RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 MST1RQ04912 1400 aa25.58■■□□□ 1.68
TSPAN4-204ENST00000397404 ESCO1Q5FWF5 840 aa25.57■■□□□ 1.68
TSPAN4-204ENST00000397404 XIRP1Q702N8 1843 aaKnown RBP25.57■■□□□ 1.68
TSPAN4-204ENST00000397404 COG3Q96JB2 828 aa25.57■■□□□ 1.68
TSPAN4-204ENST00000397404 AATKQ6ZMQ8 1374 aa25.56■■□□□ 1.68
TSPAN4-204ENST00000397404 USP31Q70CQ4 1352 aa25.55■■□□□ 1.68
TSPAN4-204ENST00000397404 PMFBP1Q8TBY8 1022 aa25.55■■□□□ 1.68
TSPAN4-204ENST00000397404 PNISRQ8TF01 805 aaKnown RBP25.55■■□□□ 1.68
TSPAN4-204ENST00000397404 RBM33Q96EV2 1170 aaKnown RBP25.55■■□□□ 1.68
TSPAN4-204ENST00000397404 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.54■■□□□ 1.68
TSPAN4-204ENST00000397404 CFAP53Q96M91 514 aa25.54■■□□□ 1.68
TSPAN4-204ENST00000397404 GGNBP2Q9H3C7 697 aa25.53■■□□□ 1.68
TSPAN4-204ENST00000397404 USP54Q70EL1 1684 aa25.53■■□□□ 1.68
TSPAN4-204ENST00000397404 CENPBP07199 599 aaPredicted RBP25.51■■□□□ 1.67
TSPAN4-204ENST00000397404 OVOS2A0A0J9YW53 1432 aa25.51■■□□□ 1.67
TSPAN4-204ENST00000397404 OVOS2Q6IE36 1432 aa25.51■■□□□ 1.67
TSPAN4-204ENST00000397404 PSME1Q06323 249 aa25.5■■□□□ 1.67
TSPAN4-204ENST00000397404 CCDC184Q52MB2 194 aa25.5■■□□□ 1.67
TSPAN4-204ENST00000397404 AEBP2Q6ZN18 517 aaPredicted RBP25.5■■□□□ 1.67
TSPAN4-204ENST00000397404 NPHP3Q7Z494 1330 aa25.47■■□□□ 1.67
TSPAN4-204ENST00000397404 SMG6Q86US8 1419 aaKnown RBP25.47■■□□□ 1.67
TSPAN4-204ENST00000397404 NME9Q86XW9 330 aa25.47■■□□□ 1.67
TSPAN4-204ENST00000397404 FAM9BQ8IZU0 186 aa25.46■■□□□ 1.67
TSPAN4-204ENST00000397404 LTBP4Q8N2S1 1624 aa25.45■■□□□ 1.67
TSPAN4-204ENST00000397404 WDR43Q15061 677 aaKnown RBP eCLIP25.45■■□□□ 1.66
TSPAN4-204ENST00000397404 MTHFSP49914 203 aa25.44■■□□□ 1.66
TSPAN4-204ENST00000397404 ORAI2Q96SN7 254 aa25.44■■□□□ 1.66
TSPAN4-204ENST00000397404 KIF24Q5T7B8 1368 aa25.43■■□□□ 1.66
TSPAN4-204ENST00000397404 PNPLA6Q8IY17 1366 aa25.43■■□□□ 1.66
TSPAN4-204ENST00000397404 SBNO1A3KN83 1393 aa25.42■■□□□ 1.66
TSPAN4-204ENST00000397404 PIK3C2AO00443 1686 aa25.42■■□□□ 1.66
TSPAN4-204ENST00000397404 YTHDC1Q96MU7 727 aaKnown RBP25.42■■□□□ 1.66
TSPAN4-204ENST00000397404 SLAIN2Q9P270 581 aa25.42■■□□□ 1.66
TSPAN4-204ENST00000397404 TNNT2P45379 298 aaPredicted RBP25.4■■□□□ 1.66
TSPAN4-204ENST00000397404 ABTB2Q8N961 1025 aa25.4■■□□□ 1.66
TSPAN4-204ENST00000397404 CDK12Q9NYV4 1490 aaPredicted RBP25.4■■□□□ 1.66
TSPAN4-204ENST00000397404 NUDCQ9Y266 331 aa25.4■■□□□ 1.66
TSPAN4-204ENST00000397404 FOXO3O43524 673 aa25.39■■□□□ 1.65
TSPAN4-204ENST00000397404 NLRP6P59044 892 aa25.38■■□□□ 1.65
TSPAN4-204ENST00000397404 KRT28Q7Z3Y7 464 aa25.38■■□□□ 1.65
TSPAN4-204ENST00000397404 KCNH5Q8NCM2 988 aa25.38■■□□□ 1.65
TSPAN4-204ENST00000397404 TRPM3Q9HCF6 1732 aaPredicted RBP25.38■■□□□ 1.65
TSPAN4-204ENST00000397404 PAK3O75914 559 aaPredicted RBP25.37■■□□□ 1.65
TSPAN4-204ENST00000397404 NGEFQ8N5V2 710 aa25.37■■□□□ 1.65
TSPAN4-204ENST00000397404 POLKQ9UBT6 870 aa25.37■■□□□ 1.65
TSPAN4-204ENST00000397404 MAP2P11137 1827 aaKnown RBP25.37■■□□□ 1.65
TSPAN4-204ENST00000397404 IQSEC2Q5JU85 1478 aa25.37■■□□□ 1.65
TSPAN4-204ENST00000397404 BLMP54132 1417 aaPredicted RBP25.36■■□□□ 1.65
TSPAN4-204ENST00000397404 BRINP3Q76B58 766 aa25.34■■□□□ 1.65
TSPAN4-204ENST00000397404 ARHGEF10O15013 1369 aa25.34■■□□□ 1.65
TSPAN4-204ENST00000397404 HNRNPUQ00839 825 aaKnown RBP eCLIP25.34■■□□□ 1.65
TSPAN4-204ENST00000397404 PNNQ9H307 717 aaKnown RBP25.34■■□□□ 1.65
TSPAN4-204ENST00000397404 ZBED9Q6R2W3 1325 aa25.33■■□□□ 1.65
TSPAN4-204ENST00000397404 COL3A1P02461 1466 aaPredicted RBP25.32■■□□□ 1.64
TSPAN4-204ENST00000397404 PXDNQ92626 1479 aa25.32■■□□□ 1.64
TSPAN4-204ENST00000397404 DIAPH1O60610 1272 aaKnown RBP25.31■■□□□ 1.64
TSPAN4-204ENST00000397404 TNS3Q68CZ2 1445 aa25.31■■□□□ 1.64
TSPAN4-204ENST00000397404 ALS2Q96Q42 1657 aa25.31■■□□□ 1.64
TSPAN4-204ENST00000397404 RTL1A6NKG5 1358 aa25.3■■□□□ 1.64
TSPAN4-204ENST00000397404 SHPRHQ149N8 1683 aa25.3■■□□□ 1.64
TSPAN4-204ENST00000397404 SLIT3O75094 1523 aa25.29■■□□□ 1.64
TSPAN4-204ENST00000397404 ZRANB1Q9UGI0 708 aa25.29■■□□□ 1.64
TSPAN4-204ENST00000397404 ADAMTS8Q9UP79 889 aa25.29■■□□□ 1.64
TSPAN4-204ENST00000397404 MARF1Q9Y4F3 1742 aaKnown RBP25.29■■□□□ 1.64
TSPAN4-204ENST00000397404 USP19O94966 1318 aa25.29■■□□□ 1.64
TSPAN4-204ENST00000397404 NCBP3Q53F19 620 aaKnown RBP25.28■■□□□ 1.64
TSPAN4-204ENST00000397404 FLT4P35916 1363 aa25.28■■□□□ 1.64
TSPAN4-204ENST00000397404 SOS2Q07890 1332 aaPredicted RBP25.28■■□□□ 1.64
TSPAN4-204ENST00000397404 NHSL1Q5SYE7 1610 aa25.26■■□□□ 1.63
TSPAN4-204ENST00000397404 PHRF1Q9P1Y6 1649 aaKnown RBP25.26■■□□□ 1.63
TSPAN4-204ENST00000397404 SPATA31A3Q5VYP0 1347 aa25.25■■□□□ 1.63
TSPAN4-204ENST00000397404 MED1Q15648 1581 aaPredicted RBP25.25■■□□□ 1.63
TSPAN4-204ENST00000397404 EMILIN1Q9Y6C2 1016 aa25.24■■□□□ 1.63
TSPAN4-204ENST00000397404 NFAT5O94916 1531 aa25.24■■□□□ 1.63
TSPAN4-204ENST00000397404 TOM1O60784 492 aa25.23■■□□□ 1.63
TSPAN4-204ENST00000397404 RRS1Q15050 365 aaKnown RBP25.22■■□□□ 1.63
TSPAN4-204ENST00000397404 PPM1GO15355 546 aaPredicted RBP25.21■■□□□ 1.63
TSPAN4-204ENST00000397404 MAP3K19Q56UN5 1328 aa25.21■■□□□ 1.63
TSPAN4-204ENST00000397404 ABCC6O95255 1503 aa25.21■■□□□ 1.63
TSPAN4-204ENST00000397404 AMPHP49418 695 aa25.21■■□□□ 1.63
TSPAN4-204ENST00000397404 AHDC1Q5TGY3 1603 aaPredicted RBP25.2■■□□□ 1.63
TSPAN4-204ENST00000397404 FCHSD2O94868 740 aa25.2■■□□□ 1.62
TSPAN4-204ENST00000397404 GCP02774 474 aa25.2■■□□□ 1.62
TSPAN4-204ENST00000397404 U2AF1L5P0DN76 240 aaPredicted RBP25.2■■□□□ 1.62
TSPAN4-204ENST00000397404 U2AF1Q01081 240 aaKnown RBP eCLIP25.2■■□□□ 1.62
TSPAN4-204ENST00000397404 RUNDC1Q96C34 613 aa25.2■■□□□ 1.62
TSPAN4-204ENST00000397404 PDE3BQ13370 1112 aa25.19■■□□□ 1.62
TSPAN4-204ENST00000397404 NEFMP07197 916 aa25.18■■□□□ 1.62
TSPAN4-204ENST00000397404 IL13P35225 146 aa25.18■■□□□ 1.62
TSPAN4-204ENST00000397404 XPCQ01831 940 aaPredicted RBP25.18■■□□□ 1.62
TSPAN4-204ENST00000397404 LMOD2Q6P5Q4 547 aa25.17■■□□□ 1.62
TSPAN4-204ENST00000397404 ROBO1Q9Y6N7 1651 aa25.16■■□□□ 1.62
TSPAN4-204ENST00000397404 U2SURPO15042 1029 aaKnown RBP25.15■■□□□ 1.62
TSPAN4-204ENST00000397404 NUTM2GQ5VZR2 741 aa25.15■■□□□ 1.62
TSPAN4-204ENST00000397404 PEAK1Q9H792 1746 aa25.15■■□□□ 1.62
TSPAN4-204ENST00000397404 IP6K1Q92551 441 aa25.15■■□□□ 1.62
TSPAN4-204ENST00000397404 LTN1O94822 1766 aa25.14■■□□□ 1.62
TSPAN4-204ENST00000397404 HOXC9P31274 260 aa25.14■■□□□ 1.61
TSPAN4-204ENST00000397404 ARHGEF25Q86VW2 580 aa25.14■■□□□ 1.61
TSPAN4-204ENST00000397404 LRRC59Q96AG4 307 aaKnown RBP25.14■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms