RNA–Protein interactions for RNA: ENST00000395853.5

MSH5-205, Transcript of mutS homolog 5, humanhuman

TSL 2 BASIC

Gene MSH5, Length 2,704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-205ENST00000395853 SLC52A1Q9NWF4 448 aa11.34□□□□□ -0.59
MSH5-205ENST00000395853 KIF15Q9NS87 1388 aa11.34□□□□□ -0.59
MSH5-205ENST00000395853 NUP155O75694 1391 aa11.33□□□□□ -0.6
MSH5-205ENST00000395853 GOLGA6L3A6NEY3 463 aa11.33□□□□□ -0.6
MSH5-205ENST00000395853 STAG3Q9UJ98 1225 aa11.33□□□□□ -0.6
MSH5-205ENST00000395853 NCOA3Q9Y6Q9 1424 aa11.32□□□□□ -0.6
MSH5-205ENST00000395853 PROSER2Q86WR7 435 aaPredicted RBP11.32□□□□□ -0.6
MSH5-205ENST00000395853 TRIM44Q96DX7 344 aaPredicted RBP11.32□□□□□ -0.6
MSH5-205ENST00000395853 JCADQ9P266 1359 aa11.32□□□□□ -0.6
MSH5-205ENST00000395853 SLC4A3P48751 1232 aa11.32□□□□□ -0.6
MSH5-205ENST00000395853 ZNF622Q969S3 477 aaKnown RBP eCLIP11.32□□□□□ -0.66e-12■□□□□ 10
MSH5-205ENST00000395853 MSH6P52701 1360 aa11.32□□□□□ -0.6
MSH5-205ENST00000395853 PTMSP20962 102 aa11.31□□□□□ -0.6
MSH5-205ENST00000395853 NOS1P29475 1434 aa11.31□□□□□ -0.6
MSH5-205ENST00000395853 ERBB4Q15303 1308 aa11.31□□□□□ -0.6
MSH5-205ENST00000395853 MYCNP04198 464 aaPredicted RBP11.31□□□□□ -0.6
MSH5-205ENST00000395853 SLC20A2Q08357 652 aa11.31□□□□□ -0.6
MSH5-205ENST00000395853 GRIPAP1Q4V328 841 aa11.31□□□□□ -0.6
MSH5-205ENST00000395853 AXDND1Q5T1B0 1012 aaPredicted RBP11.31□□□□□ -0.6
MSH5-205ENST00000395853 ADGRB3O60242 1522 aa11.31□□□□□ -0.6
MSH5-205ENST00000395853 PSEN1P49768 467 aa11.3□□□□□ -0.6
MSH5-205ENST00000395853 EIF4G2P78344 907 aaKnown RBP eCLIP11.3□□□□□ -0.6
MSH5-205ENST00000395853 PANK2Q9BZ23 570 aa11.3□□□□□ -0.6
MSH5-205ENST00000395853 IDI1Q13907 227 aa11.3□□□□□ -0.6
MSH5-205ENST00000395853 CCDC9Q9Y3X0 531 aaKnown RBP11.3□□□□□ -0.6
MSH5-205ENST00000395853 FSD2A1L4K1 749 aa11.29□□□□□ -0.6
MSH5-205ENST00000395853 ZBTB22O15209 634 aa11.29□□□□□ -0.6
MSH5-205ENST00000395853 PHLPP1O60346 1717 aa11.29□□□□□ -0.6
MSH5-205ENST00000395853 TMED8Q6PL24 325 aaPredicted RBP11.29□□□□□ -0.6
MSH5-205ENST00000395853 CCDC94Q9BW85 323 aaPredicted RBP11.29□□□□□ -0.6
MSH5-205ENST00000395853 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.29□□□□□ -0.6
MSH5-205ENST00000395853 ARID3AQ99856 593 aa11.29□□□□□ -0.6
MSH5-205ENST00000395853 SPATA31A6Q5VVP1 1343 aa11.28□□□□□ -0.6
MSH5-205ENST00000395853 HDGFP51858 240 aaKnown RBP11.28□□□□□ -0.6
MSH5-205ENST00000395853 TICAM2Q86XR7 235 aa11.28□□□□□ -0.6
MSH5-205ENST00000395853 DNAJC2Q99543 621 aaKnown RBP11.28□□□□□ -0.6
MSH5-205ENST00000395853 MYH16Q9H6N6 1097 aa11.28□□□□□ -0.6
MSH5-205ENST00000395853 SLAIN2Q9P270 581 aa11.28□□□□□ -0.6
MSH5-205ENST00000395853 CHD2O14647 1828 aaKnown RBP11.27□□□□□ -0.6
MSH5-205ENST00000395853 PLEKHG1Q9ULL1 1385 aa11.27□□□□□ -0.61
MSH5-205ENST00000395853 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.27□□□□□ -0.61
MSH5-205ENST00000395853 CERS3Q8IU89 383 aa11.27□□□□□ -0.61
MSH5-205ENST00000395853 OFD1O75665 1012 aa11.27□□□□□ -0.61
MSH5-205ENST00000395853 SLC26A8Q96RN1 970 aa11.27□□□□□ -0.61
MSH5-205ENST00000395853 COL16A1Q07092 1604 aaPredicted RBP11.26□□□□□ -0.61
MSH5-205ENST00000395853 ZNF772Q68DY9 489 aaPredicted RBP11.26□□□□□ -0.61
MSH5-205ENST00000395853 CGNQ9P2M7 1197 aaKnown RBP11.26□□□□□ -0.61
MSH5-205ENST00000395853 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.26□□□□□ -0.614e-7■■□□□ 12.9
MSH5-205ENST00000395853 ZFYVE9O95405 1425 aa11.25□□□□□ -0.61
MSH5-205ENST00000395853 AEBP1Q8IUX7 1158 aa11.25□□□□□ -0.61
MSH5-205ENST00000395853 MRE11P49959 708 aa11.25□□□□□ -0.61
MSH5-205ENST00000395853 AHDC1Q5TGY3 1603 aaPredicted RBP11.24□□□□□ -0.61
MSH5-205ENST00000395853 SOX12O15370 315 aa11.24□□□□□ -0.61
MSH5-205ENST00000395853 TBX22Q9Y458 520 aa11.24□□□□□ -0.61
MSH5-205ENST00000395853 ZBED9Q6R2W3 1325 aa11.24□□□□□ -0.61
MSH5-205ENST00000395853 PIK3R4Q99570 1358 aa11.24□□□□□ -0.61
MSH5-205ENST00000395853 SETD1AO15047 1707 aaKnown RBP11.24□□□□□ -0.61
MSH5-205ENST00000395853 IRX5P78411 483 aaPredicted RBP11.24□□□□□ -0.61
MSH5-205ENST00000395853 SHPRHQ149N8 1683 aa11.24□□□□□ -0.61
MSH5-205ENST00000395853 CDK12Q9NYV4 1490 aaPredicted RBP11.24□□□□□ -0.61
MSH5-205ENST00000395853 SPATA31E1Q6ZUB1 1445 aa11.23□□□□□ -0.61
MSH5-205ENST00000395853 DIP2AQ14689 1571 aa11.23□□□□□ -0.61
MSH5-205ENST00000395853 NGEFQ8N5V2 710 aa11.23□□□□□ -0.61
MSH5-205ENST00000395853 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.23□□□□□ -0.61
MSH5-205ENST00000395853 TMC1Q8TDI8 760 aa11.23□□□□□ -0.61
MSH5-205ENST00000395853 DYNC1I1O14576 645 aa11.22□□□□□ -0.61
MSH5-205ENST00000395853 CC2D1BQ5T0F9 858 aaKnown RBP11.22□□□□□ -0.61
MSH5-205ENST00000395853 FAM43BQ6ZT52 329 aaPredicted RBP11.22□□□□□ -0.61
MSH5-205ENST00000395853 CADPS2Q86UW7 1296 aa11.22□□□□□ -0.61
MSH5-205ENST00000395853 UPF1Q92900 1129 aaKnown RBP eCLIP11.22□□□□□ -0.61
MSH5-205ENST00000395853 TPRNQ4KMQ1 711 aa11.22□□□□□ -0.61
MSH5-205ENST00000395853 RNF123Q5XPI4 1314 aa11.22□□□□□ -0.61
MSH5-205ENST00000395853 RIMS2Q9UQ26 1411 aa11.22□□□□□ -0.61
MSH5-205ENST00000395853 UNC13BO14795 1591 aa11.21□□□□□ -0.61
MSH5-205ENST00000395853 CCDC7Q96M83 1385 aa11.21□□□□□ -0.61
MSH5-205ENST00000395853 KDM2AQ9Y2K7 1162 aa11.21□□□□□ -0.61
MSH5-205ENST00000395853 MCCP23508 829 aa11.21□□□□□ -0.62
MSH5-205ENST00000395853 GEMIN8Q9NWZ8 242 aaKnown RBP11.21□□□□□ -0.62
MSH5-205ENST00000395853 TMEM131LA2VDJ0 1609 aa11.2□□□□□ -0.62
MSH5-205ENST00000395853 LRP6O75581 1613 aa11.2□□□□□ -0.62
MSH5-205ENST00000395853 PHF14O94880 888 aa11.2□□□□□ -0.62
MSH5-205ENST00000395853 RALBP1Q15311 655 aa11.2□□□□□ -0.62
MSH5-205ENST00000395853 C19orf44Q9H6X5 657 aa11.2□□□□□ -0.62
MSH5-205ENST00000395853 YY1AP1Q9H869 796 aa11.2□□□□□ -0.62
MSH5-205ENST00000395853 UQCRHLA0A096LP55 91 aa11.2□□□□□ -0.62
MSH5-205ENST00000395853 UQCRHP07919 91 aa11.2□□□□□ -0.62
MSH5-205ENST00000395853 RBM33Q96EV2 1170 aaKnown RBP11.2□□□□□ -0.62
MSH5-205ENST00000395853 PLCD4Q9BRC7 762 aa11.2□□□□□ -0.62
MSH5-205ENST00000395853 MEX3CQ5U5Q3 659 aaKnown RBP11.19□□□□□ -0.62
MSH5-205ENST00000395853 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.19□□□□□ -0.62
MSH5-205ENST00000395853 DCCP43146 1447 aa11.19□□□□□ -0.62
MSH5-205ENST00000395853 KIF7Q2M1P5 1343 aa11.18□□□□□ -0.62
MSH5-205ENST00000395853 R3HCC1Q9Y3T6 440 aaKnown RBP11.18□□□□□ -0.62
MSH5-205ENST00000395853 MYO5BQ9ULV0 1848 aa11.18□□□□□ -0.62
MSH5-205ENST00000395853 CLSTN1O94985 981 aa11.18□□□□□ -0.62
MSH5-205ENST00000395853 RXRBP28702 533 aa11.18□□□□□ -0.62
MSH5-205ENST00000395853 ADAMTS13Q76LX8 1427 aa11.18□□□□□ -0.62
MSH5-205ENST00000395853 IQGAP3Q86VI3 1631 aa11.17□□□□□ -0.62
MSH5-205ENST00000395853 ATF3P18847 181 aa11.17□□□□□ -0.62
MSH5-205ENST00000395853 USP47Q96K76 1375 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms