RNA–Protein interactions for RNA: ENST00000399158.2

MED28P1-201, Transcript of mediator complex subunit 28 pseudogene 1, humanhuman

BASIC

Gene MED28P1, Length 571 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28P1-201ENST00000399158 ADGRL3Q9HAR2 1447 aa11.69□□□□□ -0.54
MED28P1-201ENST00000399158 ZNF692Q9BU19 519 aaPredicted RBP11.69□□□□□ -0.54
MED28P1-201ENST00000399158 ADAMTS8Q9UP79 889 aa11.69□□□□□ -0.54
MED28P1-201ENST00000399158 SSH2Q76I76 1423 aa11.69□□□□□ -0.54
MED28P1-201ENST00000399158 ACEP12821 1306 aa11.68□□□□□ -0.54
MED28P1-201ENST00000399158 HSPA2P54652 639 aa11.67□□□□□ -0.54
MED28P1-201ENST00000399158 GTF3C3Q9Y5Q9 886 aa11.67□□□□□ -0.54
MED28P1-201ENST00000399158 COL3A1P02461 1466 aaPredicted RBP11.67□□□□□ -0.54
MED28P1-201ENST00000399158 USP6P35125 1406 aa11.67□□□□□ -0.54
MED28P1-201ENST00000399158 NUTM2FA1L443 756 aa11.66□□□□□ -0.54
MED28P1-201ENST00000399158 TNNT2P45379 298 aaPredicted RBP11.66□□□□□ -0.54
MED28P1-201ENST00000399158 MTHFSP49914 203 aa11.66□□□□□ -0.54
MED28P1-201ENST00000399158 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.66□□□□□ -0.54
MED28P1-201ENST00000399158 MAP2P11137 1827 aaKnown RBP11.65□□□□□ -0.54
MED28P1-201ENST00000399158 TTC21BQ7Z4L5 1316 aa11.65□□□□□ -0.54
MED28P1-201ENST00000399158 NME9Q86XW9 330 aa11.65□□□□□ -0.54
MED28P1-201ENST00000399158 SLC4A2P04920 1241 aa11.64□□□□□ -0.55
MED28P1-201ENST00000399158 WDR43Q15061 677 aaKnown RBP eCLIP11.64□□□□□ -0.55
MED28P1-201ENST00000399158 RBM33Q96EV2 1170 aaKnown RBP11.64□□□□□ -0.55
MED28P1-201ENST00000399158 ZRANB1Q9UGI0 708 aa11.64□□□□□ -0.55
MED28P1-201ENST00000399158 USP54Q70EL1 1684 aa11.64□□□□□ -0.55
MED28P1-201ENST00000399158 PNPLA6Q8IY17 1366 aa11.64□□□□□ -0.55
MED28P1-201ENST00000399158 OVOS2A0A0J9YW53 1432 aa11.63□□□□□ -0.55
MED28P1-201ENST00000399158 OVOS2Q6IE36 1432 aa11.63□□□□□ -0.55
MED28P1-201ENST00000399158 SMG6Q86US8 1419 aaKnown RBP11.63□□□□□ -0.55
MED28P1-201ENST00000399158 POTEDQ86YR6 584 aa11.63□□□□□ -0.55
MED28P1-201ENST00000399158 AATKQ6ZMQ8 1374 aa11.63□□□□□ -0.55
MED28P1-201ENST00000399158 MARF1Q9Y4F3 1742 aaKnown RBP11.63□□□□□ -0.55
MED28P1-201ENST00000399158 XIRP1Q702N8 1843 aaKnown RBP11.63□□□□□ -0.55
MED28P1-201ENST00000399158 SENP3-EIF4A1A0A087X0R7 540 aa11.62□□□□□ -0.55
MED28P1-201ENST00000399158 PMFBP1Q8TBY8 1022 aa11.62□□□□□ -0.55
MED28P1-201ENST00000399158 PIK3C2AO00443 1686 aa11.62□□□□□ -0.55
MED28P1-201ENST00000399158 NCOA3Q9Y6Q9 1424 aa11.61□□□□□ -0.55
MED28P1-201ENST00000399158 PROSER2Q86WR7 435 aaPredicted RBP11.61□□□□□ -0.55
MED28P1-201ENST00000399158 CFAP53Q96M91 514 aa11.61□□□□□ -0.55
MED28P1-201ENST00000399158 POLKQ9UBT6 870 aa11.61□□□□□ -0.55
MED28P1-201ENST00000399158 TTC21AQ8NDW8 1320 aa11.6□□□□□ -0.55
MED28P1-201ENST00000399158 USP31Q70CQ4 1352 aa11.6□□□□□ -0.55
MED28P1-201ENST00000399158 FBLN1P23142 703 aa11.6□□□□□ -0.55
MED28P1-201ENST00000399158 FKBP8Q14318 412 aa11.6□□□□□ -0.55
MED28P1-201ENST00000399158 COG3Q96JB2 828 aa11.6□□□□□ -0.55
MED28P1-201ENST00000399158 HOXD11P31277 338 aaPredicted RBP11.59□□□□□ -0.55
MED28P1-201ENST00000399158 NGDNQ8NEJ9 315 aaKnown RBP11.59□□□□□ -0.55
MED28P1-201ENST00000399158 PHF8Q9UPP1 1060 aa11.59□□□□□ -0.55
MED28P1-201ENST00000399158 ZNF521Q96K83 1311 aa11.59□□□□□ -0.55
MED28P1-201ENST00000399158 IQSEC2Q5JU85 1478 aa11.58□□□□□ -0.56
MED28P1-201ENST00000399158 CDK12Q9NYV4 1490 aaPredicted RBP11.58□□□□□ -0.56
MED28P1-201ENST00000399158 TMEM94Q12767 1356 aa11.58□□□□□ -0.56
MED28P1-201ENST00000399158 PDE3BQ13370 1112 aa11.58□□□□□ -0.56
MED28P1-201ENST00000399158 CCDC146Q8IYE0 955 aa11.58□□□□□ -0.56
MED28P1-201ENST00000399158 NUDCQ9Y266 331 aa11.58□□□□□ -0.56
MED28P1-201ENST00000399158 LRRC7Q96NW7 1537 aa11.58□□□□□ -0.56
MED28P1-201ENST00000399158 PEAK1Q9H792 1746 aa11.57□□□□□ -0.56
MED28P1-201ENST00000399158 KIF1AQ12756 1690 aa11.57□□□□□ -0.56
MED28P1-201ENST00000399158 C19orf44Q9H6X5 657 aa11.57□□□□□ -0.56
MED28P1-201ENST00000399158 DMRT2Q9Y5R5 561 aa11.57□□□□□ -0.56
MED28P1-201ENST00000399158 EMILIN1Q9Y6C2 1016 aa11.57□□□□□ -0.56
MED28P1-201ENST00000399158 DCCP43146 1447 aa11.57□□□□□ -0.56
MED28P1-201ENST00000399158 C1orf167Q5SNV9 1468 aa11.57□□□□□ -0.56
MED28P1-201ENST00000399158 APAF1O14727 1248 aa11.56□□□□□ -0.56
MED28P1-201ENST00000399158 MST1RQ04912 1400 aa11.56□□□□□ -0.56
MED28P1-201ENST00000399158 RUNDC1Q96C34 613 aa11.56□□□□□ -0.56
MED28P1-201ENST00000399158 TRPM3Q9HCF6 1732 aaPredicted RBP11.56□□□□□ -0.56
MED28P1-201ENST00000399158 SALL2Q9Y467 1007 aaPredicted RBP11.56□□□□□ -0.56
MED28P1-201ENST00000399158 DIAPH1O60610 1272 aaKnown RBP11.55□□□□□ -0.56
MED28P1-201ENST00000399158 C14orf37Q86TY3 774 aa11.55□□□□□ -0.56
MED28P1-201ENST00000399158 RRS1Q15050 365 aaKnown RBP11.54□□□□□ -0.56
MED28P1-201ENST00000399158 ESCO1Q5FWF5 840 aa11.54□□□□□ -0.56
MED28P1-201ENST00000399158 NGEFQ8N5V2 710 aa11.54□□□□□ -0.56
MED28P1-201ENST00000399158 CDCA7LQ96GN5 454 aa11.54□□□□□ -0.56
MED28P1-201ENST00000399158 PLEKHF1Q96S99 279 aa11.54□□□□□ -0.56
MED28P1-201ENST00000399158 ORAI2Q96SN7 254 aa11.54□□□□□ -0.56
MED28P1-201ENST00000399158 RGPD1P0DJD0 1748 aa11.53□□□□□ -0.56
MED28P1-201ENST00000399158 U2AF1L5P0DN76 240 aaPredicted RBP11.53□□□□□ -0.56
MED28P1-201ENST00000399158 IL13P35225 146 aa11.53□□□□□ -0.56
MED28P1-201ENST00000399158 U2AF1Q01081 240 aaKnown RBP eCLIP11.53□□□□□ -0.56
MED28P1-201ENST00000399158 SUPT16HQ9Y5B9 1047 aaKnown RBP11.53□□□□□ -0.56
MED28P1-201ENST00000399158 MYCNP04198 464 aaPredicted RBP11.52□□□□□ -0.57
MED28P1-201ENST00000399158 TRMT2AQ8IZ69 625 aaKnown RBP11.52□□□□□ -0.57
MED28P1-201ENST00000399158 TCP11L2Q8N4U5 519 aa11.52□□□□□ -0.57
MED28P1-201ENST00000399158 RNF123Q5XPI4 1314 aa11.52□□□□□ -0.57
MED28P1-201ENST00000399158 U2SURPO15042 1029 aaKnown RBP11.51□□□□□ -0.57
MED28P1-201ENST00000399158 ATXN8OSP0DMR3 200 aa11.51□□□□□ -0.57
MED28P1-201ENST00000399158 ALS2Q96Q42 1657 aa11.51□□□□□ -0.57
MED28P1-201ENST00000399158 ZNF335Q9H4Z2 1342 aaPredicted RBP11.51□□□□□ -0.57
MED28P1-201ENST00000399158 PPM1GO15355 546 aaPredicted RBP11.5□□□□□ -0.57
MED28P1-201ENST00000399158 FCHSD2O94868 740 aa11.5□□□□□ -0.57
MED28P1-201ENST00000399158 ATF3P18847 181 aa11.5□□□□□ -0.57
MED28P1-201ENST00000399158 NLRP6P59044 892 aa11.5□□□□□ -0.57
MED28P1-201ENST00000399158 SLFN5Q08AF3 891 aa11.5□□□□□ -0.57
MED28P1-201ENST00000399158 CCDC27Q2M243 656 aa11.5□□□□□ -0.57
MED28P1-201ENST00000399158 MAP3K19Q56UN5 1328 aa11.5□□□□□ -0.57
MED28P1-201ENST00000399158 NFAT5O94916 1531 aa11.5□□□□□ -0.57
MED28P1-201ENST00000399158 LTN1O94822 1766 aa11.49□□□□□ -0.57
MED28P1-201ENST00000399158 FOXO3O43524 673 aa11.49□□□□□ -0.57
MED28P1-201ENST00000399158 PSME1Q06323 249 aa11.49□□□□□ -0.57
MED28P1-201ENST00000399158 GOLGA2Q08379 1002 aa11.49□□□□□ -0.57
MED28P1-201ENST00000399158 CADPS2Q86UW7 1296 aa11.49□□□□□ -0.57
MED28P1-201ENST00000399158 ABTB2Q8N961 1025 aa11.49□□□□□ -0.57
MED28P1-201ENST00000399158 RSPH6AQ9H0K4 717 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms