RNA–Protein interactions for RNA: ENST00000395906.7

CDRT1-204, CMT1A duplicated region transcript 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDRT1, Length 2,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-204ENST00000395906 CCDC144AA2RUR9 1427 aa12.01□□□□□ -0.49
CDRT1-204ENST00000395906 HSP90AB1P08238 724 aaKnown RBP12□□□□□ -0.49
CDRT1-204ENST00000395906 PDCL2Q8N4E4 241 aa12□□□□□ -0.49
CDRT1-204ENST00000395906 FEZ1Q99689 392 aa12□□□□□ -0.49
CDRT1-204ENST00000395906 ZNF692Q9BU19 519 aaPredicted RBP12□□□□□ -0.49
CDRT1-204ENST00000395906 CCDC39Q9UFE4 941 aa12□□□□□ -0.49
CDRT1-204ENST00000395906 A2MP01023 1474 aa12□□□□□ -0.49
CDRT1-204ENST00000395906 TRIM6-TRIM34B2RNG4 842 aa12□□□□□ -0.49
CDRT1-204ENST00000395906 PLPPR3Q6T4P5 718 aa12□□□□□ -0.49
CDRT1-204ENST00000395906 TRIM34Q9BYJ4 488 aa12□□□□□ -0.49
CDRT1-204ENST00000395906 PLA2R1Q13018 1463 aa12□□□□□ -0.49
CDRT1-204ENST00000395906 RPRD2Q5VT52 1461 aaKnown RBP12□□□□□ -0.49
CDRT1-204ENST00000395906 PPRC1Q5VV67 1664 aaKnown RBP12□□□□□ -0.49
CDRT1-204ENST00000395906 GLI2P10070 1586 aa11.99□□□□□ -0.49
CDRT1-204ENST00000395906 MYCNP04198 464 aaPredicted RBP11.99□□□□□ -0.49
CDRT1-204ENST00000395906 NGEFQ8N5V2 710 aa11.99□□□□□ -0.49
CDRT1-204ENST00000395906 RALBP1Q15311 655 aa11.99□□□□□ -0.49
CDRT1-204ENST00000395906 CHGAP10645 457 aaKnown RBP11.98□□□□□ -0.49
CDRT1-204ENST00000395906 CAPN2P17655 700 aa11.98□□□□□ -0.49
CDRT1-204ENST00000395906 FAM193AP78312 1265 aa11.98□□□□□ -0.49
CDRT1-204ENST00000395906 EFCC1Q9HA90 598 aa11.98□□□□□ -0.49
CDRT1-204ENST00000395906 MLH3Q9UHC1 1453 aa11.98□□□□□ -0.49
CDRT1-204ENST00000395906 MYBBP1AQ9BQG0 1328 aaKnown RBP11.98□□□□□ -0.49
CDRT1-204ENST00000395906 OGFRQ9NZT2 677 aa11.98□□□□□ -0.49
CDRT1-204ENST00000395906 CALCOCO1Q9P1Z2 691 aa11.98□□□□□ -0.49
CDRT1-204ENST00000395906 ABCA6Q8N139 1617 aa11.98□□□□□ -0.49
CDRT1-204ENST00000395906 KDM5CP41229 1560 aa11.98□□□□□ -0.49
CDRT1-204ENST00000395906 DDIT3P35638 169 aa11.97□□□□□ -0.49
CDRT1-204ENST00000395906 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.97□□□□□ -0.49
CDRT1-204ENST00000395906 TNPO1Q92973 898 aaKnown RBP11.97□□□□□ -0.49
CDRT1-204ENST00000395906 FRMPD1Q5SYB0 1578 aa11.97□□□□□ -0.49
CDRT1-204ENST00000395906 HECW2Q9P2P5 1572 aa11.97□□□□□ -0.49
CDRT1-204ENST00000395906 TSC1Q92574 1164 aa11.97□□□□□ -0.49
CDRT1-204ENST00000395906 CIZ1Q9ULV3 898 aaPredicted RBP11.97□□□□□ -0.49
CDRT1-204ENST00000395906 RICTORQ6R327 1708 aa11.96□□□□□ -0.49
CDRT1-204ENST00000395906 KIAA2012Q0VF49 1180 aa11.96□□□□□ -0.49
CDRT1-204ENST00000395906 NUTM2DQ5VT03 806 aaPredicted RBP11.96□□□□□ -0.49
CDRT1-204ENST00000395906 JARID2Q92833 1246 aaPredicted RBP11.96□□□□□ -0.49
CDRT1-204ENST00000395906 NCOA3Q9Y6Q9 1424 aa11.96□□□□□ -0.49
CDRT1-204ENST00000395906 CFAP74Q9C0B2 1584 aa11.96□□□□□ -0.49
CDRT1-204ENST00000395906 ZMYM3Q14202 1370 aa11.96□□□□□ -0.49
CDRT1-204ENST00000395906 PTMAP06454 111 aaKnown RBP11.96□□□□□ -0.5
CDRT1-204ENST00000395906 ZNF445P59923 1031 aa11.96□□□□□ -0.5
CDRT1-204ENST00000395906 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.96□□□□□ -0.5
CDRT1-204ENST00000395906 KANK1Q14678 1352 aa11.96□□□□□ -0.5
CDRT1-204ENST00000395906 SLFN14P0C7P3 912 aa11.95□□□□□ -0.5
CDRT1-204ENST00000395906 EIF3AQ14152 1382 aaKnown RBP11.95□□□□□ -0.5
CDRT1-204ENST00000395906 UNC13BO14795 1591 aa11.95□□□□□ -0.5
CDRT1-204ENST00000395906 TULP1O00294 542 aaPredicted RBP11.95□□□□□ -0.5
CDRT1-204ENST00000395906 KDM5DQ9BY66 1539 aa11.94□□□□□ -0.5
CDRT1-204ENST00000395906 U2AF2P26368 475 aaKnown RBP eCLIP11.94□□□□□ -0.5
CDRT1-204ENST00000395906 FBXO31Q5XUX0 539 aaPredicted RBP11.94□□□□□ -0.5
CDRT1-204ENST00000395906 HSCBQ8IWL3 235 aa11.94□□□□□ -0.5
CDRT1-204ENST00000395906 BCL2L12Q9HB09 334 aa11.94□□□□□ -0.5
CDRT1-204ENST00000395906 TEX14Q8IWB6 1497 aa11.94□□□□□ -0.5
CDRT1-204ENST00000395906 KLHL40Q2TBA0 621 aa11.94□□□□□ -0.5
CDRT1-204ENST00000395906 CHMP4CQ96CF2 233 aa11.94□□□□□ -0.5
CDRT1-204ENST00000395906 INSRP06213 1382 aa11.94□□□□□ -0.5
CDRT1-204ENST00000395906 UGGT1Q9NYU2 1555 aa11.94□□□□□ -0.5
CDRT1-204ENST00000395906 RAB3GAP1Q15042 981 aa11.93□□□□□ -0.5
CDRT1-204ENST00000395906 DIP2CQ9Y2E4 1556 aa11.93□□□□□ -0.5
CDRT1-204ENST00000395906 CC2D1BQ5T0F9 858 aaKnown RBP11.93□□□□□ -0.5
CDRT1-204ENST00000395906 ANKRD7Q92527 254 aa11.93□□□□□ -0.5
CDRT1-204ENST00000395906 IQGAP3Q86VI3 1631 aa11.93□□□□□ -0.5
CDRT1-204ENST00000395906 ZBTB9Q96C00 473 aa11.92□□□□□ -0.5
CDRT1-204ENST00000395906 GOLGA6L22H0YM25 854 aa11.92□□□□□ -0.5
CDRT1-204ENST00000395906 POLR3GLQ9BT43 218 aa11.92□□□□□ -0.5
CDRT1-204ENST00000395906 MAGI2Q86UL8 1455 aa11.92□□□□□ -0.5
CDRT1-204ENST00000395906 MROH1Q8NDA8 1641 aa11.92□□□□□ -0.5
CDRT1-204ENST00000395906 ZMYM4Q5VZL5 1548 aa11.91□□□□□ -0.5
CDRT1-204ENST00000395906 E9PCH4 1651 aa11.91□□□□□ -0.5
CDRT1-204ENST00000395906 PATL2C9JE40 543 aaKnown RBP11.91□□□□□ -0.5
CDRT1-204ENST00000395906 GRIPAP1Q4V328 841 aa11.9□□□□□ -0.5
CDRT1-204ENST00000395906 RBSNQ9H1K0 784 aa11.9□□□□□ -0.5
CDRT1-204ENST00000395906 ATP10AO60312 1499 aa11.9□□□□□ -0.5
CDRT1-204ENST00000395906 SMC5Q8IY18 1101 aa11.9□□□□□ -0.5
CDRT1-204ENST00000395906 FEZ2Q9UHY8 353 aaPredicted RBP11.9□□□□□ -0.5
CDRT1-204ENST00000395906 DDX49Q9Y6V7 483 aaKnown RBP11.9□□□□□ -0.5
CDRT1-204ENST00000395906 IGHDP01880 384 aa11.89□□□□□ -0.51
CDRT1-204ENST00000395906 TERF2Q15554 542 aa11.89□□□□□ -0.51
CDRT1-204ENST00000395906 NPATQ14207 1427 aa11.89□□□□□ -0.51
CDRT1-204ENST00000395906 CEP152O94986 1710 aa11.89□□□□□ -0.51
CDRT1-204ENST00000395906 LOC102724159A0A0B4J2E5 919 aa11.89□□□□□ -0.51
CDRT1-204ENST00000395906 MFAP1P55081 439 aaKnown RBP11.89□□□□□ -0.51
CDRT1-204ENST00000395906 PWP2Q15269 919 aaKnown RBP11.89□□□□□ -0.51
CDRT1-204ENST00000395906 C22orf23Q9BZE7 217 aa11.89□□□□□ -0.51
CDRT1-204ENST00000395906 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.88□□□□□ -0.51
CDRT1-204ENST00000395906 SIGLEC1Q9BZZ2 1709 aa11.88□□□□□ -0.51
CDRT1-204ENST00000395906 BLMP54132 1417 aaPredicted RBP11.88□□□□□ -0.51
CDRT1-204ENST00000395906 ARHGAP31Q2M1Z3 1444 aa11.88□□□□□ -0.51
CDRT1-204ENST00000395906 PRDM15P57071 1507 aaPredicted RBP11.88□□□□□ -0.51
CDRT1-204ENST00000395906 TNNT3P45378 269 aaPredicted RBP11.88□□□□□ -0.51
CDRT1-204ENST00000395906 CARD11Q9BXL7 1154 aa11.88□□□□□ -0.51
CDRT1-204ENST00000395906 BCORL1Q5H9F3 1711 aa11.88□□□□□ -0.51
CDRT1-204ENST00000395906 FAM177BA6PVY3 158 aa11.87□□□□□ -0.51
CDRT1-204ENST00000395906 CLEC17AQ6ZS10 378 aa11.87□□□□□ -0.51
CDRT1-204ENST00000395906 NLRP13Q86W25 1043 aa11.87□□□□□ -0.51
CDRT1-204ENST00000395906 CARD10Q9BWT7 1032 aa11.87□□□□□ -0.51
CDRT1-204ENST00000395906 DEPDC5O75140 1603 aa11.87□□□□□ -0.51
CDRT1-204ENST00000395906 CEBPAP49715 358 aaPredicted RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms