RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 CDC42BPBQ9Y5S2 1711 aa8.11□□□□□ -1.11
TRAPPC13-202ENST00000399438 ARAP3Q8WWN8 1544 aa8.11□□□□□ -1.11
TRAPPC13-202ENST00000399438 DENND4BO75064 1496 aaPredicted RBP8.11□□□□□ -1.11
TRAPPC13-202ENST00000399438 BCL2L13Q9BXK5 485 aa8.11□□□□□ -1.11
TRAPPC13-202ENST00000399438 KIF13AQ9H1H9 1805 aa8.11□□□□□ -1.11
TRAPPC13-202ENST00000399438 EGFLAMQ63HQ2 1017 aa8.1□□□□□ -1.11
TRAPPC13-202ENST00000399438 MAMSTRQ6ZN01 415 aa8.1□□□□□ -1.11
TRAPPC13-202ENST00000399438 MTA3Q9BTC8 594 aa8.1□□□□□ -1.11
TRAPPC13-202ENST00000399438 MIA2Q96PC5 1412 aa8.1□□□□□ -1.11
TRAPPC13-202ENST00000399438 MINK1Q8N4C8 1332 aaPredicted RBP8.1□□□□□ -1.11
TRAPPC13-202ENST00000399438 TCOF1Q13428 1488 aaKnown RBP8.1□□□□□ -1.11
TRAPPC13-202ENST00000399438 APLP1P51693 650 aa8.1□□□□□ -1.11
TRAPPC13-202ENST00000399438 CFAP70Q5T0N1 1121 aa8.1□□□□□ -1.11
TRAPPC13-202ENST00000399438 MRS2Q9HD23 443 aa8.1□□□□□ -1.11
TRAPPC13-202ENST00000399438 SNRKQ9NRH2 765 aa8.1□□□□□ -1.11
TRAPPC13-202ENST00000399438 NUBP1P53384 320 aa8.1□□□□□ -1.11
TRAPPC13-202ENST00000399438 NOP9Q86U38 636 aaKnown RBP8.1□□□□□ -1.11
TRAPPC13-202ENST00000399438 GIPC2Q8TF65 315 aa8.1□□□□□ -1.11
TRAPPC13-202ENST00000399438 MAF1Q9H063 256 aa8.1□□□□□ -1.11
TRAPPC13-202ENST00000399438 PLCH2O75038 1416 aa8.09□□□□□ -1.11
TRAPPC13-202ENST00000399438 PTMAP06454 111 aaKnown RBP8.09□□□□□ -1.11
TRAPPC13-202ENST00000399438 VAMP1P23763 118 aa8.09□□□□□ -1.11
TRAPPC13-202ENST00000399438 FAN1Q9Y2M0 1017 aa8.09□□□□□ -1.11
TRAPPC13-202ENST00000399438 PAX3P23760 479 aa8.09□□□□□ -1.11
TRAPPC13-202ENST00000399438 CLEC4GQ6UXB4 293 aa8.09□□□□□ -1.11
TRAPPC13-202ENST00000399438 RFX1P22670 979 aa8.08□□□□□ -1.12
TRAPPC13-202ENST00000399438 NPAS4Q8IUM7 802 aa8.08□□□□□ -1.12
TRAPPC13-202ENST00000399438 U2SURPO15042 1029 aaKnown RBP8.08□□□□□ -1.12
TRAPPC13-202ENST00000399438 SPACA7Q96KW9 195 aa8.08□□□□□ -1.12
TRAPPC13-202ENST00000399438 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.08□□□□□ -1.12
TRAPPC13-202ENST00000399438 ABCC5O15440 1437 aa8.08□□□□□ -1.12
TRAPPC13-202ENST00000399438 SAMD9LQ8IVG5 1584 aa8.08□□□□□ -1.12
TRAPPC13-202ENST00000399438 PPRC1Q5VV67 1664 aaKnown RBP8.08□□□□□ -1.12
TRAPPC13-202ENST00000399438 RECKO95980 971 aa8.08□□□□□ -1.12
TRAPPC13-202ENST00000399438 TLDC2A0PJX2 215 aa8.07□□□□□ -1.12
TRAPPC13-202ENST00000399438 IRF6O14896 467 aa8.07□□□□□ -1.12
TRAPPC13-202ENST00000399438 KRBA2Q6ZNG9 492 aa8.07□□□□□ -1.12
TRAPPC13-202ENST00000399438 LNPKQ9C0E8 428 aa8.07□□□□□ -1.12
TRAPPC13-202ENST00000399438 ARHGAP5Q13017 1502 aa8.07□□□□□ -1.12
TRAPPC13-202ENST00000399438 ZFYVE27Q5T4F4 411 aa8.07□□□□□ -1.12
TRAPPC13-202ENST00000399438 PNMA2Q9UL42 364 aa8.07□□□□□ -1.12
TRAPPC13-202ENST00000399438 NCKAP5LQ9HCH0 1330 aa8.07□□□□□ -1.12
TRAPPC13-202ENST00000399438 CD109Q6YHK3 1445 aa8.07□□□□□ -1.12
TRAPPC13-202ENST00000399438 CAMSAP2Q08AD1 1489 aa8.07□□□□□ -1.12
TRAPPC13-202ENST00000399438 CFAP74Q9C0B2 1584 aa8.07□□□□□ -1.12
TRAPPC13-202ENST00000399438 DAPK1P53355 1430 aa8.06□□□□□ -1.12
TRAPPC13-202ENST00000399438 MAP2K5Q13163 448 aa8.06□□□□□ -1.12
TRAPPC13-202ENST00000399438 KCNB2Q92953 911 aa8.06□□□□□ -1.12
TRAPPC13-202ENST00000399438 KIF7Q2M1P5 1343 aa8.06□□□□□ -1.12
TRAPPC13-202ENST00000399438 EIF3JO75822 258 aaKnown RBP8.06□□□□□ -1.12
TRAPPC13-202ENST00000399438 SPOCK3Q9BQ16 436 aa8.06□□□□□ -1.12
TRAPPC13-202ENST00000399438 PTPROQ16827 1216 aa8.05□□□□□ -1.12
TRAPPC13-202ENST00000399438 PROCA1Q8NCQ7 364 aaPredicted RBP8.05□□□□□ -1.12
TRAPPC13-202ENST00000399438 DCAF11Q8TEB1 546 aa8.05□□□□□ -1.12
TRAPPC13-202ENST00000399438 IPO4Q8TEX9 1081 aaKnown RBP8.05□□□□□ -1.12
TRAPPC13-202ENST00000399438 TMA7Q9Y2S6 64 aaKnown RBP8.05□□□□□ -1.12
TRAPPC13-202ENST00000399438 ABCC1P33527 1531 aa8.05□□□□□ -1.12
TRAPPC13-202ENST00000399438 PPP1R37O75864 691 aa8.05□□□□□ -1.12
TRAPPC13-202ENST00000399438 FAM69CQ0P6D2 419 aa8.05□□□□□ -1.12
TRAPPC13-202ENST00000399438 MYBPC2Q14324 1141 aa8.05□□□□□ -1.12
TRAPPC13-202ENST00000399438 CHPF2Q9P2E5 772 aa8.05□□□□□ -1.12
TRAPPC13-202ENST00000399438 NUP155O75694 1391 aa8.05□□□□□ -1.12
TRAPPC13-202ENST00000399438 C7P10643 843 aa8.05□□□□□ -1.12
TRAPPC13-202ENST00000399438 GDPD2Q9HCC8 539 aa8.05□□□□□ -1.12
TRAPPC13-202ENST00000399438 FANCAO15360 1455 aa8.04□□□□□ -1.12
TRAPPC13-202ENST00000399438 DNMT1P26358 1616 aaKnown RBP8.04□□□□□ -1.12
TRAPPC13-202ENST00000399438 ARHGEF5Q12774 1597 aa8.04□□□□□ -1.12
TRAPPC13-202ENST00000399438 B4GALNT3Q6L9W6 998 aa8.04□□□□□ -1.12
TRAPPC13-202ENST00000399438 GABBR1Q9UBS5 961 aa8.04□□□□□ -1.12
TRAPPC13-202ENST00000399438 PLEKHH2Q8IVE3 1493 aa8.04□□□□□ -1.12
TRAPPC13-202ENST00000399438 NEO1Q92859 1461 aa8.04□□□□□ -1.12
TRAPPC13-202ENST00000399438 CROCC2H7BZ55 1655 aa8.04□□□□□ -1.12
TRAPPC13-202ENST00000399438 IGBP1P78318 339 aa8.04□□□□□ -1.12
TRAPPC13-202ENST00000399438 NLGN1Q8N2Q7 840 aa8.04□□□□□ -1.12
TRAPPC13-202ENST00000399438 KIAA1107Q9UPP5 1409 aa8.04□□□□□ -1.12
TRAPPC13-202ENST00000399438 GIGYF2Q6Y7W6 1299 aaKnown RBP8.03□□□□□ -1.12
TRAPPC13-202ENST00000399438 REPIN1Q9BWE0 567 aaKnown RBP8.03□□□□□ -1.12
TRAPPC13-202ENST00000399438 ANKRD30BQ9BXX2 1392 aa8.03□□□□□ -1.12
TRAPPC13-202ENST00000399438 hCG_2014768A0A024R1R8 64 aa8.03□□□□□ -1.12
TRAPPC13-202ENST00000399438 CCER2I3L3R5 266 aa8.03□□□□□ -1.12
TRAPPC13-202ENST00000399438 ARID4AP29374 1257 aaPredicted RBP8.03□□□□□ -1.12
TRAPPC13-202ENST00000399438 EFCAB2Q5VUJ9 269 aa8.03□□□□□ -1.12
TRAPPC13-202ENST00000399438 ADAMTS19Q8TE59 1207 aa8.03□□□□□ -1.12
TRAPPC13-202ENST00000399438 PRKRIP1Q9H875 184 aaPredicted RBP8.03□□□□□ -1.12
TRAPPC13-202ENST00000399438 SYCP2Q9BX26 1530 aa8.03□□□□□ -1.12
TRAPPC13-202ENST00000399438 ARHGEF12Q9NZN5 1544 aa8.03□□□□□ -1.12
TRAPPC13-202ENST00000399438 MBD5Q9P267 1494 aa8.03□□□□□ -1.12
TRAPPC13-202ENST00000399438 HMGB1P1B2RPK0 211 aaPredicted RBP8.03□□□□□ -1.12
TRAPPC13-202ENST00000399438 SH3BP5O60239 455 aa8.03□□□□□ -1.12
TRAPPC13-202ENST00000399438 TSPY4P0CV99 314 aa8.03□□□□□ -1.12
TRAPPC13-202ENST00000399438 TSPY10P0CW01 314 aa8.03□□□□□ -1.12
TRAPPC13-202ENST00000399438 TBX22Q9Y458 520 aa8.03□□□□□ -1.12
TRAPPC13-202ENST00000399438 AKNAQ7Z591 1439 aa8.02□□□□□ -1.13
TRAPPC13-202ENST00000399438 TSPOAP1O95153 1857 aa8.02□□□□□ -1.13
TRAPPC13-202ENST00000399438 SDE2Q6IQ49 451 aa8.02□□□□□ -1.13
TRAPPC13-202ENST00000399438 CARD11Q9BXL7 1154 aa8.02□□□□□ -1.13
TRAPPC13-202ENST00000399438 MFRPQ9BY79 579 aa8.02□□□□□ -1.13
TRAPPC13-202ENST00000399438 TEX14Q8IWB6 1497 aa8.02□□□□□ -1.13
TRAPPC13-202ENST00000399438 DCAF8Q5TAQ9 597 aa8.02□□□□□ -1.13
TRAPPC13-202ENST00000399438 RINLQ6ZS11 566 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms