MARF1Q9Y4F3 1742 aaKnown RBP26.14■■□□□ 1.78
PARVB-202ENST00000402876 FOXO3O43524 673 aa26.14■■□□□ 1.78
PARVB-202ENST00000402876 SLAIN2Q9P270 581 aa26.14■■□□□ 1.78
PARVB-202ENST00000402876 PAK3O75914 559 aaPredicted RBP26.12■■□□□ 1.77
PARVB-202ENST00000402876 ZRANB1Q9UGI0 708 aa26.12■■□□□ 1.77
PARVB-202ENST00000402876 NPHP3Q7Z494 1330 aa26.12■■□□□ 1.77
PARVB-202ENST00000402876 KRT28Q7Z3Y7 464 aa26.11■■□□□ 1.77
PARVB-202ENST00000402876 AATKQ6ZMQ8 1374 aa26.1■■□□□ 1.77
PARVB-202ENST00000402876 ALS2Q96Q42 1657 aa26.1■■□□□ 1.77
PARVB-202ENST00000402876 FAM9BQ8IZU0 186 aa26.1■■□□□ 1.77
PARVB-202ENST00000402876 PNISRQ8TF01 805 aaKnown RBP26.1■■□□□ 1.77
PARVB-202ENST00000402876 YTHDC1Q96MU7 727 aaKnown RBP26.1■■□□□ 1.77
PARVB-202ENST00000402876 BRINP3Q76B58 766 aa26.09■■□□□ 1.77
PARVB-202ENST00000402876 CFAP53Q96M91 514 aa26.09■■□□□ 1.77
PARVB-202ENST00000402876 NHSL1Q5SYE7 1610 aa26.08■■□□□ 1.77
PARVB-202ENST00000402876 MTHFSP49914 203 aa26.08■■□□□ 1.77
PARVB-202ENST00000402876 ABTB2Q8N961 1025 aa26.08■■□□□ 1.77
PARVB-202ENST00000402876 NLRP6P59044 892 aa26.07■■□□□ 1.76
PARVB-202ENST00000402876 SMG6Q86US8 1419 aaKnown RBP26.06■■□□□ 1.76
PARVB-202ENST00000402876 PXDNQ92626 1479 aa26.06■■□□□ 1.76
PARVB-202ENST00000402876 SBNO1A3KN83 1393 aa26.06■■□□□ 1.76
PARVB-202ENST00000402876 SHPRHQ149N8 1683 aa26.06■■□□□ 1.76
PARVB-202ENST00000402876 XPCQ01831 940 aaPredicted RBP26.05■■□□□ 1.76
PARVB-202ENST00000402876 IQSEC2Q5JU85 1478 aa26.03■■□□□ 1.76
PARVB-202ENST00000402876 ROBO1Q9Y6N7 1651 aa26.03■■□□□ 1.76
PARVB-202ENST00000402876 WDR43Q15061 677 aaKnown RBP eCLIP26.02■■□□□ 1.76
PARVB-202ENST00000402876 CDK12Q9NYV4 1490 aaPredicted RBP26.02■■□□□ 1.76
PARVB-202ENST00000402876 TNS3Q68CZ2 1445 aa26.01■■□□□ 1.75
PARVB-202ENST00000402876 POLKQ9UBT6 870 aa26.01■■□□□ 1.75
PARVB-202ENST00000402876 COL3A1P02461 1466 aaPredicted RBP26■■□□□ 1.75
PARVB-202ENST00000402876 INSRP06213 1382 aa26■■□□□ 1.75
PARVB-202ENST00000402876 NUTM2GQ5VZR2 741 aa26■■□□□ 1.75
PARVB-202ENST00000402876 SLIT3O75094 1523 aa25.99■■□□□ 1.75
PARVB-202ENST00000402876 LTN1O94822 1766 aa25.98■■□□□ 1.75
PARVB-202ENST00000402876 DDX17Q92841 729 aaKnown RBP25.98■■□□□ 1.75
PARVB-202ENST00000402876 PNPLA6Q8IY17 1366 aa25.97■■□□□ 1.75
PARVB-202ENST00000402876 LMOD2Q6P5Q4 547 aa25.97■■□□□ 1.75
PARVB-202ENST00000402876 ARHGEF10O15013 1369 aa25.96■■□□□ 1.75
PARVB-202ENST00000402876 EMILIN1Q9Y6C2 1016 aa25.96■■□□□ 1.75
PARVB-202ENST00000402876 NFAT5O94916 1531 aa25.96■■□□□ 1.75
PARVB-202ENST00000402876 PEAK1Q9H792 1746 aa25.96■■□□□ 1.75
PARVB-202ENST00000402876 AHDC1Q5TGY3 1603 aaPredicted RBP25.96■■□□□ 1.75
PARVB-202ENST00000402876 SOS2Q07890 1332 aaPredicted RBP25.95■■□□□ 1.75
PARVB-202ENST00000402876 FBLN1P23142 703 aa25.95■■□□□ 1.74
PARVB-202ENST00000402876 RRS1Q15050 365 aaKnown RBP25.95■■□□□ 1.74
PARVB-202ENST00000402876 KCNH5Q8NCM2 988 aa25.95■■□□□ 1.74
PARVB-202ENST00000402876 PHRF1Q9P1Y6 1649 aaKnown RBP25.95■■□□□ 1.74
PARVB-202ENST00000402876 MED1Q15648 1581 aaPredicted RBP25.95■■□□□ 1.74
PARVB-202ENST00000402876 USP19O94966 1318 aa25.94■■□□□ 1.74
PARVB-202ENST00000402876 SPATA31A3Q5VYP0 1347 aa25.94■■□□□ 1.74
PARVB-202ENST00000402876 PPM1GO15355 546 aaPredicted RBP25.94■■□□□ 1.74
PARVB-202ENST00000402876 CRYBG1Q9Y4K1 1723 aa25.94■■□□□ 1.74
PARVB-202ENST00000402876 SOX12O15370 315 aa25.93■■□□□ 1.74
PARVB-202ENST00000402876 TOM1O60784 492 aa25.93■■□□□ 1.74
PARVB-202ENST00000402876 NUDCQ9Y266 331 aa25.93■■□□□ 1.74
PARVB-202ENST00000402876 BLMP54132 1417 aaPredicted RBP25.93■■□□□ 1.74
PARVB-202ENST00000402876 KIF24Q5T7B8 1368 aa25.93■■□□□ 1.74
PARVB-202ENST00000402876 HNRNPUQ00839 825 aaKnown RBP eCLIP25.92■■□□□ 1.74
PARVB-202ENST00000402876 DIAPH1O60610 1272 aaKnown RBP25.91■■□□□ 1.74
PARVB-202ENST00000402876 ADAMTS8Q9UP79 889 aa25.91■■□□□ 1.74
PARVB-202ENST00000402876 MAP3K19Q56UN5 1328 aa25.89■■□□□ 1.74
PARVB-202ENST00000402876 RTL1A6NKG5 1358 aa25.89■■□□□ 1.74
PARVB-202ENST00000402876 FLT4P35916 1363 aa25.89■■□□□ 1.74
PARVB-202ENST00000402876 PHLPP1O60346 1717 aa25.88■■□□□ 1.73
PARVB-202ENST00000402876 CENPBP07199 599 aaPredicted RBP25.87■■□□□ 1.73
PARVB-202ENST00000402876 ABCA3Q99758 1704 aa25.86■■□□□ 1.73
PARVB-202ENST00000402876 GCP02774 474 aa25.86■■□□□ 1.73
PARVB-202ENST00000402876 AMPHP49418 695 aa25.86■■□□□ 1.73
PARVB-202ENST00000402876 U2SURPO15042 1029 aaKnown RBP25.83■■□□□ 1.73
PARVB-202ENST00000402876 UBAP1LF5GYI3 381 aa25.82■■□□□ 1.72
PARVB-202ENST00000402876 U2AF1L5P0DN76 240 aaPredicted RBP25.82■■□□□ 1.72
PARVB-202ENST00000402876 U2AF1Q01081 240 aaKnown RBP eCLIP25.82■■□□□ 1.72
PARVB-202ENST00000402876 IL13P35225 146 aa25.81■■□□□ 1.72
PARVB-202ENST00000402876 RGPD1P0DJD0 1748 aa25.8■■□□□ 1.72
PARVB-202ENST00000402876 COL16A1Q07092 1604 aaPredicted RBP25.8■■□□□ 1.72
PARVB-202ENST00000402876 ABCC6O95255 1503 aa25.79■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms