RNA–Protein interactions for RNA: ENST00000398792.3

CDH23-204, Transcript of cadherin related 23, humanhuman

TSL 2

Gene CDH23, Length 1,649 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-204ENST00000398792 CCDC184Q52MB2 194 aa22.6■■□□□ 1.21
CDH23-204ENST00000398792 NLRP13Q86W25 1043 aa22.6■■□□□ 1.21
CDH23-204ENST00000398792 TTC21BQ7Z4L5 1316 aa22.59■■□□□ 1.21
CDH23-204ENST00000398792 MORC1Q86VD1 984 aa22.59■■□□□ 1.21
CDH23-204ENST00000398792 ORAI2Q96SN7 254 aa22.59■■□□□ 1.21
CDH23-204ENST00000398792 GGNBP2Q9H3C7 697 aa22.59■■□□□ 1.21
CDH23-204ENST00000398792 PPP2R1AP30153 589 aa22.58■■□□□ 1.21
CDH23-204ENST00000398792 MRS2Q9HD23 443 aa22.58■■□□□ 1.21
CDH23-204ENST00000398792 PIK3C2AO00443 1686 aa22.58■■□□□ 1.2
CDH23-204ENST00000398792 TTC21AQ8NDW8 1320 aa22.57■■□□□ 1.2
CDH23-204ENST00000398792 NME9Q86XW9 330 aa22.57■■□□□ 1.2
CDH23-204ENST00000398792 USP54Q70EL1 1684 aa22.56■■□□□ 1.2
CDH23-204ENST00000398792 OVOS2A0A0J9YW53 1432 aa22.55■■□□□ 1.2
CDH23-204ENST00000398792 OVOS2Q6IE36 1432 aa22.55■■□□□ 1.2
CDH23-204ENST00000398792 TRPM3Q9HCF6 1732 aaPredicted RBP22.54■■□□□ 1.2
CDH23-204ENST00000398792 MARF1Q9Y4F3 1742 aaKnown RBP22.51■■□□□ 1.19
CDH23-204ENST00000398792 TNNT2P45379 298 aaPredicted RBP22.5■■□□□ 1.19
CDH23-204ENST00000398792 ZRANB1Q9UGI0 708 aa22.5■■□□□ 1.19
CDH23-204ENST00000398792 SCAF1Q9H7N4 1312 aaKnown RBP22.5■■□□□ 1.19
CDH23-204ENST00000398792 USP31Q70CQ4 1352 aa22.5■■□□□ 1.19
CDH23-204ENST00000398792 FOXO3O43524 673 aa22.49■■□□□ 1.19
CDH23-204ENST00000398792 COG3Q96JB2 828 aa22.49■■□□□ 1.19
CDH23-204ENST00000398792 PSME1Q06323 249 aa22.49■■□□□ 1.19
CDH23-204ENST00000398792 SLAIN2Q9P270 581 aa22.48■■□□□ 1.19
CDH23-204ENST00000398792 BRINP3Q76B58 766 aa22.47■■□□□ 1.19
CDH23-204ENST00000398792 PXDNQ92626 1479 aa22.46■■□□□ 1.19
CDH23-204ENST00000398792 ALS2Q96Q42 1657 aa22.46■■□□□ 1.19
CDH23-204ENST00000398792 NPHP3Q7Z494 1330 aa22.45■■□□□ 1.19
CDH23-204ENST00000398792 AATKQ6ZMQ8 1374 aa22.45■■□□□ 1.18
CDH23-204ENST00000398792 SMG6Q86US8 1419 aaKnown RBP22.45■■□□□ 1.18
CDH23-204ENST00000398792 NHSL1Q5SYE7 1610 aa22.45■■□□□ 1.18
CDH23-204ENST00000398792 PAK3O75914 559 aaPredicted RBP22.44■■□□□ 1.18
CDH23-204ENST00000398792 XPCQ01831 940 aaPredicted RBP22.44■■□□□ 1.18
CDH23-204ENST00000398792 KRT28Q7Z3Y7 464 aa22.43■■□□□ 1.18
CDH23-204ENST00000398792 PNISRQ8TF01 805 aaKnown RBP22.43■■□□□ 1.18
CDH23-204ENST00000398792 SHPRHQ149N8 1683 aa22.42■■□□□ 1.18
CDH23-204ENST00000398792 MTHFSP49914 203 aa22.42■■□□□ 1.18
CDH23-204ENST00000398792 ABTB2Q8N961 1025 aa22.42■■□□□ 1.18
CDH23-204ENST00000398792 YTHDC1Q96MU7 727 aaKnown RBP22.42■■□□□ 1.18
CDH23-204ENST00000398792 SBNO1A3KN83 1393 aa22.41■■□□□ 1.18
CDH23-204ENST00000398792 FAM9BQ8IZU0 186 aa22.41■■□□□ 1.18
CDH23-204ENST00000398792 MAP2P11137 1827 aaKnown RBP22.4■■□□□ 1.18
CDH23-204ENST00000398792 ROBO1Q9Y6N7 1651 aa22.4■■□□□ 1.18
CDH23-204ENST00000398792 COL3A1P02461 1466 aaPredicted RBP22.4■■□□□ 1.18
CDH23-204ENST00000398792 DDX17Q92841 729 aaKnown RBP22.4■■□□□ 1.18
CDH23-204ENST00000398792 IQSEC2Q5JU85 1478 aa22.4■■□□□ 1.18
CDH23-204ENST00000398792 CDK12Q9NYV4 1490 aaPredicted RBP22.4■■□□□ 1.18
CDH23-204ENST00000398792 TNS3Q68CZ2 1445 aa22.39■■□□□ 1.18
CDH23-204ENST00000398792 NLRP6P59044 892 aa22.39■■□□□ 1.18
CDH23-204ENST00000398792 SLIT3O75094 1523 aa22.38■■□□□ 1.17
CDH23-204ENST00000398792 NUTM2GQ5VZR2 741 aa22.37■■□□□ 1.17
CDH23-204ENST00000398792 POLKQ9UBT6 870 aa22.37■■□□□ 1.17
CDH23-204ENST00000398792 NFAT5O94916 1531 aa22.36■■□□□ 1.17
CDH23-204ENST00000398792 FBLN1P23142 703 aa22.36■■□□□ 1.17
CDH23-204ENST00000398792 CFAP53Q96M91 514 aa22.36■■□□□ 1.17
CDH23-204ENST00000398792 PNPLA6Q8IY17 1366 aa22.36■■□□□ 1.17
CDH23-204ENST00000398792 PEAK1Q9H792 1746 aa22.35■■□□□ 1.17
CDH23-204ENST00000398792 SOS2Q07890 1332 aaPredicted RBP22.35■■□□□ 1.17
CDH23-204ENST00000398792 AHDC1Q5TGY3 1603 aaPredicted RBP22.35■■□□□ 1.17
CDH23-204ENST00000398792 EMILIN1Q9Y6C2 1016 aa22.35■■□□□ 1.17
CDH23-204ENST00000398792 MED1Q15648 1581 aaPredicted RBP22.35■■□□□ 1.17
CDH23-204ENST00000398792 INSRP06213 1382 aa22.34■■□□□ 1.17
CDH23-204ENST00000398792 RRS1Q15050 365 aaKnown RBP22.34■■□□□ 1.17
CDH23-204ENST00000398792 CRYBG1Q9Y4K1 1723 aa22.33■■□□□ 1.17
CDH23-204ENST00000398792 USP19O94966 1318 aa22.33■■□□□ 1.17
CDH23-204ENST00000398792 PHRF1Q9P1Y6 1649 aaKnown RBP22.33■■□□□ 1.16
CDH23-204ENST00000398792 SPATA31A3Q5VYP0 1347 aa22.33■■□□□ 1.16
CDH23-204ENST00000398792 BLMP54132 1417 aaPredicted RBP22.32■■□□□ 1.16
CDH23-204ENST00000398792 SOX12O15370 315 aa22.31■■□□□ 1.16
CDH23-204ENST00000398792 WDR43Q15061 677 aaKnown RBP eCLIP22.31■■□□□ 1.16
CDH23-204ENST00000398792 ARHGEF10O15013 1369 aa22.31■■□□□ 1.16
CDH23-204ENST00000398792 LTN1O94822 1766 aa22.31■■□□□ 1.16
CDH23-204ENST00000398792 LMOD2Q6P5Q4 547 aa22.31■■□□□ 1.16
CDH23-204ENST00000398792 MAP3K19Q56UN5 1328 aa22.3■■□□□ 1.16
CDH23-204ENST00000398792 PPM1GO15355 546 aaPredicted RBP22.29■■□□□ 1.16
CDH23-204ENST00000398792 KIF24Q5T7B8 1368 aa22.28■■□□□ 1.16
CDH23-204ENST00000398792 TOM1O60784 492 aa22.28■■□□□ 1.16
CDH23-204ENST00000398792 KCNH5Q8NCM2 988 aa22.28■■□□□ 1.16
CDH23-204ENST00000398792 FLT4P35916 1363 aa22.27■■□□□ 1.16
CDH23-204ENST00000398792 ADAMTS8Q9UP79 889 aa22.27■■□□□ 1.16
CDH23-204ENST00000398792 RTL1A6NKG5 1358 aa22.26■■□□□ 1.15
CDH23-204ENST00000398792 ABCA3Q99758 1704 aa22.26■■□□□ 1.15
CDH23-204ENST00000398792 HNRNPUQ00839 825 aaKnown RBP eCLIP22.25■■□□□ 1.15
CDH23-204ENST00000398792 DIAPH1O60610 1272 aaKnown RBP22.24■■□□□ 1.15
CDH23-204ENST00000398792 COL16A1Q07092 1604 aaPredicted RBP22.24■■□□□ 1.15
CDH23-204ENST00000398792 GCP02774 474 aa22.24■■□□□ 1.15
CDH23-204ENST00000398792 CERKQ8TCT0 537 aa22.24■■□□□ 1.15
CDH23-204ENST00000398792 PHLPP1O60346 1717 aa22.23■■□□□ 1.15
CDH23-204ENST00000398792 NUDCQ9Y266 331 aa22.22■■□□□ 1.15
CDH23-204ENST00000398792 UBAP1LF5GYI3 381 aa22.21■■□□□ 1.15
CDH23-204ENST00000398792 RGPD1P0DJD0 1748 aa22.21■■□□□ 1.15
CDH23-204ENST00000398792 AMPHP49418 695 aa22.2■■□□□ 1.15
CDH23-204ENST00000398792 PLEKHG5O94827 1062 aa22.2■■□□□ 1.14
CDH23-204ENST00000398792 IL13P35225 146 aa22.2■■□□□ 1.14
CDH23-204ENST00000398792 COL22A1Q8NFW1 1626 aaPredicted RBP22.19■■□□□ 1.14
CDH23-204ENST00000398792 HOXC9P31274 260 aa22.19■■□□□ 1.14
CDH23-204ENST00000398792 HSP90AB2PQ58FF8 381 aa22.19■■□□□ 1.14
CDH23-204ENST00000398792 U2SURPO15042 1029 aaKnown RBP22.18■■□□□ 1.14
CDH23-204ENST00000398792 U2AF1L5P0DN76 240 aaPredicted RBP22.18■■□□□ 1.14
CDH23-204ENST00000398792 PIP4K2BP78356 416 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms