RNA–Protein interactions for RNA: ENST00000398661.6

HMGCLL1-205, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 2,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-205ENST00000398661 ABCC11Q96J66 1382 aa13.02□□□□□ -0.32
HMGCLL1-205ENST00000398661 AMER1Q5JTC6 1135 aaPredicted RBP13.02□□□□□ -0.33
HMGCLL1-205ENST00000398661 GGNBP2Q9H3C7 697 aa13.02□□□□□ -0.33
HMGCLL1-205ENST00000398661 TBX22Q9Y458 520 aa13.02□□□□□ -0.33
HMGCLL1-205ENST00000398661 PRR36Q9H6K5 1346 aa13.02□□□□□ -0.33
HMGCLL1-205ENST00000398661 SLIT1O75093 1534 aa13.02□□□□□ -0.33
HMGCLL1-205ENST00000398661 WASLO00401 505 aaPredicted RBP13.01□□□□□ -0.33
HMGCLL1-205ENST00000398661 SOX12O15370 315 aa13.01□□□□□ -0.33
HMGCLL1-205ENST00000398661 CLCN1P35523 988 aa13.01□□□□□ -0.33
HMGCLL1-205ENST00000398661 RALBP1Q15311 655 aa13.01□□□□□ -0.33
HMGCLL1-205ENST00000398661 CDCA8Q53HL2 280 aa13.01□□□□□ -0.33
HMGCLL1-205ENST00000398661 NUDT16Q96DE0 195 aaKnown RBP13□□□□□ -0.33
HMGCLL1-205ENST00000398661 XPCQ01831 940 aaPredicted RBP12.99□□□□□ -0.33
HMGCLL1-205ENST00000398661 NSD3Q9BZ95 1437 aa12.99□□□□□ -0.33
HMGCLL1-205ENST00000398661 A0A1W2PP64 1363 aa12.98□□□□□ -0.33
HMGCLL1-205ENST00000398661 C20orf194Q5TEA3 1177 aa12.98□□□□□ -0.33
HMGCLL1-205ENST00000398661 NUTM2GQ5VZR2 741 aa12.98□□□□□ -0.33
HMGCLL1-205ENST00000398661 PODXL2Q9NZ53 605 aa12.98□□□□□ -0.33
HMGCLL1-205ENST00000398661 MED14O60244 1454 aa12.98□□□□□ -0.33
HMGCLL1-205ENST00000398661 MYOM1P52179 1685 aa12.97□□□□□ -0.33
HMGCLL1-205ENST00000398661 NPHP4O75161 1426 aaPredicted RBP12.97□□□□□ -0.33
HMGCLL1-205ENST00000398661 SBNO2Q9Y2G9 1366 aa12.97□□□□□ -0.33
HMGCLL1-205ENST00000398661 DDX17Q92841 729 aaKnown RBP12.96□□□□□ -0.33
HMGCLL1-205ENST00000398661 KDM5AP29375 1690 aaKnown RBP12.96□□□□□ -0.33
HMGCLL1-205ENST00000398661 XRCC6P12956 609 aaKnown RBP eCLIP12.96□□□□□ -0.34
HMGCLL1-205ENST00000398661 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.95□□□□□ -0.34
HMGCLL1-205ENST00000398661 ZNF335Q9H4Z2 1342 aaPredicted RBP12.95□□□□□ -0.34
HMGCLL1-205ENST00000398661 NLRP13Q86W25 1043 aa12.95□□□□□ -0.34
HMGCLL1-205ENST00000398661 PROSER2Q86WR7 435 aaPredicted RBP12.95□□□□□ -0.34
HMGCLL1-205ENST00000398661 NME9Q86XW9 330 aa12.95□□□□□ -0.34
HMGCLL1-205ENST00000398661 GOLGA6L3A6NEY3 463 aa12.94□□□□□ -0.34
HMGCLL1-205ENST00000398661 PPP2R1AP30153 589 aa12.94□□□□□ -0.34
HMGCLL1-205ENST00000398661 RGS3P49796 1198 aa12.94□□□□□ -0.34
HMGCLL1-205ENST00000398661 LMTK3Q96Q04 1460 aa12.93□□□□□ -0.34
HMGCLL1-205ENST00000398661 CCDC61Q9Y6R9 512 aa12.93□□□□□ -0.34
HMGCLL1-205ENST00000398661 PPIP5K1Q6PFW1 1433 aa12.93□□□□□ -0.34
HMGCLL1-205ENST00000398661 FSD2A1L4K1 749 aa12.93□□□□□ -0.34
HMGCLL1-205ENST00000398661 FYB1O15117 783 aa12.93□□□□□ -0.34
HMGCLL1-205ENST00000398661 BECN1Q14457 450 aa12.93□□□□□ -0.34
HMGCLL1-205ENST00000398661 MORC1Q86VD1 984 aa12.93□□□□□ -0.34
HMGCLL1-205ENST00000398661 ORAI2Q96SN7 254 aa12.93□□□□□ -0.34
HMGCLL1-205ENST00000398661 USP19O94966 1318 aa12.92□□□□□ -0.34
HMGCLL1-205ENST00000398661 VIRMAQ69YN4 1812 aaKnown RBP12.92□□□□□ -0.34
HMGCLL1-205ENST00000398661 ARXQ96QS3 562 aa12.92□□□□□ -0.34
HMGCLL1-205ENST00000398661 CD163L1Q9NR16 1453 aa12.92□□□□□ -0.34
HMGCLL1-205ENST00000398661 ACEP12821 1306 aa12.92□□□□□ -0.34
HMGCLL1-205ENST00000398661 PARD3Q8TEW0 1356 aa12.91□□□□□ -0.34
HMGCLL1-205ENST00000398661 SLKQ9H2G2 1235 aaPredicted RBP12.91□□□□□ -0.34
HMGCLL1-205ENST00000398661 ESCO1Q5FWF5 840 aa12.91□□□□□ -0.34
HMGCLL1-205ENST00000398661 PANK2Q9BZ23 570 aa12.91□□□□□ -0.34
HMGCLL1-205ENST00000398661 BLMP54132 1417 aaPredicted RBP12.9□□□□□ -0.34
HMGCLL1-205ENST00000398661 INSRP06213 1382 aa12.9□□□□□ -0.34
HMGCLL1-205ENST00000398661 ZNF142P52746 1687 aaPredicted RBP12.9□□□□□ -0.34
HMGCLL1-205ENST00000398661 TECPR2O15040 1411 aa12.9□□□□□ -0.34
HMGCLL1-205ENST00000398661 FOXO3O43524 673 aa12.9□□□□□ -0.34
HMGCLL1-205ENST00000398661 CCDC146Q8IYE0 955 aa12.9□□□□□ -0.34
HMGCLL1-205ENST00000398661 NGDNQ8NEJ9 315 aaKnown RBP12.9□□□□□ -0.34
HMGCLL1-205ENST00000398661 TERF2IPQ9NYB0 399 aa12.9□□□□□ -0.34
HMGCLL1-205ENST00000398661 HDGFL2Q7Z4V5 671 aaPredicted RBP12.89□□□□□ -0.35
HMGCLL1-205ENST00000398661 ANTXR1Q9H6X2 564 aa12.89□□□□□ -0.35
HMGCLL1-205ENST00000398661 ANKRD36BQ8N2N9 1353 aa12.89□□□□□ -0.35
HMGCLL1-205ENST00000398661 MTHFSP49914 203 aa12.89□□□□□ -0.35
HMGCLL1-205ENST00000398661 RRS1Q15050 365 aaKnown RBP12.89□□□□□ -0.35
HMGCLL1-205ENST00000398661 ATAD2Q6PL18 1390 aa12.89□□□□□ -0.35
HMGCLL1-205ENST00000398661 FAM135BQ49AJ0 1406 aa12.89□□□□□ -0.35
HMGCLL1-205ENST00000398661 LMOD2Q6P5Q4 547 aa12.88□□□□□ -0.35
HMGCLL1-205ENST00000398661 CGNL1Q0VF96 1302 aa12.88□□□□□ -0.35
HMGCLL1-205ENST00000398661 RGPD8O14715 1765 aaPredicted RBP12.88□□□□□ -0.35
HMGCLL1-205ENST00000398661 ADAMTS8Q9UP79 889 aa12.88□□□□□ -0.35
HMGCLL1-205ENST00000398661 CPS1P31327 1500 aa12.87□□□□□ -0.35
HMGCLL1-205ENST00000398661 DLC1Q96QB1 1528 aa12.87□□□□□ -0.35
HMGCLL1-205ENST00000398661 ATP7BP35670 1465 aa12.87□□□□□ -0.35
HMGCLL1-205ENST00000398661 TMEM94Q12767 1356 aa12.87□□□□□ -0.35
HMGCLL1-205ENST00000398661 SLC24A1O60721 1099 aa12.87□□□□□ -0.35
HMGCLL1-205ENST00000398661 NKTRP30414 1462 aaKnown RBP12.86□□□□□ -0.35
HMGCLL1-205ENST00000398661 TPM2P07951 284 aa12.85□□□□□ -0.35
HMGCLL1-205ENST00000398661 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.85□□□□□ -0.35
HMGCLL1-205ENST00000398661 PDCL3Q9H2J4 239 aa12.85□□□□□ -0.35
HMGCLL1-205ENST00000398661 EMILIN1Q9Y6C2 1016 aa12.85□□□□□ -0.35
HMGCLL1-205ENST00000398661 ZBTB7CA1YPR0 619 aa12.85□□□□□ -0.35
HMGCLL1-205ENST00000398661 ESPNB1AK53 854 aa12.85□□□□□ -0.35
HMGCLL1-205ENST00000398661 MRE11P49959 708 aa12.85□□□□□ -0.35
HMGCLL1-205ENST00000398661 SIRT1Q96EB6 747 aa12.85□□□□□ -0.35
HMGCLL1-205ENST00000398661 SEC24BO95487 1268 aa12.84□□□□□ -0.35
HMGCLL1-205ENST00000398661 GZF1Q9H116 711 aaPredicted RBP12.84□□□□□ -0.35
HMGCLL1-205ENST00000398661 PTCH1Q13635 1447 aa12.83□□□□□ -0.36
HMGCLL1-205ENST00000398661 NEUROD2Q15784 382 aa12.83□□□□□ -0.36
HMGCLL1-205ENST00000398661 CHD2O14647 1828 aaKnown RBP12.83□□□□□ -0.36
HMGCLL1-205ENST00000398661 DIP2AQ14689 1571 aa12.83□□□□□ -0.36
HMGCLL1-205ENST00000398661 MCM4P33991 863 aa12.83□□□□□ -0.36
HMGCLL1-205ENST00000398661 STRCP1A6NGW2 1772 aa12.83□□□□□ -0.36
HMGCLL1-205ENST00000398661 XRN1Q8IZH2 1706 aaKnown RBP12.82□□□□□ -0.36
HMGCLL1-205ENST00000398661 STRCQ7RTU9 1775 aa12.82□□□□□ -0.36
HMGCLL1-205ENST00000398661 ERBB4Q15303 1308 aa12.82□□□□□ -0.36
HMGCLL1-205ENST00000398661 CALD1Q05682 793 aaKnown RBP12.82□□□□□ -0.36
HMGCLL1-205ENST00000398661 DUSP27Q5VZP5 1158 aa12.82□□□□□ -0.36
HMGCLL1-205ENST00000398661 MYH16Q9H6N6 1097 aa12.82□□□□□ -0.36
HMGCLL1-205ENST00000398661 RRP7AQ9Y3A4 280 aaKnown RBP12.82□□□□□ -0.36
HMGCLL1-205ENST00000398661 PHF8Q9UPP1 1060 aa12.81□□□□□ -0.36
HMGCLL1-205ENST00000398661 U2SURPO15042 1029 aaKnown RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms