RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 TOPAZ1Q8N9V7 1692 aa26.31■■□□□ 1.8
FXN-203ENST00000396366 NBPF8Q3BBV2 869 aa26.31■■□□□ 1.8
FXN-203ENST00000396366 PLEKHG3A1L390 1219 aa26.3■■□□□ 1.8
FXN-203ENST00000396366 SRPK2P78362 688 aaKnown RBP26.3■■□□□ 1.8
FXN-203ENST00000396366 QRICH2Q9H0J4 1663 aa26.3■■□□□ 1.8
FXN-203ENST00000396366 NUTM2GQ5VZR2 741 aa26.29■■□□□ 1.8
FXN-203ENST00000396366 VPS72Q15906 364 aa26.28■■□□□ 1.8
FXN-203ENST00000396366 POLR3AO14802 1390 aaPredicted RBP26.28■■□□□ 1.8
FXN-203ENST00000396366 CRYBG1Q9Y4K1 1723 aa26.28■■□□□ 1.8
FXN-203ENST00000396366 ATAD2Q6PL18 1390 aa26.27■■□□□ 1.8
FXN-203ENST00000396366 NWD2Q9ULI1 1742 aa26.27■■□□□ 1.8
FXN-203ENST00000396366 BTG4Q9NY30 223 aa26.26■■□□□ 1.79
FXN-203ENST00000396366 CCDC9Q9Y3X0 531 aaKnown RBP26.26■■□□□ 1.79
FXN-203ENST00000396366 ROCK2O75116 1388 aaKnown RBP26.25■■□□□ 1.79
FXN-203ENST00000396366 PPIP5K1Q6PFW1 1433 aa26.24■■□□□ 1.79
FXN-203ENST00000396366 TRIM26Q12899 539 aaPredicted RBP26.24■■□□□ 1.79
FXN-203ENST00000396366 EP400Q96L91 3159 aa26.23■■□□□ 1.79
FXN-203ENST00000396366 BRWD3Q6RI45 1802 aa26.21■■□□□ 1.79
FXN-203ENST00000396366 COL14A1Q05707 1796 aaKnown RBP26.21■■□□□ 1.79
FXN-203ENST00000396366 SEPT12Q8IYM1 358 aa26.21■■□□□ 1.79
FXN-203ENST00000396366 CABP1Q9NZU7 370 aa26.21■■□□□ 1.79
FXN-203ENST00000396366 NRAPQ86VF7 1730 aa26.21■■□□□ 1.79
FXN-203ENST00000396366 ABTB2Q8N961 1025 aa26.19■■□□□ 1.78
FXN-203ENST00000396366 PRDM11Q9NQV5 511 aa26.19■■□□□ 1.78
FXN-203ENST00000396366 ONECUT3O60422 494 aaPredicted RBP26.18■■□□□ 1.78
FXN-203ENST00000396366 ZC3H6P61129 1189 aaKnown RBP26.18■■□□□ 1.78
FXN-203ENST00000396366 CHRNA2Q15822 529 aa26.18■■□□□ 1.78
FXN-203ENST00000396366 KIAA0232Q92628 1395 aa26.18■■□□□ 1.78
FXN-203ENST00000396366 PHRF1Q9P1Y6 1649 aaKnown RBP26.17■■□□□ 1.78
FXN-203ENST00000396366 EVC2Q86UK5 1308 aa26.15■■□□□ 1.78
FXN-203ENST00000396366 FAM98CQ17RN3 349 aaKnown RBP26.14■■□□□ 1.78
FXN-203ENST00000396366 TONSLQ96HA7 1378 aa26.13■■□□□ 1.77
FXN-203ENST00000396366 SPATA31A5Q5VU36 1347 aa26.11■■□□□ 1.77
FXN-203ENST00000396366 SPATA31A7Q8IWB4 1347 aa26.11■■□□□ 1.77
FXN-203ENST00000396366 A0A0G2JS52 829 aa26.1■■□□□ 1.77
FXN-203ENST00000396366 MYT1Q01538 1121 aa26.1■■□□□ 1.77
FXN-203ENST00000396366 CARD11Q9BXL7 1154 aa26.1■■□□□ 1.77
FXN-203ENST00000396366 NRKQ7Z2Y5 1582 aa26.09■■□□□ 1.77
FXN-203ENST00000396366 USP6P35125 1406 aa26.09■■□□□ 1.77
FXN-203ENST00000396366 KRT27Q7Z3Y8 459 aa26.09■■□□□ 1.77
FXN-203ENST00000396366 STRN4Q9NRL3 753 aa26.09■■□□□ 1.77
FXN-203ENST00000396366 USP19O94966 1318 aa26.09■■□□□ 1.77
FXN-203ENST00000396366 NLRP13Q86W25 1043 aa26.08■■□□□ 1.77
FXN-203ENST00000396366 CCDC125Q86Z20 511 aa26.07■■□□□ 1.76
FXN-203ENST00000396366 GCP02774 474 aa26.06■■□□□ 1.76
FXN-203ENST00000396366 SSH2Q76I76 1423 aa26.05■■□□□ 1.76
FXN-203ENST00000396366 NLRP6P59044 892 aa26.04■■□□□ 1.76
FXN-203ENST00000396366 BRD4O60885 1362 aaPredicted RBP26.04■■□□□ 1.76
FXN-203ENST00000396366 CAMTA1Q9Y6Y1 1673 aa26.03■■□□□ 1.76
FXN-203ENST00000396366 FAM182BQ5T319 152 aa26.03■■□□□ 1.76
FXN-203ENST00000396366 SPATA31A1Q5TZJ5 1347 aa26.03■■□□□ 1.76
FXN-203ENST00000396366 EVA1CP58658 441 aa26.02■■□□□ 1.76
FXN-203ENST00000396366 CPDO75976 1380 aa26.02■■□□□ 1.76
FXN-203ENST00000396366 BLMP54132 1417 aaPredicted RBP26.02■■□□□ 1.76
FXN-203ENST00000396366 USP35Q9P2H5 1018 aa26.01■■□□□ 1.75
FXN-203ENST00000396366 PIK3C2AO00443 1686 aa26■■□□□ 1.75
FXN-203ENST00000396366 ZBTB7CA1YPR0 619 aa26■■□□□ 1.75
FXN-203ENST00000396366 DEFB132Q7Z7B7 95 aa26■■□□□ 1.75
FXN-203ENST00000396366 AKAP12Q02952 1782 aa26■■□□□ 1.75
FXN-203ENST00000396366 TTC21BQ7Z4L5 1316 aa25.99■■□□□ 1.75
FXN-203ENST00000396366 LARP1Q6PKG0 1096 aaKnown RBP25.99■■□□□ 1.75
FXN-203ENST00000396366 ZNF692Q9BU19 519 aaPredicted RBP25.99■■□□□ 1.75
FXN-203ENST00000396366 LMO7Q8WWI1 1683 aa25.99■■□□□ 1.75
FXN-203ENST00000396366 SBNO2Q9Y2G9 1366 aa25.98■■□□□ 1.75
FXN-203ENST00000396366 THSD7AQ9UPZ6 1657 aa25.98■■□□□ 1.75
FXN-203ENST00000396366 CPSF1Q10570 1443 aaKnown RBP25.97■■□□□ 1.75
FXN-203ENST00000396366 SLIT3O75094 1523 aa25.95■■□□□ 1.74
FXN-203ENST00000396366 KTN1Q86UP2 1357 aaKnown RBP25.95■■□□□ 1.74
FXN-203ENST00000396366 SF3B2Q13435 895 aaKnown RBP25.93■■□□□ 1.74
FXN-203ENST00000396366 TMC1Q8TDI8 760 aa25.93■■□□□ 1.74
FXN-203ENST00000396366 SOX12O15370 315 aa25.92■■□□□ 1.74
FXN-203ENST00000396366 SLC12A5Q9H2X9 1139 aa25.92■■□□□ 1.74
FXN-203ENST00000396366 ZRANB1Q9UGI0 708 aa25.92■■□□□ 1.74
FXN-203ENST00000396366 ST20-MTHFSA0A0A6YYL1 179 aa25.91■■□□□ 1.74
FXN-203ENST00000396366 COL5A2P05997 1499 aaPredicted RBP25.91■■□□□ 1.74
FXN-203ENST00000396366 CD163L1Q9NR16 1453 aa25.91■■□□□ 1.74
FXN-203ENST00000396366 TTC21AQ8NDW8 1320 aa25.9■■□□□ 1.74
FXN-203ENST00000396366 BARGINQ6ZT62 677 aa25.9■■□□□ 1.74
FXN-203ENST00000396366 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.9■■□□□ 1.74
FXN-203ENST00000396366 AXIN2Q9Y2T1 843 aa25.9■■□□□ 1.74
FXN-203ENST00000396366 MON2Q7Z3U7 1717 aa25.89■■□□□ 1.74
FXN-203ENST00000396366 TCP11L2Q8N4U5 519 aa25.89■■□□□ 1.74
FXN-203ENST00000396366 TESK2Q96S53 571 aa25.89■■□□□ 1.74
FXN-203ENST00000396366 AATKQ6ZMQ8 1374 aa25.89■■□□□ 1.74
FXN-203ENST00000396366 COL18A1P39060 1754 aa25.89■■□□□ 1.73
FXN-203ENST00000396366 ARHGEF25Q86VW2 580 aa25.86■■□□□ 1.73
FXN-203ENST00000396366 NME9Q86XW9 330 aa25.86■■□□□ 1.73
FXN-203ENST00000396366 PCGF6Q9BYE7 350 aa25.86■■□□□ 1.73
FXN-203ENST00000396366 KCNH5Q8NCM2 988 aa25.85■■□□□ 1.73
FXN-203ENST00000396366 SRCAPQ6ZRS2 3230 aa25.84■■□□□ 1.73
FXN-203ENST00000396366 RGPD5Q99666 1765 aa25.84■■□□□ 1.73
FXN-203ENST00000396366 CRB1P82279 1406 aa25.83■■□□□ 1.73
FXN-203ENST00000396366 BAG6P46379 1132 aa25.82■■□□□ 1.72
FXN-203ENST00000396366 EN1Q05925 392 aaPredicted RBP25.82■■□□□ 1.72
FXN-203ENST00000396366 PDE3BQ13370 1112 aa25.82■■□□□ 1.72
FXN-203ENST00000396366 HDGFL2Q7Z4V5 671 aaPredicted RBP25.82■■□□□ 1.72
FXN-203ENST00000396366 THRAP3Q9Y2W1 955 aaKnown RBP25.82■■□□□ 1.72
FXN-203ENST00000396366 RGPD1P0DJD0 1748 aa25.81■■□□□ 1.72
FXN-203ENST00000396366 TRIM37O94972 964 aa25.81■■□□□ 1.72
FXN-203ENST00000396366 FAM196AQ6ZSG2 479 aa25.81■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms