RNA–Protein interactions for RNA: ENST00000399127.5

COL25A1-202, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-202ENST00000399127 NGEFQ8N5V2 710 aa15.33■□□□□ 0.04
COL25A1-202ENST00000399127 IQSEC2Q5JU85 1478 aa15.33■□□□□ 0.04
COL25A1-202ENST00000399127 ANKLE2Q86XL3 938 aa15.33■□□□□ 0.04
COL25A1-202ENST00000399127 AMOTL2Q9Y2J4 779 aa15.33■□□□□ 0.04
COL25A1-202ENST00000399127 SKAP1Q86WV1 359 aa15.32■□□□□ 0.04
COL25A1-202ENST00000399127 PPIP5K1Q6PFW1 1433 aa15.32■□□□□ 0.04
COL25A1-202ENST00000399127 ROBO2Q9HCK4 1378 aa15.32■□□□□ 0.04
COL25A1-202ENST00000399127 TBX22Q9Y458 520 aa15.32■□□□□ 0.04
COL25A1-202ENST00000399127 NUTM2FA1L443 756 aa15.31■□□□□ 0.04
COL25A1-202ENST00000399127 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.31■□□□□ 0.04
COL25A1-202ENST00000399127 NUDT16Q96DE0 195 aaKnown RBP15.31■□□□□ 0.04
COL25A1-202ENST00000399127 ANKRD26Q9UPS8 1709 aa15.3■□□□□ 0.04
COL25A1-202ENST00000399127 ZRANB1Q9UGI0 708 aa15.3■□□□□ 0.04
COL25A1-202ENST00000399127 KIF20BQ96Q89 1820 aa15.3■□□□□ 0.04
COL25A1-202ENST00000399127 NME9Q86XW9 330 aa15.3■□□□□ 0.04
COL25A1-202ENST00000399127 PTPRUQ92729 1446 aa15.29■□□□□ 0.04
COL25A1-202ENST00000399127 FANCIQ9NVI1 1328 aa15.29■□□□□ 0.04
COL25A1-202ENST00000399127 MED14O60244 1454 aa15.29■□□□□ 0.04
COL25A1-202ENST00000399127 COL3A1P02461 1466 aaPredicted RBP15.29■□□□□ 0.04
COL25A1-202ENST00000399127 SIRT1Q96EB6 747 aa15.29■□□□□ 0.04
COL25A1-202ENST00000399127 PHF23Q9BUL5 403 aaPredicted RBP15.29■□□□□ 0.04
COL25A1-202ENST00000399127 ATP7BP35670 1465 aa15.29■□□□□ 0.04
COL25A1-202ENST00000399127 FAM135BQ49AJ0 1406 aa15.28■□□□□ 0.04
COL25A1-202ENST00000399127 DIAPH1O60610 1272 aaKnown RBP15.28■□□□□ 0.04
COL25A1-202ENST00000399127 TECPR2O15040 1411 aa15.28■□□□□ 0.04
COL25A1-202ENST00000399127 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.27■□□□□ 0.04
COL25A1-202ENST00000399127 CANXP27824 592 aaKnown RBP15.26■□□□□ 0.03
COL25A1-202ENST00000399127 PLEKHF1Q96S99 279 aa15.26■□□□□ 0.03
COL25A1-202ENST00000399127 BCL2L13Q9BXK5 485 aa15.26■□□□□ 0.03
COL25A1-202ENST00000399127 POLKQ9UBT6 870 aa15.26■□□□□ 0.03
COL25A1-202ENST00000399127 CCDC61Q9Y6R9 512 aa15.26■□□□□ 0.03
COL25A1-202ENST00000399127 PRR36Q9H6K5 1346 aa15.26■□□□□ 0.03
COL25A1-202ENST00000399127 MAPK8IP3Q9UPT6 1336 aa15.26■□□□□ 0.03
COL25A1-202ENST00000399127 WDR63Q8IWG1 891 aa15.26■□□□□ 0.03
COL25A1-202ENST00000399127 FRAT1Q92837 279 aaPredicted RBP15.26■□□□□ 0.03
COL25A1-202ENST00000399127 CPS1P31327 1500 aa15.26■□□□□ 0.03
COL25A1-202ENST00000399127 EMILIN1Q9Y6C2 1016 aa15.25■□□□□ 0.03
COL25A1-202ENST00000399127 CPSF1Q10570 1443 aaKnown RBP15.25■□□□□ 0.03
COL25A1-202ENST00000399127 SETD1BQ9UPS6 1966 aaKnown RBP15.25■□□□□ 0.03
COL25A1-202ENST00000399127 KNDC1Q76NI1 1749 aa15.25■□□□□ 0.03
COL25A1-202ENST00000399127 CCDC27Q2M243 656 aa15.25■□□□□ 0.03
COL25A1-202ENST00000399127 KCNA6P17658 529 aa15.24■□□□□ 0.03
COL25A1-202ENST00000399127 TMPOP42166 694 aaKnown RBP15.24■□□□□ 0.03
COL25A1-202ENST00000399127 TSR2Q969E8 191 aaKnown RBP15.24■□□□□ 0.03
COL25A1-202ENST00000399127 PANK1Q8TE04 598 aa15.24■□□□□ 0.03
COL25A1-202ENST00000399127 ADGRB2O60241 1585 aa15.23■□□□□ 0.03
COL25A1-202ENST00000399127 EDC4Q6P2E9 1401 aaKnown RBP15.23■□□□□ 0.03
COL25A1-202ENST00000399127 PNPLA6Q8IY17 1366 aa15.23■□□□□ 0.03
COL25A1-202ENST00000399127 PKNOX2Q96KN3 472 aa15.23■□□□□ 0.03
COL25A1-202ENST00000399127 RARSP54136 660 aaKnown RBP15.22■□□□□ 0.03
COL25A1-202ENST00000399127 TRIM35Q9UPQ4 493 aa15.22■□□□□ 0.03
COL25A1-202ENST00000399127 ZNF142P52746 1687 aaPredicted RBP15.22■□□□□ 0.03
COL25A1-202ENST00000399127 HMOX1P09601 288 aa15.22■□□□□ 0.03
COL25A1-202ENST00000399127 RRS1Q15050 365 aaKnown RBP15.22■□□□□ 0.03
COL25A1-202ENST00000399127 RBM33Q96EV2 1170 aaKnown RBP15.22■□□□□ 0.03
COL25A1-202ENST00000399127 MAP2P11137 1827 aaKnown RBP15.22■□□□□ 0.03
COL25A1-202ENST00000399127 RIPK4P57078 832 aa15.21■□□□□ 0.03
COL25A1-202ENST00000399127 MYH16Q9H6N6 1097 aa15.21■□□□□ 0.03
COL25A1-202ENST00000399127 COG6Q9Y2V7 657 aa15.21■□□□□ 0.03
COL25A1-202ENST00000399127 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.21■□□□□ 0.03
COL25A1-202ENST00000399127 CDC42BPGQ6DT37 1551 aa15.21■□□□□ 0.03
COL25A1-202ENST00000399127 TNNQ9UQP3 1299 aa15.21■□□□□ 0.03
COL25A1-202ENST00000399127 TCERG1O14776 1098 aaKnown RBP15.2■□□□□ 0.02
COL25A1-202ENST00000399127 COG3Q96JB2 828 aa15.2■□□□□ 0.02
COL25A1-202ENST00000399127 KDM2BQ8NHM5 1336 aa15.2■□□□□ 0.02
COL25A1-202ENST00000399127 DIP2AQ14689 1571 aa15.2■□□□□ 0.02
COL25A1-202ENST00000399127 PRKAR2BP31323 418 aa15.2■□□□□ 0.02
COL25A1-202ENST00000399127 LRRC7Q96NW7 1537 aa15.19■□□□□ 0.02
COL25A1-202ENST00000399127 CLUAP1Q96AJ1 413 aa15.18■□□□□ 0.02
COL25A1-202ENST00000399127 NPHP4O75161 1426 aaPredicted RBP15.18■□□□□ 0.02
COL25A1-202ENST00000399127 ACEP12821 1306 aa15.18■□□□□ 0.02
COL25A1-202ENST00000399127 EXOSC9Q06265 439 aaKnown RBP15.17■□□□□ 0.02
COL25A1-202ENST00000399127 CENPQQ7L2Z9 268 aaPredicted RBP15.17■□□□□ 0.02
COL25A1-202ENST00000399127 PHACTR3Q96KR7 559 aa15.17■□□□□ 0.02
COL25A1-202ENST00000399127 RSPH6AQ9H0K4 717 aa15.17■□□□□ 0.02
COL25A1-202ENST00000399127 ITSN1Q15811 1721 aa15.17■□□□□ 0.02
COL25A1-202ENST00000399127 MON2Q7Z3U7 1717 aa15.17■□□□□ 0.02
COL25A1-202ENST00000399127 SOX12O15370 315 aa15.17■□□□□ 0.02
COL25A1-202ENST00000399127 FCHSD2O94868 740 aa15.17■□□□□ 0.02
COL25A1-202ENST00000399127 PDE4AP27815 886 aa15.17■□□□□ 0.02
COL25A1-202ENST00000399127 PDE3AQ14432 1141 aa15.17■□□□□ 0.02
COL25A1-202ENST00000399127 PTCH1Q13635 1447 aa15.17■□□□□ 0.02
COL25A1-202ENST00000399127 RLBP1P12271 317 aa15.16■□□□□ 0.02
COL25A1-202ENST00000399127 HSPA2P54652 639 aa15.16■□□□□ 0.02
COL25A1-202ENST00000399127 PMFBP1Q8TBY8 1022 aa15.16■□□□□ 0.02
COL25A1-202ENST00000399127 ZNF692Q9BU19 519 aaPredicted RBP15.16■□□□□ 0.02
COL25A1-202ENST00000399127 PIK3R4Q99570 1358 aa15.16■□□□□ 0.02
COL25A1-202ENST00000399127 NPM2Q86SE8 214 aaKnown RBP15.16■□□□□ 0.02
COL25A1-202ENST00000399127 AKAP12Q02952 1782 aa15.15■□□□□ 0.02
COL25A1-202ENST00000399127 NCBP3Q53F19 620 aaKnown RBP15.15■□□□□ 0.02
COL25A1-202ENST00000399127 IL27Q8NEV9 243 aa15.15■□□□□ 0.02
COL25A1-202ENST00000399127 KDM4FA0A1W2PPD8 638 aa15.15■□□□□ 0.02
COL25A1-202ENST00000399127 PLEKHG5O94827 1062 aa15.15■□□□□ 0.02
COL25A1-202ENST00000399127 IL13P35225 146 aa15.15■□□□□ 0.02
COL25A1-202ENST00000399127 C14orf37Q86TY3 774 aa15.15■□□□□ 0.02
COL25A1-202ENST00000399127 PNNQ9H307 717 aaKnown RBP15.15■□□□□ 0.02
COL25A1-202ENST00000399127 TTC21BQ7Z4L5 1316 aa15.15■□□□□ 0.02
COL25A1-202ENST00000399127 NEFMP07197 916 aa15.14■□□□□ 0.01
COL25A1-202ENST00000399127 THUMPD2Q9BTF0 503 aaKnown RBP15.14■□□□□ 0.01
COL25A1-202ENST00000399127 LAS1LQ9Y4W2 734 aaKnown RBP15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms