RNA–Protein interactions for RNA: ENST00000397081.7

RAPGEF4-201, Transcript of Rap guanine nucleotide exchange factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAPGEF4, Length 4,299 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4-201ENST00000397081 POGZQ7Z3K3 1410 aa18.26■□□□□ 0.51
RAPGEF4-201ENST00000397081 NASPP49321 788 aaPredicted RBP18.26■□□□□ 0.51
RAPGEF4-201ENST00000397081 NINLQ9Y2I6 1382 aa18.26■□□□□ 0.51
RAPGEF4-201ENST00000397081 TSPOAP1O95153 1857 aa18.25■□□□□ 0.51
RAPGEF4-201ENST00000397081 RNF214Q8ND24 703 aa18.25■□□□□ 0.51
RAPGEF4-201ENST00000397081 KIF16BQ96L93 1317 aa18.25■□□□□ 0.51
RAPGEF4-201ENST00000397081 NOS1P29475 1434 aa18.24■□□□□ 0.51
RAPGEF4-201ENST00000397081 DCTN1Q14203 1278 aa18.24■□□□□ 0.51
RAPGEF4-201ENST00000397081 STAC3Q96MF2 364 aa18.24■□□□□ 0.51
RAPGEF4-201ENST00000397081 ABCA9Q8IUA7 1624 aa18.24■□□□□ 0.51
RAPGEF4-201ENST00000397081 CASC1Q6TDU7 716 aa18.23■□□□□ 0.51
RAPGEF4-201ENST00000397081 FAM13BQ9NYF5 915 aa18.23■□□□□ 0.51
RAPGEF4-201ENST00000397081 YEATS2Q9ULM3 1422 aa18.23■□□□□ 0.51
RAPGEF4-201ENST00000397081 PRAM1Q96QH2 718 aa18.23■□□□□ 0.51
RAPGEF4-201ENST00000397081 TRPM1Q7Z4N2 1603 aa18.23■□□□□ 0.51
RAPGEF4-201ENST00000397081 MAST1Q9Y2H9 1570 aa18.23■□□□□ 0.51
RAPGEF4-201ENST00000397081 AAMPQ13685 434 aa18.22■□□□□ 0.51
RAPGEF4-201ENST00000397081 CABP1Q9NZU7 370 aa18.22■□□□□ 0.51
RAPGEF4-201ENST00000397081 VGFO15240 615 aaPredicted RBP18.22■□□□□ 0.51
RAPGEF4-201ENST00000397081 NECTIN2Q92692 538 aa18.21■□□□□ 0.51
RAPGEF4-201ENST00000397081 POLR3AO14802 1390 aaPredicted RBP18.21■□□□□ 0.5
RAPGEF4-201ENST00000397081 INSRP06213 1382 aa18.21■□□□□ 0.5
RAPGEF4-201ENST00000397081 K7ELQ4 463 aaPredicted RBP18.2■□□□□ 0.5
RAPGEF4-201ENST00000397081 PRPF40AO75400 957 aaKnown RBP18.2■□□□□ 0.5
RAPGEF4-201ENST00000397081 RIMBP3CA6NJZ7 1639 aa18.2■□□□□ 0.5
RAPGEF4-201ENST00000397081 RIMBP3BA6NNM3 1639 aa18.2■□□□□ 0.5
RAPGEF4-201ENST00000397081 RIMBP3Q9UFD9 1639 aa18.2■□□□□ 0.5
RAPGEF4-201ENST00000397081 PRDM15P57071 1507 aaPredicted RBP18.2■□□□□ 0.5
RAPGEF4-201ENST00000397081 PLXNC1O60486 1568 aa18.2■□□□□ 0.5
RAPGEF4-201ENST00000397081 IDI1Q13907 227 aa18.2■□□□□ 0.5
RAPGEF4-201ENST00000397081 R3HCC1Q9Y3T6 440 aaKnown RBP18.2■□□□□ 0.5
RAPGEF4-201ENST00000397081 TBC1D9Q6ZT07 1266 aa18.19■□□□□ 0.5
RAPGEF4-201ENST00000397081 SMARCA5O60264 1052 aaPredicted RBP18.19■□□□□ 0.5
RAPGEF4-201ENST00000397081 UGGT1Q9NYU2 1555 aa18.18■□□□□ 0.5
RAPGEF4-201ENST00000397081 SKOR2Q2VWA4 1001 aaPredicted RBP18.18■□□□□ 0.5
RAPGEF4-201ENST00000397081 GAS2L3Q86XJ1 694 aa18.18■□□□□ 0.5
RAPGEF4-201ENST00000397081 TSPYL6Q8N831 410 aa18.18■□□□□ 0.5
RAPGEF4-201ENST00000397081 TRIM6-TRIM34B2RNG4 842 aa18.18■□□□□ 0.5
RAPGEF4-201ENST00000397081 C16orf71Q8IYS4 520 aaPredicted RBP18.17■□□□□ 0.5
RAPGEF4-201ENST00000397081 CD2BP2O95400 341 aaKnown RBP18.17■□□□□ 0.5
RAPGEF4-201ENST00000397081 KIAA1211Q6ZU35 1233 aa18.17■□□□□ 0.5
RAPGEF4-201ENST00000397081 GAS2L2Q8NHY3 880 aa18.17■□□□□ 0.5
RAPGEF4-201ENST00000397081 CHMP4BQ9H444 224 aaKnown RBP18.17■□□□□ 0.5
RAPGEF4-201ENST00000397081 FAM83GA6ND36 823 aa18.17■□□□□ 0.5
RAPGEF4-201ENST00000397081 TWISTNBQ3B726 338 aaPredicted RBP18.17■□□□□ 0.5
RAPGEF4-201ENST00000397081 ARAP3Q8WWN8 1544 aa18.16■□□□□ 0.5
RAPGEF4-201ENST00000397081 CDC45O75419 566 aa18.16■□□□□ 0.5
RAPGEF4-201ENST00000397081 RILPL2Q969X0 211 aa18.16■□□□□ 0.5
RAPGEF4-201ENST00000397081 ATAD2Q6PL18 1390 aa18.16■□□□□ 0.5
RAPGEF4-201ENST00000397081 CLCN1P35523 988 aa18.16■□□□□ 0.5
RAPGEF4-201ENST00000397081 EIF2AK4Q9P2K8 1649 aaKnown RBP18.16■□□□□ 0.5
RAPGEF4-201ENST00000397081 CHAMP1Q96JM3 812 aa18.15■□□□□ 0.5
RAPGEF4-201ENST00000397081 RRS1Q15050 365 aaKnown RBP18.15■□□□□ 0.5
RAPGEF4-201ENST00000397081 ZBTB40Q9NUA8 1239 aa18.15■□□□□ 0.5
RAPGEF4-201ENST00000397081 ATP10AO60312 1499 aa18.15■□□□□ 0.5
RAPGEF4-201ENST00000397081 HDAC1Q13547 482 aaPredicted RBP18.15■□□□□ 0.5
RAPGEF4-201ENST00000397081 TRIM35Q9UPQ4 493 aa18.15■□□□□ 0.5
RAPGEF4-201ENST00000397081 NUCB1Q02818 461 aa18.14■□□□□ 0.49
RAPGEF4-201ENST00000397081 NEO1Q92859 1461 aa18.14■□□□□ 0.49
RAPGEF4-201ENST00000397081 RBM27Q9P2N5 1060 aaKnown RBP18.14■□□□□ 0.49
RAPGEF4-201ENST00000397081 ST18O60284 1047 aa18.13■□□□□ 0.49
RAPGEF4-201ENST00000397081 SMC5Q8IY18 1101 aa18.13■□□□□ 0.49
RAPGEF4-201ENST00000397081 EMILIN1Q9Y6C2 1016 aa18.13■□□□□ 0.49
RAPGEF4-201ENST00000397081 TSHZ3Q63HK5 1081 aa18.12■□□□□ 0.49
RAPGEF4-201ENST00000397081 C14orf93Q9H972 538 aaKnown RBP18.12■□□□□ 0.49
RAPGEF4-201ENST00000397081 FYB1O15117 783 aa18.12■□□□□ 0.49
RAPGEF4-201ENST00000397081 MIS18AQ9NYP9 233 aa18.12■□□□□ 0.49
RAPGEF4-201ENST00000397081 UNC13BO14795 1591 aa18.12■□□□□ 0.49
RAPGEF4-201ENST00000397081 PHACTR3Q96KR7 559 aa18.12■□□□□ 0.49
RAPGEF4-201ENST00000397081 WAPLQ7Z5K2 1190 aa18.11■□□□□ 0.49
RAPGEF4-201ENST00000397081 PKNOX2Q96KN3 472 aa18.11■□□□□ 0.49
RAPGEF4-201ENST00000397081 CDK19Q9BWU1 502 aa18.11■□□□□ 0.49
RAPGEF4-201ENST00000397081 ERVK-7P63135 1459 aa18.11■□□□□ 0.49
RAPGEF4-201ENST00000397081 KRT24Q2M2I5 525 aa18.11■□□□□ 0.49
RAPGEF4-201ENST00000397081 IQGAP3Q86VI3 1631 aa18.11■□□□□ 0.49
RAPGEF4-201ENST00000397081 NPC1L1Q9UHC9 1359 aa18.1■□□□□ 0.49
RAPGEF4-201ENST00000397081 CEBPAP49715 358 aaPredicted RBP18.1■□□□□ 0.49
RAPGEF4-201ENST00000397081 XPCQ01831 940 aaPredicted RBP18.1■□□□□ 0.49
RAPGEF4-201ENST00000397081 NPATQ14207 1427 aa18.1■□□□□ 0.49
RAPGEF4-201ENST00000397081 NEK4P51957 841 aa18.1■□□□□ 0.49
RAPGEF4-201ENST00000397081 C14orf37Q86TY3 774 aa18.1■□□□□ 0.49
RAPGEF4-201ENST00000397081 GCC1Q96CN9 775 aa18.1■□□□□ 0.49
RAPGEF4-201ENST00000397081 BAG4O95429 457 aaKnown RBP18.09■□□□□ 0.49
RAPGEF4-201ENST00000397081 GNAI1P63096 354 aa18.09■□□□□ 0.49
RAPGEF4-201ENST00000397081 OTUD7AQ8TE49 926 aaPredicted RBP18.09■□□□□ 0.49
RAPGEF4-201ENST00000397081 PTPRTO14522 1441 aa18.09■□□□□ 0.49
RAPGEF4-201ENST00000397081 CCDC27Q2M243 656 aa18.09■□□□□ 0.49
RAPGEF4-201ENST00000397081 ANO2Q9NQ90 1003 aa18.09■□□□□ 0.49
RAPGEF4-201ENST00000397081 ERBB4Q15303 1308 aa18.08■□□□□ 0.49
RAPGEF4-201ENST00000397081 BMP2KLQ5H9B9 411 aa18.08■□□□□ 0.49
RAPGEF4-201ENST00000397081 MLH3Q9UHC1 1453 aa18.08■□□□□ 0.48
RAPGEF4-201ENST00000397081 FSD2A1L4K1 749 aa18.08■□□□□ 0.48
RAPGEF4-201ENST00000397081 ZRANB1Q9UGI0 708 aa18.08■□□□□ 0.48
RAPGEF4-201ENST00000397081 ZMYND15Q9H091 742 aa18.08■□□□□ 0.48
RAPGEF4-201ENST00000397081 HECW2Q9P2P5 1572 aa18.07■□□□□ 0.48
RAPGEF4-201ENST00000397081 CT47B1P0C2W7 299 aaPredicted RBP18.07■□□□□ 0.48
RAPGEF4-201ENST00000397081 E9PCH4 1651 aa18.07■□□□□ 0.48
RAPGEF4-201ENST00000397081 SYCE3A1L190 88 aa18.07■□□□□ 0.48
RAPGEF4-201ENST00000397081 SLC52A1Q9NWF4 448 aa18.07■□□□□ 0.48
RAPGEF4-201ENST00000397081 PTMSP20962 102 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms