RNA–Protein interactions for RNA: ENST00000398959.2

SRMP1-201, Transcript of spermidine synthase pseudogene 1, humanhuman

BASIC

Gene SRMP1, Length 885 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRMP1-201ENST00000398959 ATP7BP35670 1465 aa16.21■□□□□ 0.19
SRMP1-201ENST00000398959 BLMP54132 1417 aaPredicted RBP16.2■□□□□ 0.18
SRMP1-201ENST00000398959 FAM83GA6ND36 823 aa16.2■□□□□ 0.18
SRMP1-201ENST00000398959 PAK3O75914 559 aaPredicted RBP16.2■□□□□ 0.18
SRMP1-201ENST00000398959 A0A0G2JS52 829 aa16.18■□□□□ 0.18
SRMP1-201ENST00000398959 MYT1Q01538 1121 aa16.18■□□□□ 0.18
SRMP1-201ENST00000398959 BTG4Q9NY30 223 aa16.18■□□□□ 0.18
SRMP1-201ENST00000398959 QRICH2Q9H0J4 1663 aa16.18■□□□□ 0.18
SRMP1-201ENST00000398959 RGPD1P0DJD0 1748 aa16.17■□□□□ 0.18
SRMP1-201ENST00000398959 SF3B2Q13435 895 aaKnown RBP16.17■□□□□ 0.18
SRMP1-201ENST00000398959 NUDT16Q96DE0 195 aaKnown RBP16.17■□□□□ 0.18
SRMP1-201ENST00000398959 KRT27Q7Z3Y8 459 aa16.16■□□□□ 0.18
SRMP1-201ENST00000398959 ONECUT3O60422 494 aaPredicted RBP16.15■□□□□ 0.18
SRMP1-201ENST00000398959 SRCAPQ6ZRS2 3230 aa16.14■□□□□ 0.17
SRMP1-201ENST00000398959 FAM98CQ17RN3 349 aaKnown RBP16.14■□□□□ 0.17
SRMP1-201ENST00000398959 CDK19Q9BWU1 502 aa16.14■□□□□ 0.17
SRMP1-201ENST00000398959 PRDM11Q9NQV5 511 aa16.13■□□□□ 0.17
SRMP1-201ENST00000398959 THSD7AQ9UPZ6 1657 aa16.13■□□□□ 0.17
SRMP1-201ENST00000398959 DEFB132Q7Z7B7 95 aa16.12■□□□□ 0.17
SRMP1-201ENST00000398959 ACEP12821 1306 aa16.11■□□□□ 0.17
SRMP1-201ENST00000398959 POLR3AO14802 1390 aaPredicted RBP16.11■□□□□ 0.17
SRMP1-201ENST00000398959 TNS1Q9HBL0 1735 aaKnown RBP16.11■□□□□ 0.17
SRMP1-201ENST00000398959 NRKQ7Z2Y5 1582 aa16.1■□□□□ 0.17
SRMP1-201ENST00000398959 NUTM2GQ5VZR2 741 aa16.1■□□□□ 0.17
SRMP1-201ENST00000398959 CCDC61Q9Y6R9 512 aa16.1■□□□□ 0.17
SRMP1-201ENST00000398959 SPATA31A5Q5VU36 1347 aa16.1■□□□□ 0.17
SRMP1-201ENST00000398959 SPATA31A7Q8IWB4 1347 aa16.1■□□□□ 0.17
SRMP1-201ENST00000398959 KIAA0232Q92628 1395 aa16.1■□□□□ 0.17
SRMP1-201ENST00000398959 NBPF1Q3BBV0 1214 aa16.09■□□□□ 0.17
SRMP1-201ENST00000398959 TRPM1Q7Z4N2 1603 aa16.08■□□□□ 0.17
SRMP1-201ENST00000398959 NBPF8Q3BBV2 869 aa16.08■□□□□ 0.16
SRMP1-201ENST00000398959 BAG6P46379 1132 aa16.07■□□□□ 0.16
SRMP1-201ENST00000398959 ZC3H6P61129 1189 aaKnown RBP16.07■□□□□ 0.16
SRMP1-201ENST00000398959 SRPK2P78362 688 aaKnown RBP16.07■□□□□ 0.16
SRMP1-201ENST00000398959 CHRNA2Q15822 529 aa16.07■□□□□ 0.16
SRMP1-201ENST00000398959 CENPJQ9HC77 1338 aaPredicted RBP16.07■□□□□ 0.16
SRMP1-201ENST00000398959 PPIP5K1Q6PFW1 1433 aa16.07■□□□□ 0.16
SRMP1-201ENST00000398959 LMO7Q8WWI1 1683 aa16.06■□□□□ 0.16
SRMP1-201ENST00000398959 PLEKHG3A1L390 1219 aa16.06■□□□□ 0.16
SRMP1-201ENST00000398959 ABTB2Q8N961 1025 aa16.06■□□□□ 0.16
SRMP1-201ENST00000398959 STRN4Q9NRL3 753 aa16.06■□□□□ 0.16
SRMP1-201ENST00000398959 LRP5O75197 1615 aa16.05■□□□□ 0.16
SRMP1-201ENST00000398959 SPATA31A1Q5TZJ5 1347 aa16.04■□□□□ 0.16
SRMP1-201ENST00000398959 FAM182BQ5T319 152 aa16.04■□□□□ 0.16
SRMP1-201ENST00000398959 AKAP12Q02952 1782 aa16.04■□□□□ 0.16
SRMP1-201ENST00000398959 EVA1CP58658 441 aa16.03■□□□□ 0.16
SRMP1-201ENST00000398959 CAMTA1Q9Y6Y1 1673 aa16.02■□□□□ 0.16
SRMP1-201ENST00000398959 CABP2Q9NPB3 220 aa16.02■□□□□ 0.16
SRMP1-201ENST00000398959 USP35Q9P2H5 1018 aa16.02■□□□□ 0.16
SRMP1-201ENST00000398959 RGPD5Q99666 1765 aa16.02■□□□□ 0.15
SRMP1-201ENST00000398959 SSH2Q76I76 1423 aa16.02■□□□□ 0.15
SRMP1-201ENST00000398959 PARP4Q9UKK3 1724 aaKnown RBP16.01■□□□□ 0.15
SRMP1-201ENST00000398959 PIK3C2AO00443 1686 aa16.01■□□□□ 0.15
SRMP1-201ENST00000398959 WNK3Q9BYP7 1800 aa16.01■□□□□ 0.15
SRMP1-201ENST00000398959 USP19O94966 1318 aa16■□□□□ 0.15
SRMP1-201ENST00000398959 EN1Q05925 392 aaPredicted RBP16■□□□□ 0.15
SRMP1-201ENST00000398959 NLRP13Q86W25 1043 aa16■□□□□ 0.15
SRMP1-201ENST00000398959 L3MBTL2Q969R5 705 aa16■□□□□ 0.15
SRMP1-201ENST00000398959 CPDO75976 1380 aa16■□□□□ 0.15
SRMP1-201ENST00000398959 BRD4O60885 1362 aaPredicted RBP15.99■□□□□ 0.15
SRMP1-201ENST00000398959 RREB1Q92766 1687 aa15.99■□□□□ 0.15
SRMP1-201ENST00000398959 SBF2Q86WG5 1849 aa15.98■□□□□ 0.15
SRMP1-201ENST00000398959 PSDA5PKW4 1024 aaPredicted RBP15.98■□□□□ 0.15
SRMP1-201ENST00000398959 USP6P35125 1406 aa15.98■□□□□ 0.15
SRMP1-201ENST00000398959 FAM196AQ6ZSG2 479 aa15.98■□□□□ 0.15
SRMP1-201ENST00000398959 EVC2Q86UK5 1308 aa15.97■□□□□ 0.15
SRMP1-201ENST00000398959 DISP2A7MBM2 1401 aa15.97■□□□□ 0.15
SRMP1-201ENST00000398959 GCP02774 474 aa15.97■□□□□ 0.15
SRMP1-201ENST00000398959 LARP1Q6PKG0 1096 aaKnown RBP15.97■□□□□ 0.15
SRMP1-201ENST00000398959 SIN3AQ96ST3 1273 aa15.97■□□□□ 0.15
SRMP1-201ENST00000398959 CABP1Q9NZU7 370 aa15.97■□□□□ 0.15
SRMP1-201ENST00000398959 COL18A1P39060 1754 aa15.97■□□□□ 0.15
SRMP1-201ENST00000398959 COL5A2P05997 1499 aaPredicted RBP15.97■□□□□ 0.15
SRMP1-201ENST00000398959 SLIT3O75094 1523 aa15.96■□□□□ 0.15
SRMP1-201ENST00000398959 ZBTB7CA1YPR0 619 aa15.96■□□□□ 0.15
SRMP1-201ENST00000398959 PDE3BQ13370 1112 aa15.96■□□□□ 0.15
SRMP1-201ENST00000398959 NEUROD1Q13562 356 aa15.96■□□□□ 0.15
SRMP1-201ENST00000398959 BARGINQ6ZT62 677 aa15.96■□□□□ 0.15
SRMP1-201ENST00000398959 ROCK2O75116 1388 aaKnown RBP15.96■□□□□ 0.15
SRMP1-201ENST00000398959 NUP188Q5SRE5 1749 aa15.96■□□□□ 0.15
SRMP1-201ENST00000398959 TRIM37O94972 964 aa15.95■□□□□ 0.14
SRMP1-201ENST00000398959 NLRP6P59044 892 aa15.95■□□□□ 0.14
SRMP1-201ENST00000398959 TCP11L2Q8N4U5 519 aa15.95■□□□□ 0.14
SRMP1-201ENST00000398959 MON2Q7Z3U7 1717 aa15.94■□□□□ 0.14
SRMP1-201ENST00000398959 EZH2Q15910 746 aaKnown RBP15.93■□□□□ 0.14
SRMP1-201ENST00000398959 THRAP3Q9Y2W1 955 aaKnown RBP15.93■□□□□ 0.14
SRMP1-201ENST00000398959 LRRC37A3O60309 1634 aa15.93■□□□□ 0.14
SRMP1-201ENST00000398959 CRB1P82279 1406 aa15.93■□□□□ 0.14
SRMP1-201ENST00000398959 APBA3O96018 575 aa15.92■□□□□ 0.14
SRMP1-201ENST00000398959 LTN1O94822 1766 aa15.92■□□□□ 0.14
SRMP1-201ENST00000398959 R3HDM1Q15032 1099 aaKnown RBP15.91■□□□□ 0.14
SRMP1-201ENST00000398959 PEAK1Q9H792 1746 aa15.91■□□□□ 0.14
SRMP1-201ENST00000398959 RGPD3A6NKT7 1758 aaPredicted RBP15.9■□□□□ 0.14
SRMP1-201ENST00000398959 RGPD4Q7Z3J3 1758 aa15.9■□□□□ 0.14
SRMP1-201ENST00000398959 AATKQ6ZMQ8 1374 aa15.9■□□□□ 0.14
SRMP1-201ENST00000398959 PARD3Q8TEW0 1356 aa15.9■□□□□ 0.14
SRMP1-201ENST00000398959 CAMKK2Q96RR4 588 aa15.9■□□□□ 0.14
SRMP1-201ENST00000398959 ZNF692Q9BU19 519 aaPredicted RBP15.89■□□□□ 0.13
SRMP1-201ENST00000398959 USP54Q70EL1 1684 aa15.88■□□□□ 0.13
SRMP1-201ENST00000398959 CPSF1Q10570 1443 aaKnown RBP15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms