RNA–Protein interactions for RNA: ENST00000399355.6

ITSN1-211, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-211ENST00000399355 MAPK8IP3Q9UPT6 1336 aa15.06■□□□□ 0
ITSN1-211ENST00000399355 HECW2Q9P2P5 1572 aa15.06■□□□□ 0
ITSN1-211ENST00000399355 LNPKQ9C0E8 428 aa15.06■□□□□ 0
ITSN1-211ENST00000399355 MFAP1P55081 439 aaKnown RBP15.06■□□□□ 0
ITSN1-211ENST00000399355 FOXD4L1Q9NU39 408 aa15.06■□□□□ 0
ITSN1-211ENST00000399355 NRXN1Q9ULB1 1477 aa15.05■□□□□ 0
ITSN1-211ENST00000399355 POLKQ9UBT6 870 aa15.05■□□□□ -0
ITSN1-211ENST00000399355 NEXMIFQ5QGS0 1516 aa15.05■□□□□ -0
ITSN1-211ENST00000399355 ANKRD36BQ8N2N9 1353 aa15.05■□□□□ -0
ITSN1-211ENST00000399355 PMFBP1Q8TBY8 1022 aa15.04■□□□□ -0
ITSN1-211ENST00000399355 DIAPH1O60610 1272 aaKnown RBP15.03■□□□□ -0
ITSN1-211ENST00000399355 DIP2CQ9Y2E4 1556 aa15.03■□□□□ -0
ITSN1-211ENST00000399355 NPC1L1Q9UHC9 1359 aa15.03■□□□□ -0
ITSN1-211ENST00000399355 PIK3C2BO00750 1634 aa15.03■□□□□ -0
ITSN1-211ENST00000399355 METP08581 1390 aa15.02■□□□□ -0
ITSN1-211ENST00000399355 ARAP3Q8WWN8 1544 aa15.02■□□□□ -0
ITSN1-211ENST00000399355 DZIP1LQ8IYY4 767 aaKnown RBP15.02■□□□□ -0
ITSN1-211ENST00000399355 NECTIN2Q92692 538 aa15.02■□□□□ -0
ITSN1-211ENST00000399355 ARHGEF28Q8N1W1 1705 aaKnown RBP15.02□□□□□ -0.01
ITSN1-211ENST00000399355 MLH3Q9UHC1 1453 aa15.02□□□□□ -0.01
ITSN1-211ENST00000399355 YTHDC2Q9H6S0 1430 aaKnown RBP15.01□□□□□ -0.01
ITSN1-211ENST00000399355 PHF23Q9BUL5 403 aaPredicted RBP15.01□□□□□ -0.01
ITSN1-211ENST00000399355 CD163L1Q9NR16 1453 aa15.01□□□□□ -0.01
ITSN1-211ENST00000399355 GZF1Q9H116 711 aaPredicted RBP15.01□□□□□ -0.01
ITSN1-211ENST00000399355 FOXO3O43524 673 aa15□□□□□ -0.01
ITSN1-211ENST00000399355 MVPQ14764 893 aaKnown RBP15□□□□□ -0.01
ITSN1-211ENST00000399355 MCM10Q7L590 875 aa15□□□□□ -0.01
ITSN1-211ENST00000399355 PDE3AQ14432 1141 aa15□□□□□ -0.01
ITSN1-211ENST00000399355 IQSEC2Q5JU85 1478 aa14.99□□□□□ -0.01
ITSN1-211ENST00000399355 ZKSCAN2Q63HK3 967 aa14.99□□□□□ -0.01
ITSN1-211ENST00000399355 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.99□□□□□ -0.01
ITSN1-211ENST00000399355 SLC24A1O60721 1099 aa14.99□□□□□ -0.01
ITSN1-211ENST00000399355 C8orf58Q8NAV2 365 aa14.99□□□□□ -0.01
ITSN1-211ENST00000399355 STAC3Q96MF2 364 aa14.99□□□□□ -0.01
ITSN1-211ENST00000399355 TERF2IPQ9NYB0 399 aa14.99□□□□□ -0.01
ITSN1-211ENST00000399355 PTPRMP28827 1452 aa14.99□□□□□ -0.01
ITSN1-211ENST00000399355 SBNO2Q9Y2G9 1366 aa14.98□□□□□ -0.01
ITSN1-211ENST00000399355 ZC3H13Q5T200 1668 aaKnown RBP14.98□□□□□ -0.01
ITSN1-211ENST00000399355 HDGFL2Q7Z4V5 671 aaPredicted RBP14.97□□□□□ -0.01
ITSN1-211ENST00000399355 MYH16Q9H6N6 1097 aa14.97□□□□□ -0.01
ITSN1-211ENST00000399355 KIAA1210Q9ULL0 1709 aa14.97□□□□□ -0.01
ITSN1-211ENST00000399355 ABCC11Q96J66 1382 aa14.97□□□□□ -0.01
ITSN1-211ENST00000399355 HSP90AB2PQ58FF8 381 aa14.96□□□□□ -0.01
ITSN1-211ENST00000399355 RBM42Q9BTD8 480 aaKnown RBP14.96□□□□□ -0.01
ITSN1-211ENST00000399355 SLC52A1Q9NWF4 448 aa14.96□□□□□ -0.01
ITSN1-211ENST00000399355 ZBTB7CA1YPR0 619 aa14.96□□□□□ -0.01
ITSN1-211ENST00000399355 WDR63Q8IWG1 891 aa14.96□□□□□ -0.01
ITSN1-211ENST00000399355 ATF7IPQ6VMQ6 1270 aa14.95□□□□□ -0.02
ITSN1-211ENST00000399355 RSPH6AQ9H0K4 717 aa14.95□□□□□ -0.02
ITSN1-211ENST00000399355 PRR36Q9H6K5 1346 aa14.95□□□□□ -0.02
ITSN1-211ENST00000399355 C16orf71Q8IYS4 520 aaPredicted RBP14.95□□□□□ -0.02
ITSN1-211ENST00000399355 LTV1Q96GA3 475 aaPredicted RBP14.95□□□□□ -0.02
ITSN1-211ENST00000399355 NUDT16Q96DE0 195 aaKnown RBP14.95□□□□□ -0.02
ITSN1-211ENST00000399355 DTNBO60941 627 aa14.94□□□□□ -0.02
ITSN1-211ENST00000399355 MBIPQ9NS73 344 aa14.94□□□□□ -0.02
ITSN1-211ENST00000399355 TBC1D2Q9BYX2 928 aa14.94□□□□□ -0.02
ITSN1-211ENST00000399355 LMTK2Q8IWU2 1503 aa14.93□□□□□ -0.02
ITSN1-211ENST00000399355 RPGRIP1LQ68CZ1 1315 aa14.93□□□□□ -0.02
ITSN1-211ENST00000399355 TSHZ3Q63HK5 1081 aa14.93□□□□□ -0.02
ITSN1-211ENST00000399355 SULT6B1Q6IMI4 303 aa14.93□□□□□ -0.02
ITSN1-211ENST00000399355 OTUD7AQ8TE49 926 aaPredicted RBP14.93□□□□□ -0.02
ITSN1-211ENST00000399355 LTKP29376 864 aa14.93□□□□□ -0.02
ITSN1-211ENST00000399355 ANKRD45Q5TZF3 282 aa14.92□□□□□ -0.02
ITSN1-211ENST00000399355 ESF1Q9H501 851 aaKnown RBP14.92□□□□□ -0.02
ITSN1-211ENST00000399355 MYO3AQ8NEV4 1616 aa14.92□□□□□ -0.02
ITSN1-211ENST00000399355 NLRP1Q9C000 1473 aa14.92□□□□□ -0.02
ITSN1-211ENST00000399355 SETD1BQ9UPS6 1966 aaKnown RBP14.91□□□□□ -0.02
ITSN1-211ENST00000399355 RICTORQ6R327 1708 aa14.91□□□□□ -0.02
ITSN1-211ENST00000399355 SMARCA5O60264 1052 aaPredicted RBP14.91□□□□□ -0.02
ITSN1-211ENST00000399355 CD2BP2O95400 341 aaKnown RBP14.91□□□□□ -0.02
ITSN1-211ENST00000399355 SIRT2Q8IXJ6 389 aa14.91□□□□□ -0.02
ITSN1-211ENST00000399355 SETBP1Q9Y6X0 1596 aa14.91□□□□□ -0.02
ITSN1-211ENST00000399355 DDRGK1Q96HY6 314 aa14.9□□□□□ -0.02
ITSN1-211ENST00000399355 TMEM131LA2VDJ0 1609 aa14.9□□□□□ -0.02
ITSN1-211ENST00000399355 SRCAPQ6ZRS2 3230 aa14.9□□□□□ -0.02
ITSN1-211ENST00000399355 ALKQ9UM73 1620 aa14.9□□□□□ -0.02
ITSN1-211ENST00000399355 F6X3S4 739 aa14.9□□□□□ -0.02
ITSN1-211ENST00000399355 WASLO00401 505 aaPredicted RBP14.9□□□□□ -0.02
ITSN1-211ENST00000399355 PPIP5K1Q6PFW1 1433 aa14.9□□□□□ -0.02
ITSN1-211ENST00000399355 LRRC7Q96NW7 1537 aa14.89□□□□□ -0.03
ITSN1-211ENST00000399355 C14orf37Q86TY3 774 aa14.89□□□□□ -0.03
ITSN1-211ENST00000399355 USHBP1Q8N6Y0 703 aa14.89□□□□□ -0.03
ITSN1-211ENST00000399355 ANO8Q9HCE9 1232 aaPredicted RBP14.89□□□□□ -0.03
ITSN1-211ENST00000399355 MAP2P11137 1827 aaKnown RBP14.89□□□□□ -0.03
ITSN1-211ENST00000399355 CHAMP1Q96JM3 812 aa14.89□□□□□ -0.03
ITSN1-211ENST00000399355 RWDD1Q9H446 243 aaPredicted RBP14.89□□□□□ -0.03
ITSN1-211ENST00000399355 CPS1P31327 1500 aa14.89□□□□□ -0.03
ITSN1-211ENST00000399355 COL3A1P02461 1466 aaPredicted RBP14.88□□□□□ -0.03
ITSN1-211ENST00000399355 PREX1Q8TCU6 1659 aa14.88□□□□□ -0.03
ITSN1-211ENST00000399355 GSE1Q14687 1217 aa14.88□□□□□ -0.03
ITSN1-211ENST00000399355 VAMP4O75379 141 aa14.88□□□□□ -0.03
ITSN1-211ENST00000399355 ZBTB40Q9NUA8 1239 aa14.88□□□□□ -0.03
ITSN1-211ENST00000399355 RIMS2Q9UQ26 1411 aa14.88□□□□□ -0.03
ITSN1-211ENST00000399355 IL13P35225 146 aa14.88□□□□□ -0.03
ITSN1-211ENST00000399355 CLTCQ00610 1675 aaKnown RBP14.87□□□□□ -0.03
ITSN1-211ENST00000399355 XPCQ01831 940 aaPredicted RBP14.87□□□□□ -0.03
ITSN1-211ENST00000399355 SLC4A10Q6U841 1118 aa14.87□□□□□ -0.03
ITSN1-211ENST00000399355 TWISTNBQ3B726 338 aaPredicted RBP14.86□□□□□ -0.03
ITSN1-211ENST00000399355 ARHGEF40Q8TER5 1519 aa14.86□□□□□ -0.03
ITSN1-211ENST00000399355 ROBO2Q9HCK4 1378 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms