RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 FAM98CQ17RN3 349 aaKnown RBP19.29■□□□□ 0.68
VCX3A-202ENST00000398729 ITSN1Q15811 1721 aa19.28■□□□□ 0.68
VCX3A-202ENST00000398729 BTG4Q9NY30 223 aa19.28■□□□□ 0.68
VCX3A-202ENST00000398729 NWD2Q9ULI1 1742 aa19.28■□□□□ 0.68
VCX3A-202ENST00000398729 PLCH1Q4KWH8 1693 aa19.27■□□□□ 0.68
VCX3A-202ENST00000398729 TRIM26Q12899 539 aaPredicted RBP19.27■□□□□ 0.68
VCX3A-202ENST00000398729 FAM182BQ5T319 152 aa19.27■□□□□ 0.68
VCX3A-202ENST00000398729 NGDNQ8NEJ9 315 aaKnown RBP19.27■□□□□ 0.68
VCX3A-202ENST00000398729 NUDT16Q96DE0 195 aaKnown RBP19.27■□□□□ 0.68
VCX3A-202ENST00000398729 CDK19Q9BWU1 502 aa19.27■□□□□ 0.68
VCX3A-202ENST00000398729 ATP7BP35670 1465 aa19.27■□□□□ 0.67
VCX3A-202ENST00000398729 BAG6P46379 1132 aa19.26■□□□□ 0.67
VCX3A-202ENST00000398729 EN1Q05925 392 aaPredicted RBP19.26■□□□□ 0.67
VCX3A-202ENST00000398729 TRPM3Q9HCF6 1732 aaPredicted RBP19.25■□□□□ 0.67
VCX3A-202ENST00000398729 CENPJQ9HC77 1338 aaPredicted RBP19.25■□□□□ 0.67
VCX3A-202ENST00000398729 ABCA3Q99758 1704 aa19.23■□□□□ 0.67
VCX3A-202ENST00000398729 LRP5O75197 1615 aa19.23■□□□□ 0.67
VCX3A-202ENST00000398729 TRPM1Q7Z4N2 1603 aa19.23■□□□□ 0.67
VCX3A-202ENST00000398729 A0A0G2JS52 829 aa19.23■□□□□ 0.67
VCX3A-202ENST00000398729 MYT1Q01538 1121 aa19.23■□□□□ 0.67
VCX3A-202ENST00000398729 ALS2Q96Q42 1657 aa19.22■□□□□ 0.67
VCX3A-202ENST00000398729 CCDC61Q9Y6R9 512 aa19.22■□□□□ 0.67
VCX3A-202ENST00000398729 SPATA31A5Q5VU36 1347 aa19.22■□□□□ 0.67
VCX3A-202ENST00000398729 SPATA31A7Q8IWB4 1347 aa19.22■□□□□ 0.67
VCX3A-202ENST00000398729 PAK3O75914 559 aaPredicted RBP19.21■□□□□ 0.67
VCX3A-202ENST00000398729 QRICH2Q9H0J4 1663 aa19.2■□□□□ 0.66
VCX3A-202ENST00000398729 ROCK2O75116 1388 aaKnown RBP19.2■□□□□ 0.66
VCX3A-202ENST00000398729 TOPAZ1Q8N9V7 1692 aa19.2■□□□□ 0.66
VCX3A-202ENST00000398729 NRAPQ86VF7 1730 aa19.2■□□□□ 0.66
VCX3A-202ENST00000398729 SRPK2P78362 688 aaKnown RBP19.19■□□□□ 0.66
VCX3A-202ENST00000398729 R3HDM1Q15032 1099 aaKnown RBP19.19■□□□□ 0.66
VCX3A-202ENST00000398729 POLR3AO14802 1390 aaPredicted RBP19.18■□□□□ 0.66
VCX3A-202ENST00000398729 PLEKHG3A1L390 1219 aa19.17■□□□□ 0.66
VCX3A-202ENST00000398729 EZH2Q15910 746 aaKnown RBP19.17■□□□□ 0.66
VCX3A-202ENST00000398729 ACEP12821 1306 aa19.17■□□□□ 0.66
VCX3A-202ENST00000398729 NBPF8Q3BBV2 869 aa19.16■□□□□ 0.66
VCX3A-202ENST00000398729 CAMKK2Q96RR4 588 aa19.16■□□□□ 0.66
VCX3A-202ENST00000398729 CABP2Q9NPB3 220 aa19.15■□□□□ 0.66
VCX3A-202ENST00000398729 TONSLQ96HA7 1378 aa19.15■□□□□ 0.66
VCX3A-202ENST00000398729 COL14A1Q05707 1796 aaKnown RBP19.14■□□□□ 0.66
VCX3A-202ENST00000398729 PPIP5K1Q6PFW1 1433 aa19.14■□□□□ 0.65
VCX3A-202ENST00000398729 PRDM11Q9NQV5 511 aa19.13■□□□□ 0.65
VCX3A-202ENST00000398729 SPATA31A1Q5TZJ5 1347 aa19.13■□□□□ 0.65
VCX3A-202ENST00000398729 EVC2Q86UK5 1308 aa19.13■□□□□ 0.65
VCX3A-202ENST00000398729 DISP2A7MBM2 1401 aa19.13■□□□□ 0.65
VCX3A-202ENST00000398729 CRYBG1Q9Y4K1 1723 aa19.13■□□□□ 0.65
VCX3A-202ENST00000398729 TRIM37O94972 964 aa19.12■□□□□ 0.65
VCX3A-202ENST00000398729 CHRNA2Q15822 529 aa19.12■□□□□ 0.65
VCX3A-202ENST00000398729 THSD7AQ9UPZ6 1657 aa19.11■□□□□ 0.65
VCX3A-202ENST00000398729 FAM196AQ6ZSG2 479 aa19.1■□□□□ 0.65
VCX3A-202ENST00000398729 KIAA0232Q92628 1395 aa19.09■□□□□ 0.65
VCX3A-202ENST00000398729 RGPD1P0DJD0 1748 aa19.09■□□□□ 0.65
VCX3A-202ENST00000398729 ZC3H6P61129 1189 aaKnown RBP19.09■□□□□ 0.65
VCX3A-202ENST00000398729 PHRF1Q9P1Y6 1649 aaKnown RBP19.08■□□□□ 0.65
VCX3A-202ENST00000398729 NUTM2GQ5VZR2 741 aa19.08■□□□□ 0.64
VCX3A-202ENST00000398729 ABTB2Q8N961 1025 aa19.08■□□□□ 0.64
VCX3A-202ENST00000398729 CARD11Q9BXL7 1154 aa19.08■□□□□ 0.64
VCX3A-202ENST00000398729 STRN4Q9NRL3 753 aa19.08■□□□□ 0.64
VCX3A-202ENST00000398729 CABP1Q9NZU7 370 aa19.08■□□□□ 0.64
VCX3A-202ENST00000398729 BRD4O60885 1362 aaPredicted RBP19.07■□□□□ 0.64
VCX3A-202ENST00000398729 APBA3O96018 575 aa19.07■□□□□ 0.64
VCX3A-202ENST00000398729 TNS1Q9HBL0 1735 aaKnown RBP19.06■□□□□ 0.64
VCX3A-202ENST00000398729 USP35Q9P2H5 1018 aa19.05■□□□□ 0.64
VCX3A-202ENST00000398729 USP6P35125 1406 aa19.04■□□□□ 0.64
VCX3A-202ENST00000398729 NLRP13Q86W25 1043 aa19.04■□□□□ 0.64
VCX3A-202ENST00000398729 SBNO2Q9Y2G9 1366 aa19.04■□□□□ 0.64
VCX3A-202ENST00000398729 BARGINQ6ZT62 677 aa19.03■□□□□ 0.64
VCX3A-202ENST00000398729 LARP1Q6PKG0 1096 aaKnown RBP19.02■□□□□ 0.64
VCX3A-202ENST00000398729 USP19O94966 1318 aa19.01■□□□□ 0.63
VCX3A-202ENST00000398729 EVA1CP58658 441 aa19.01■□□□□ 0.63
VCX3A-202ENST00000398729 NRKQ7Z2Y5 1582 aa19.01■□□□□ 0.63
VCX3A-202ENST00000398729 PDE3BQ13370 1112 aa19■□□□□ 0.63
VCX3A-202ENST00000398729 ZNF692Q9BU19 519 aaPredicted RBP19■□□□□ 0.63
VCX3A-202ENST00000398729 CPDO75976 1380 aa18.99■□□□□ 0.63
VCX3A-202ENST00000398729 PARD3Q8TEW0 1356 aa18.99■□□□□ 0.63
VCX3A-202ENST00000398729 SSH2Q76I76 1423 aa18.99■□□□□ 0.63
VCX3A-202ENST00000398729 CAMTA1Q9Y6Y1 1673 aa18.98■□□□□ 0.63
VCX3A-202ENST00000398729 GCP02774 474 aa18.98■□□□□ 0.63
VCX3A-202ENST00000398729 NLRP6P59044 892 aa18.98■□□□□ 0.63
VCX3A-202ENST00000398729 AKAP12Q02952 1782 aa18.97■□□□□ 0.63
VCX3A-202ENST00000398729 TCP11L2Q8N4U5 519 aa18.97■□□□□ 0.63
VCX3A-202ENST00000398729 NBPF14Q5TI25 921 aa18.95■□□□□ 0.62
VCX3A-202ENST00000398729 TTC21BQ7Z4L5 1316 aa18.95■□□□□ 0.62
VCX3A-202ENST00000398729 PIK3C2AO00443 1686 aa18.95■□□□□ 0.62
VCX3A-202ENST00000398729 CPSF1Q10570 1443 aaKnown RBP18.94■□□□□ 0.62
VCX3A-202ENST00000398729 TTC21AQ8NDW8 1320 aa18.94■□□□□ 0.62
VCX3A-202ENST00000398729 KTN1Q86UP2 1357 aaKnown RBP18.93■□□□□ 0.62
VCX3A-202ENST00000398729 LMO7Q8WWI1 1683 aa18.93■□□□□ 0.62
VCX3A-202ENST00000398729 YY1P25490 414 aa18.93■□□□□ 0.62
VCX3A-202ENST00000398729 THRAP3Q9Y2W1 955 aaKnown RBP18.93■□□□□ 0.62
VCX3A-202ENST00000398729 SLIT3O75094 1523 aa18.93■□□□□ 0.62
VCX3A-202ENST00000398729 RREB1Q92766 1687 aa18.92■□□□□ 0.62
VCX3A-202ENST00000398729 KCNQ2O43526 872 aa18.91■□□□□ 0.62
VCX3A-202ENST00000398729 SLC24A1O60721 1099 aa18.91■□□□□ 0.62
VCX3A-202ENST00000398729 TMC1Q8TDI8 760 aa18.91■□□□□ 0.62
VCX3A-202ENST00000398729 PUS7Q96PZ0 661 aaKnown RBP18.91■□□□□ 0.62
VCX3A-202ENST00000398729 PCGF6Q9BYE7 350 aa18.91■□□□□ 0.62
VCX3A-202ENST00000398729 NUP188Q5SRE5 1749 aa18.91■□□□□ 0.62
VCX3A-202ENST00000398729 MON2Q7Z3U7 1717 aa18.91■□□□□ 0.62
VCX3A-202ENST00000398729 ST20-MTHFSA0A0A6YYL1 179 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms