RNA–Protein interactions for RNA: ENST00000398793.6

TOP3B-202, Transcript of DNA topoisomerase III beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3B, Length 3,107 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-202ENST00000398793 PIP4K2BP78356 416 aa17.18■□□□□ 0.34
TOP3B-202ENST00000398793 DCTN1Q14203 1278 aa17.18■□□□□ 0.34
TOP3B-202ENST00000398793 AMPHP49418 695 aa17.18■□□□□ 0.34
TOP3B-202ENST00000398793 AEBP1Q8IUX7 1158 aa17.17■□□□□ 0.34
TOP3B-202ENST00000398793 QRICH2Q9H0J4 1663 aa17.17■□□□□ 0.34
TOP3B-202ENST00000398793 B4GALNT3Q6L9W6 998 aa17.17■□□□□ 0.34
TOP3B-202ENST00000398793 ATAD2Q6PL18 1390 aa17.17■□□□□ 0.34
TOP3B-202ENST00000398793 IQGAP1P46940 1657 aa17.16■□□□□ 0.34
TOP3B-202ENST00000398793 BRD4O60885 1362 aaPredicted RBP17.16■□□□□ 0.34
TOP3B-202ENST00000398793 ANKRD36BQ8N2N9 1353 aa17.16■□□□□ 0.34
TOP3B-202ENST00000398793 HAP1P54257 671 aaPredicted RBP17.16■□□□□ 0.34
TOP3B-202ENST00000398793 TCP11L2Q8N4U5 519 aa17.16■□□□□ 0.34
TOP3B-202ENST00000398793 PHF8Q9UPP1 1060 aa17.16■□□□□ 0.34
TOP3B-202ENST00000398793 NLRP1Q9C000 1473 aa17.15■□□□□ 0.34
TOP3B-202ENST00000398793 USP35Q9P2H5 1018 aa17.15■□□□□ 0.34
TOP3B-202ENST00000398793 POLKQ9UBT6 870 aa17.15■□□□□ 0.34
TOP3B-202ENST00000398793 PPP4R2Q9NY27 417 aa17.14■□□□□ 0.34
TOP3B-202ENST00000398793 SETD1BQ9UPS6 1966 aaKnown RBP17.14■□□□□ 0.33
TOP3B-202ENST00000398793 CHRNA2Q15822 529 aa17.14■□□□□ 0.33
TOP3B-202ENST00000398793 TSR2Q969E8 191 aaKnown RBP17.14■□□□□ 0.33
TOP3B-202ENST00000398793 ZBTB47Q9UFB7 747 aaPredicted RBP17.14■□□□□ 0.33
TOP3B-202ENST00000398793 REREQ9P2R6 1566 aa17.14■□□□□ 0.33
TOP3B-202ENST00000398793 ZNF428Q96B54 188 aa17.14■□□□□ 0.33
TOP3B-202ENST00000398793 TTC21BQ7Z4L5 1316 aa17.13■□□□□ 0.33
TOP3B-202ENST00000398793 DIAPH1O60610 1272 aaKnown RBP17.13■□□□□ 0.33
TOP3B-202ENST00000398793 PRKAR2BP31323 418 aa17.13■□□□□ 0.33
TOP3B-202ENST00000398793 A0A0G2JS52 829 aa17.13■□□□□ 0.33
TOP3B-202ENST00000398793 FAM83GA6ND36 823 aa17.13■□□□□ 0.33
TOP3B-202ENST00000398793 FRAT1Q92837 279 aaPredicted RBP17.13■□□□□ 0.33
TOP3B-202ENST00000398793 ANP32AP39687 249 aaKnown RBP17.12■□□□□ 0.33
TOP3B-202ENST00000398793 IFT172Q9UG01 1749 aa17.12■□□□□ 0.33
TOP3B-202ENST00000398793 ZBED9Q6R2W3 1325 aa17.11■□□□□ 0.33
TOP3B-202ENST00000398793 SULT6B1Q6IMI4 303 aa17.11■□□□□ 0.33
TOP3B-202ENST00000398793 UBR1Q8IWV7 1749 aa17.11■□□□□ 0.33
TOP3B-202ENST00000398793 PHACTR3Q96KR7 559 aa17.11■□□□□ 0.33
TOP3B-202ENST00000398793 NPHP4O75161 1426 aaPredicted RBP17.11■□□□□ 0.33
TOP3B-202ENST00000398793 MAPK8IP3Q9UPT6 1336 aa17.11■□□□□ 0.33
TOP3B-202ENST00000398793 MIS18AQ9NYP9 233 aa17.1■□□□□ 0.33
TOP3B-202ENST00000398793 KDM5AP29375 1690 aaKnown RBP17.1■□□□□ 0.33
TOP3B-202ENST00000398793 CEP170BQ9Y4F5 1589 aaPredicted RBP17.1■□□□□ 0.33
TOP3B-202ENST00000398793 TMEM94Q12767 1356 aa17.1■□□□□ 0.33
TOP3B-202ENST00000398793 CLUAP1Q96AJ1 413 aa17.1■□□□□ 0.33
TOP3B-202ENST00000398793 IPO9Q96P70 1041 aaKnown RBP17.1■□□□□ 0.33
TOP3B-202ENST00000398793 NUDCQ9Y266 331 aa17.1■□□□□ 0.33
TOP3B-202ENST00000398793 LRRC59Q96AG4 307 aaKnown RBP17.09■□□□□ 0.33
TOP3B-202ENST00000398793 SKAP1Q86WV1 359 aa17.08■□□□□ 0.32
TOP3B-202ENST00000398793 BRPF3Q9ULD4 1205 aa17.07■□□□□ 0.32
TOP3B-202ENST00000398793 ARHGEF28Q8N1W1 1705 aaKnown RBP17.07■□□□□ 0.32
TOP3B-202ENST00000398793 RIPK4P57078 832 aa17.07■□□□□ 0.32
TOP3B-202ENST00000398793 NECTIN2Q92692 538 aa17.06■□□□□ 0.32
TOP3B-202ENST00000398793 SBNO2Q9Y2G9 1366 aa17.06■□□□□ 0.32
TOP3B-202ENST00000398793 NEFMP07197 916 aa17.06■□□□□ 0.32
TOP3B-202ENST00000398793 CANXP27824 592 aaKnown RBP17.06■□□□□ 0.32
TOP3B-202ENST00000398793 AEBP2Q6ZN18 517 aaPredicted RBP17.06■□□□□ 0.32
TOP3B-202ENST00000398793 KRT28Q7Z3Y7 464 aa17.06■□□□□ 0.32
TOP3B-202ENST00000398793 BCAR3O75815 825 aa17.05■□□□□ 0.32
TOP3B-202ENST00000398793 NRXN3Q9Y4C0 1643 aa17.04■□□□□ 0.32
TOP3B-202ENST00000398793 SRCAPQ6ZRS2 3230 aa17.04■□□□□ 0.32
TOP3B-202ENST00000398793 C20orf194Q5TEA3 1177 aa17.04■□□□□ 0.32
TOP3B-202ENST00000398793 MAP3K19Q56UN5 1328 aa17.04■□□□□ 0.32
TOP3B-202ENST00000398793 GOLGA2Q08379 1002 aa17.03■□□□□ 0.32
TOP3B-202ENST00000398793 RCAN3Q9UKA8 241 aa17.03■□□□□ 0.32
TOP3B-202ENST00000398793 MYO3AQ8NEV4 1616 aa17.03■□□□□ 0.32
TOP3B-202ENST00000398793 SETBP1Q9Y6X0 1596 aa17.03■□□□□ 0.32
TOP3B-202ENST00000398793 CSB-PGBD3P0DP91 1061 aa17.03■□□□□ 0.32
TOP3B-202ENST00000398793 MCM10Q7L590 875 aa17.03■□□□□ 0.32
TOP3B-202ENST00000398793 ZNF692Q9BU19 519 aaPredicted RBP17.03■□□□□ 0.32
TOP3B-202ENST00000398793 CPS1P31327 1500 aa17.03■□□□□ 0.32
TOP3B-202ENST00000398793 C19orf44Q9H6X5 657 aa17.03■□□□□ 0.32
TOP3B-202ENST00000398793 PODXL2Q9NZ53 605 aa17.03■□□□□ 0.32
TOP3B-202ENST00000398793 NUTM2BA6NNL0 878 aaPredicted RBP17.01■□□□□ 0.31
TOP3B-202ENST00000398793 NUTM2EB1AL46 878 aaPredicted RBP17.01■□□□□ 0.31
TOP3B-202ENST00000398793 NUTM2AQ8IVF1 878 aaPredicted RBP17.01■□□□□ 0.31
TOP3B-202ENST00000398793 CD163L1Q9NR16 1453 aa17.01■□□□□ 0.31
TOP3B-202ENST00000398793 EIF4A2Q14240 407 aaKnown RBP17.01■□□□□ 0.31
TOP3B-202ENST00000398793 STRN4Q9NRL3 753 aa17.01■□□□□ 0.31
TOP3B-202ENST00000398793 TNNQ9UQP3 1299 aa17.01■□□□□ 0.31
TOP3B-202ENST00000398793 GOLGB1Q14789 3259 aaKnown RBP17.01■□□□□ 0.31
TOP3B-202ENST00000398793 KRT24Q2M2I5 525 aa17■□□□□ 0.31
TOP3B-202ENST00000398793 RUNDC1Q96C34 613 aa17■□□□□ 0.31
TOP3B-202ENST00000398793 WWC1Q8IX03 1113 aa17■□□□□ 0.31
TOP3B-202ENST00000398793 EXOC6Q8TAG9 804 aa16.99■□□□□ 0.31
TOP3B-202ENST00000398793 MYOM1P52179 1685 aa16.99■□□□□ 0.31
TOP3B-202ENST00000398793 NKTRP30414 1462 aaKnown RBP16.98■□□□□ 0.31
TOP3B-202ENST00000398793 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.98■□□□□ 0.31
TOP3B-202ENST00000398793 ATP7BP35670 1465 aa16.97■□□□□ 0.31
TOP3B-202ENST00000398793 ADAMTS2O95450 1211 aa16.97■□□□□ 0.31
TOP3B-202ENST00000398793 NLRP2Q9NX02 1062 aa16.97■□□□□ 0.31
TOP3B-202ENST00000398793 LAMC1P11047 1609 aa16.97■□□□□ 0.31
TOP3B-202ENST00000398793 PLEKHG3A1L390 1219 aa16.96■□□□□ 0.31
TOP3B-202ENST00000398793 GLIPR1L2Q4G1C9 344 aa16.96■□□□□ 0.31
TOP3B-202ENST00000398793 TMPOP42166 694 aaKnown RBP16.96■□□□□ 0.31
TOP3B-202ENST00000398793 KIAA1210Q9ULL0 1709 aa16.96■□□□□ 0.31
TOP3B-202ENST00000398793 ARHGAP23Q9P227 1491 aa16.95■□□□□ 0.3
TOP3B-202ENST00000398793 POLR1AO95602 1720 aaPredicted RBP16.95■□□□□ 0.3
TOP3B-202ENST00000398793 VSIG10Q8N0Z9 540 aa16.94■□□□□ 0.3
TOP3B-202ENST00000398793 GCP02774 474 aa16.94■□□□□ 0.3
TOP3B-202ENST00000398793 SLAIN2Q9P270 581 aa16.94■□□□□ 0.3
TOP3B-202ENST00000398793 AXIN2Q9Y2T1 843 aa16.94■□□□□ 0.3
TOP3B-202ENST00000398793 ADAMTSL3P82987 1691 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms