RNA–Protein interactions for RNA: ENST00000395938.6

PMP22-203, Transcript of peripheral myelin protein 22, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMP22, Length 1,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMP22-203ENST00000395938 KRT28Q7Z3Y7 464 aa17.72■□□□□ 0.43
PMP22-203ENST00000395938 NME9Q86XW9 330 aa17.72■□□□□ 0.43
PMP22-203ENST00000395938 RGPD8O14715 1765 aaPredicted RBP17.71■□□□□ 0.43
PMP22-203ENST00000395938 BRD4O60885 1362 aaPredicted RBP17.71■□□□□ 0.43
PMP22-203ENST00000395938 BRINP3Q76B58 766 aa17.7■□□□□ 0.42
PMP22-203ENST00000395938 COG3Q96JB2 828 aa17.7■□□□□ 0.42
PMP22-203ENST00000395938 CENPBP07199 599 aaPredicted RBP17.7■□□□□ 0.42
PMP22-203ENST00000395938 TNNT2P45379 298 aaPredicted RBP17.7■□□□□ 0.42
PMP22-203ENST00000395938 SSH2Q76I76 1423 aa17.69■□□□□ 0.42
PMP22-203ENST00000395938 PPP2R1AP30153 589 aa17.69■□□□□ 0.42
PMP22-203ENST00000395938 NLRP13Q86W25 1043 aa17.69■□□□□ 0.42
PMP22-203ENST00000395938 XPCQ01831 940 aaPredicted RBP17.68■□□□□ 0.42
PMP22-203ENST00000395938 ABTB2Q8N961 1025 aa17.68■□□□□ 0.42
PMP22-203ENST00000395938 NPHP3Q7Z494 1330 aa17.68■□□□□ 0.42
PMP22-203ENST00000395938 TOM1O60784 492 aa17.68■□□□□ 0.42
PMP22-203ENST00000395938 MRS2Q9HD23 443 aa17.68■□□□□ 0.42
PMP22-203ENST00000395938 ZRANB1Q9UGI0 708 aa17.68■□□□□ 0.42
PMP22-203ENST00000395938 AKAP12Q02952 1782 aa17.66■□□□□ 0.42
PMP22-203ENST00000395938 NLRP6P59044 892 aa17.66■□□□□ 0.42
PMP22-203ENST00000395938 DDX17Q92841 729 aaKnown RBP17.66■□□□□ 0.42
PMP22-203ENST00000395938 MON2Q7Z3U7 1717 aa17.65■□□□□ 0.42
PMP22-203ENST00000395938 LMOD2Q6P5Q4 547 aa17.65■□□□□ 0.42
PMP22-203ENST00000395938 CCDC184Q52MB2 194 aa17.64■□□□□ 0.41
PMP22-203ENST00000395938 CERKQ8TCT0 537 aa17.64■□□□□ 0.41
PMP22-203ENST00000395938 KIF1AQ12756 1690 aa17.64■□□□□ 0.41
PMP22-203ENST00000395938 NUTM2GQ5VZR2 741 aa17.63■□□□□ 0.41
PMP22-203ENST00000395938 SCAF1Q9H7N4 1312 aaKnown RBP17.63■□□□□ 0.41
PMP22-203ENST00000395938 USP31Q70CQ4 1352 aa17.62■□□□□ 0.41
PMP22-203ENST00000395938 UBAP1LF5GYI3 381 aa17.61■□□□□ 0.41
PMP22-203ENST00000395938 MTHFSP49914 203 aa17.61■□□□□ 0.41
PMP22-203ENST00000395938 SBNO1A3KN83 1393 aa17.6■□□□□ 0.41
PMP22-203ENST00000395938 PIP4K2BP78356 416 aa17.59■□□□□ 0.41
PMP22-203ENST00000395938 FBLN1P23142 703 aa17.58■□□□□ 0.41
PMP22-203ENST00000395938 CFAP53Q96M91 514 aa17.58■□□□□ 0.41
PMP22-203ENST00000395938 NRKQ7Z2Y5 1582 aa17.58■□□□□ 0.41
PMP22-203ENST00000395938 SOS2Q07890 1332 aaPredicted RBP17.58■□□□□ 0.4
PMP22-203ENST00000395938 OVOS2A0A0J9YW53 1432 aa17.58■□□□□ 0.4
PMP22-203ENST00000395938 SOX12O15370 315 aa17.58■□□□□ 0.4
PMP22-203ENST00000395938 OVOS2Q6IE36 1432 aa17.58■□□□□ 0.4
PMP22-203ENST00000395938 IQSEC2Q5JU85 1478 aa17.57■□□□□ 0.4
PMP22-203ENST00000395938 KIF20BQ96Q89 1820 aa17.57■□□□□ 0.4
PMP22-203ENST00000395938 FAM9BQ8IZU0 186 aa17.57■□□□□ 0.4
PMP22-203ENST00000395938 POLKQ9UBT6 870 aa17.57■□□□□ 0.4
PMP22-203ENST00000395938 AATKQ6ZMQ8 1374 aa17.57■□□□□ 0.4
PMP22-203ENST00000395938 SPATA31A3Q5VYP0 1347 aa17.57■□□□□ 0.4
PMP22-203ENST00000395938 PPM1GO15355 546 aaPredicted RBP17.56■□□□□ 0.4
PMP22-203ENST00000395938 KCNH5Q8NCM2 988 aa17.56■□□□□ 0.4
PMP22-203ENST00000395938 PLEKHG5O94827 1062 aa17.56■□□□□ 0.4
PMP22-203ENST00000395938 PNISRQ8TF01 805 aaKnown RBP17.56■□□□□ 0.4
PMP22-203ENST00000395938 RRS1Q15050 365 aaKnown RBP17.55■□□□□ 0.4
PMP22-203ENST00000395938 PXDNQ92626 1479 aa17.54■□□□□ 0.4
PMP22-203ENST00000395938 ARHGEF10O15013 1369 aa17.54■□□□□ 0.4
PMP22-203ENST00000395938 LRRC59Q96AG4 307 aaKnown RBP17.54■□□□□ 0.4
PMP22-203ENST00000395938 EMILIN1Q9Y6C2 1016 aa17.54■□□□□ 0.4
PMP22-203ENST00000395938 TNS3Q68CZ2 1445 aa17.53■□□□□ 0.4
PMP22-203ENST00000395938 ANKRD26Q9UPS8 1709 aa17.53■□□□□ 0.4
PMP22-203ENST00000395938 GCP02774 474 aa17.52■□□□□ 0.4
PMP22-203ENST00000395938 WDR43Q15061 677 aaKnown RBP eCLIP17.52■□□□□ 0.4
PMP22-203ENST00000395938 PIK3C2AO00443 1686 aa17.52■□□□□ 0.39
PMP22-203ENST00000395938 AMPHP49418 695 aa17.51■□□□□ 0.39
PMP22-203ENST00000395938 NUDCQ9Y266 331 aa17.5■□□□□ 0.39
PMP22-203ENST00000395938 USP19O94966 1318 aa17.5■□□□□ 0.39
PMP22-203ENST00000395938 TRPM3Q9HCF6 1732 aaPredicted RBP17.49■□□□□ 0.39
PMP22-203ENST00000395938 YTHDC1Q96MU7 727 aaKnown RBP17.49■□□□□ 0.39
PMP22-203ENST00000395938 MAP3K19Q56UN5 1328 aa17.49■□□□□ 0.39
PMP22-203ENST00000395938 DIAPH1O60610 1272 aaKnown RBP17.49■□□□□ 0.39
PMP22-203ENST00000395938 ROBO1Q9Y6N7 1651 aa17.49■□□□□ 0.39
PMP22-203ENST00000395938 ZBTB7CA1YPR0 619 aa17.48■□□□□ 0.39
PMP22-203ENST00000395938 CABLES1Q8TDN4 633 aa17.48■□□□□ 0.39
PMP22-203ENST00000395938 HAP1P54257 671 aaPredicted RBP17.47■□□□□ 0.39
PMP22-203ENST00000395938 PNPLA6Q8IY17 1366 aa17.47■□□□□ 0.39
PMP22-203ENST00000395938 INSRP06213 1382 aa17.47■□□□□ 0.39
PMP22-203ENST00000395938 ADAMTS8Q9UP79 889 aa17.46■□□□□ 0.39
PMP22-203ENST00000395938 ZC3H6P61129 1189 aaKnown RBP17.45■□□□□ 0.38
PMP22-203ENST00000395938 HSP90AB2PQ58FF8 381 aa17.45■□□□□ 0.38
PMP22-203ENST00000395938 ARHGEF25Q86VW2 580 aa17.45■□□□□ 0.38
PMP22-203ENST00000395938 NHSL1Q5SYE7 1610 aa17.45■□□□□ 0.38
PMP22-203ENST00000395938 SMG6Q86US8 1419 aaKnown RBP17.45■□□□□ 0.38
PMP22-203ENST00000395938 U2SURPO15042 1029 aaKnown RBP17.44■□□□□ 0.38
PMP22-203ENST00000395938 ALS2Q96Q42 1657 aa17.44■□□□□ 0.38
PMP22-203ENST00000395938 AHDC1Q5TGY3 1603 aaPredicted RBP17.44■□□□□ 0.38
PMP22-203ENST00000395938 KIF24Q5T7B8 1368 aa17.44■□□□□ 0.38
PMP22-203ENST00000395938 HOXC9P31274 260 aa17.44■□□□□ 0.38
PMP22-203ENST00000395938 IP6K1Q92551 441 aa17.44■□□□□ 0.38
PMP22-203ENST00000395938 FLT4P35916 1363 aa17.43■□□□□ 0.38
PMP22-203ENST00000395938 USP54Q70EL1 1684 aa17.43■□□□□ 0.38
PMP22-203ENST00000395938 U2AF1L5P0DN76 240 aaPredicted RBP17.43■□□□□ 0.38
PMP22-203ENST00000395938 U2AF1Q01081 240 aaKnown RBP eCLIP17.43■□□□□ 0.38
PMP22-203ENST00000395938 SLIT3O75094 1523 aa17.43■□□□□ 0.38
PMP22-203ENST00000395938 IL13P35225 146 aa17.42■□□□□ 0.38
PMP22-203ENST00000395938 CDK12Q9NYV4 1490 aaPredicted RBP17.42■□□□□ 0.38
PMP22-203ENST00000395938 MAP2P11137 1827 aaKnown RBP17.41■□□□□ 0.38
PMP22-203ENST00000395938 EIF4A2Q14240 407 aaKnown RBP17.41■□□□□ 0.38
PMP22-203ENST00000395938 MED1Q15648 1581 aaPredicted RBP17.4■□□□□ 0.38
PMP22-203ENST00000395938 RTL1A6NKG5 1358 aa17.4■□□□□ 0.38
PMP22-203ENST00000395938 HNRNPUQ00839 825 aaKnown RBP eCLIP17.4■□□□□ 0.38
PMP22-203ENST00000395938 NFAT5O94916 1531 aa17.39■□□□□ 0.38
PMP22-203ENST00000395938 MARF1Q9Y4F3 1742 aaKnown RBP17.39■□□□□ 0.37
PMP22-203ENST00000395938 LTV1Q96GA3 475 aaPredicted RBP17.39■□□□□ 0.37
PMP22-203ENST00000395938 PNNQ9H307 717 aaKnown RBP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms