RNA–Protein interactions for RNA: ENST00000401408.5

CLHC1-201, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLHC1, Length 2,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-201ENST00000401408 PTGER2P43116 358 aa5.27□□□□□ -1.57
CLHC1-201ENST00000401408 TSR1Q2NL82 804 aaKnown RBP5.27□□□□□ -1.57
CLHC1-201ENST00000401408 FOXD4L6Q3SYB3 417 aaPredicted RBP5.27□□□□□ -1.57
CLHC1-201ENST00000401408 FOXD4L3Q6VB84 417 aaPredicted RBP5.27□□□□□ -1.57
CLHC1-201ENST00000401408 FAM9BQ8IZU0 186 aa5.27□□□□□ -1.57
CLHC1-201ENST00000401408 MRRFQ96E11 262 aaKnown RBP5.27□□□□□ -1.57
CLHC1-201ENST00000401408 POM121Q96HA1 1249 aa5.27□□□□□ -1.57
CLHC1-201ENST00000401408 RYDENQ9NUL5 291 aaKnown RBP5.27□□□□□ -1.57
CLHC1-201ENST00000401408 NCKAP5LQ9HCH0 1330 aa5.27□□□□□ -1.57
CLHC1-201ENST00000401408 CNTLNQ9NXG0 1405 aa5.27□□□□□ -1.57
CLHC1-201ENST00000401408 PRXQ9BXM0 1461 aa5.27□□□□□ -1.57
CLHC1-201ENST00000401408 MLH3Q9UHC1 1453 aa5.27□□□□□ -1.57
CLHC1-201ENST00000401408 STRCP1A6NGW2 1772 aa5.27□□□□□ -1.57
CLHC1-201ENST00000401408 POTEAQ6S8J7 498 aa5.27□□□□□ -1.57
CLHC1-201ENST00000401408 SLC52A1Q9NWF4 448 aa5.27□□□□□ -1.57
CLHC1-201ENST00000401408 IVNS1ABPQ9Y6Y0 642 aa5.27□□□□□ -1.57
CLHC1-201ENST00000401408 ZNF518AQ6AHZ1 1483 aa5.27□□□□□ -1.57
CLHC1-201ENST00000401408 SHANK2Q9UPX8 1470 aa5.27□□□□□ -1.57
CLHC1-201ENST00000401408 RIOK3O14730 519 aaKnown RBP5.26□□□□□ -1.57
CLHC1-201ENST00000401408 TOM1O60784 492 aa5.26□□□□□ -1.57
CLHC1-201ENST00000401408 PTPRKQ15262 1439 aa5.26□□□□□ -1.57
CLHC1-201ENST00000401408 SMYD5Q6GMV2 418 aa5.26□□□□□ -1.57
CLHC1-201ENST00000401408 DDRGK1Q96HY6 314 aa5.26□□□□□ -1.57
CLHC1-201ENST00000401408 EP400Q96L91 3159 aa5.26□□□□□ -1.57
CLHC1-201ENST00000401408 TRIM35Q9UPQ4 493 aa5.26□□□□□ -1.57
CLHC1-201ENST00000401408 KIDINS220Q9ULH0 1771 aa5.26□□□□□ -1.57
CLHC1-201ENST00000401408 DNMT1P26358 1616 aaKnown RBP5.26□□□□□ -1.57
CLHC1-201ENST00000401408 APBB1IPQ7Z5R6 666 aaPredicted RBP5.25□□□□□ -1.57
CLHC1-201ENST00000401408 TERF2IPQ9NYB0 399 aa5.25□□□□□ -1.57
CLHC1-201ENST00000401408 MYO5CQ9NQX4 1742 aa5.25□□□□□ -1.57
CLHC1-201ENST00000401408 FOSBP53539 338 aa5.25□□□□□ -1.57
CLHC1-201ENST00000401408 RALBP1Q15311 655 aa5.25□□□□□ -1.57
CLHC1-201ENST00000401408 ZNF662Q6ZS27 426 aa5.25□□□□□ -1.57
CLHC1-201ENST00000401408 SECISBP2LQ93073 1101 aaKnown RBP5.25□□□□□ -1.57
CLHC1-201ENST00000401408 KIF12Q96FN5 646 aa5.25□□□□□ -1.57
CLHC1-201ENST00000401408 NAP1L2Q9ULW6 460 aaPredicted RBP5.25□□□□□ -1.57
CLHC1-201ENST00000401408 RAB11FIP3O75154 756 aa5.24□□□□□ -1.57
CLHC1-201ENST00000401408 XIRP1Q702N8 1843 aaKnown RBP5.24□□□□□ -1.57
CLHC1-201ENST00000401408 RNF17Q9BXT8 1623 aaKnown RBP5.24□□□□□ -1.57
CLHC1-201ENST00000401408 PIP4K2BP78356 416 aa5.24□□□□□ -1.57
CLHC1-201ENST00000401408 MED14O60244 1454 aa5.24□□□□□ -1.57
CLHC1-201ENST00000401408 PLCG2P16885 1265 aa5.23□□□□□ -1.57
CLHC1-201ENST00000401408 GIMAP6Q6P9H5 292 aa5.23□□□□□ -1.57
CLHC1-201ENST00000401408 UBXN4Q92575 508 aa5.23□□□□□ -1.57
CLHC1-201ENST00000401408 DEPDC5O75140 1603 aa5.23□□□□□ -1.57
CLHC1-201ENST00000401408 ZMYM3Q14202 1370 aa5.23□□□□□ -1.57
CLHC1-201ENST00000401408 CDC42BPBQ9Y5S2 1711 aa5.23□□□□□ -1.57
CLHC1-201ENST00000401408 TCF3P15923 654 aa5.23□□□□□ -1.57
CLHC1-201ENST00000401408 GLIPR1L2Q4G1C9 344 aa5.23□□□□□ -1.57
CLHC1-201ENST00000401408 RBM26Q5T8P6 1007 aaKnown RBP5.23□□□□□ -1.57
CLHC1-201ENST00000401408 C8orf37Q96NL8 207 aa5.23□□□□□ -1.57
CLHC1-201ENST00000401408 SYNMO15061 1565 aa5.22□□□□□ -1.57
CLHC1-201ENST00000401408 LRRC7Q96NW7 1537 aa5.22□□□□□ -1.57
CLHC1-201ENST00000401408 A2ML1A8K2U0 1454 aa5.22□□□□□ -1.57
CLHC1-201ENST00000401408 HMGB1P1B2RPK0 211 aaPredicted RBP5.22□□□□□ -1.57
CLHC1-201ENST00000401408 PEX14O75381 377 aa5.22□□□□□ -1.57
CLHC1-201ENST00000401408 MORC4Q8TE76 937 aa5.22□□□□□ -1.57
CLHC1-201ENST00000401408 UPF1Q92900 1129 aaKnown RBP eCLIP5.22□□□□□ -1.57
CLHC1-201ENST00000401408 PLXNC1O60486 1568 aa5.22□□□□□ -1.57
CLHC1-201ENST00000401408 CLTCQ00610 1675 aaKnown RBP5.22□□□□□ -1.57
CLHC1-201ENST00000401408 MCCD1P59942 119 aaPredicted RBP5.21□□□□□ -1.57
CLHC1-201ENST00000401408 GPIHBP1Q8IV16 184 aa5.21□□□□□ -1.57
CLHC1-201ENST00000401408 AFAP1Q8N556 730 aa5.21□□□□□ -1.57
CLHC1-201ENST00000401408 E2F4Q16254 413 aa5.21□□□□□ -1.58
CLHC1-201ENST00000401408 Q6ZNB5 142 aa5.21□□□□□ -1.58
CLHC1-201ENST00000401408 MIER1Q8N108 512 aa5.21□□□□□ -1.58
CLHC1-201ENST00000401408 NME8Q8N427 588 aa5.21□□□□□ -1.58
CLHC1-201ENST00000401408 ITSN2Q9NZM3 1697 aa5.2□□□□□ -1.58
CLHC1-201ENST00000401408 ERCC3P19447 782 aa5.2□□□□□ -1.58
CLHC1-201ENST00000401408 IPO4Q8TEX9 1081 aaKnown RBP5.2□□□□□ -1.58
CLHC1-201ENST00000401408 KCNG1Q9UIX4 513 aa5.2□□□□□ -1.58
CLHC1-201ENST00000401408 ABCC1P33527 1531 aa5.2□□□□□ -1.58
CLHC1-201ENST00000401408 KIF14Q15058 1648 aa5.2□□□□□ -1.58
CLHC1-201ENST00000401408 ZC3H13Q5T200 1668 aaKnown RBP5.2□□□□□ -1.58
CLHC1-201ENST00000401408 MAP4K4O95819 1239 aaPredicted RBP5.2□□□□□ -1.58
CLHC1-201ENST00000401408 MNX1P50219 401 aaPredicted RBP5.2□□□□□ -1.58
CLHC1-201ENST00000401408 SKIV2LQ15477 1246 aaKnown RBP5.2□□□□□ -1.58
CLHC1-201ENST00000401408 GOPCQ9HD26 462 aa5.2□□□□□ -1.58
CLHC1-201ENST00000401408 CCDC61Q9Y6R9 512 aa5.2□□□□□ -1.58
CLHC1-201ENST00000401408 CARNS1A5YM72 827 aa5.19□□□□□ -1.58
CLHC1-201ENST00000401408 EFCAB2Q5VUJ9 269 aa5.19□□□□□ -1.58
CLHC1-201ENST00000401408 ZNF330Q9Y3S2 320 aaPredicted RBP5.19□□□□□ -1.58
CLHC1-201ENST00000401408 ERBB3P21860 1342 aa5.19□□□□□ -1.58
CLHC1-201ENST00000401408 FAM135BQ49AJ0 1406 aa5.19□□□□□ -1.58
CLHC1-201ENST00000401408 CDK13Q14004 1512 aaKnown RBP5.19□□□□□ -1.58
CLHC1-201ENST00000401408 IQGAP1P46940 1657 aa5.19□□□□□ -1.58
CLHC1-201ENST00000401408 RGS20O76081 388 aa5.19□□□□□ -1.58
CLHC1-201ENST00000401408 ERICH6BQ5W0A0 696 aa5.19□□□□□ -1.58
CLHC1-201ENST00000401408 TXNDC2Q86VQ3 553 aa5.19□□□□□ -1.58
CLHC1-201ENST00000401408 ANP32EQ9BTT0 268 aa5.19□□□□□ -1.58
CLHC1-201ENST00000401408 UBA5Q9GZZ9 404 aa5.19□□□□□ -1.58
CLHC1-201ENST00000401408 USTQ9Y2C2 406 aa5.19□□□□□ -1.58
CLHC1-201ENST00000401408 STK24Q9Y6E0 443 aa5.19□□□□□ -1.58
CLHC1-201ENST00000401408 PCMTD1Q96MG8 357 aaPredicted RBP5.18□□□□□ -1.58
CLHC1-201ENST00000401408 KLHL42Q9P2K6 505 aa5.18□□□□□ -1.58
CLHC1-201ENST00000401408 STAG3Q9UJ98 1225 aa5.18□□□□□ -1.58
CLHC1-201ENST00000401408 DEKP35659 375 aaKnown RBP5.17□□□□□ -1.58
CLHC1-201ENST00000401408 ZC3H6P61129 1189 aaKnown RBP5.17□□□□□ -1.58
CLHC1-201ENST00000401408 SF3A1Q15459 793 aaKnown RBP5.17□□□□□ -1.58
CLHC1-201ENST00000401408 LONRF3Q496Y0 759 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms