RNA–Protein interactions for RNA: ENST00000395793.7

CXCL12-204, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-204ENST00000395793 COL14A1Q05707 1796 aaKnown RBP26.11■■□□□ 1.77
CXCL12-204ENST00000395793 PHRF1Q9P1Y6 1649 aaKnown RBP26.1■■□□□ 1.77
CXCL12-204ENST00000395793 FAM83GA6ND36 823 aa26.1■■□□□ 1.77
CXCL12-204ENST00000395793 VPS72Q15906 364 aa26.09■■□□□ 1.77
CXCL12-204ENST00000395793 POLR3AO14802 1390 aaPredicted RBP26.08■■□□□ 1.77
CXCL12-204ENST00000395793 EP400Q96L91 3159 aa26.07■■□□□ 1.76
CXCL12-204ENST00000395793 PAK3O75914 559 aaPredicted RBP26.06■■□□□ 1.76
CXCL12-204ENST00000395793 CENPJQ9HC77 1338 aaPredicted RBP26.06■■□□□ 1.76
CXCL12-204ENST00000395793 ACEP12821 1306 aa26.05■■□□□ 1.76
CXCL12-204ENST00000395793 CCDC61Q9Y6R9 512 aa26.03■■□□□ 1.76
CXCL12-204ENST00000395793 PLEKHG3A1L390 1219 aa26.02■■□□□ 1.76
CXCL12-204ENST00000395793 NEUROD1Q13562 356 aa26.01■■□□□ 1.75
CXCL12-204ENST00000395793 BTG4Q9NY30 223 aa26.01■■□□□ 1.75
CXCL12-204ENST00000395793 NBPF8Q3BBV2 869 aa26■■□□□ 1.75
CXCL12-204ENST00000395793 SEPT12Q8IYM1 358 aa26■■□□□ 1.75
CXCL12-204ENST00000395793 CCDC9Q9Y3X0 531 aaKnown RBP26■■□□□ 1.75
CXCL12-204ENST00000395793 NRKQ7Z2Y5 1582 aa25.99■■□□□ 1.75
CXCL12-204ENST00000395793 PPIP5K1Q6PFW1 1433 aa25.99■■□□□ 1.75
CXCL12-204ENST00000395793 CABP2Q9NPB3 220 aa25.99■■□□□ 1.75
CXCL12-204ENST00000395793 ONECUT3O60422 494 aaPredicted RBP25.98■■□□□ 1.75
CXCL12-204ENST00000395793 NUTM2GQ5VZR2 741 aa25.98■■□□□ 1.75
CXCL12-204ENST00000395793 SRPK2P78362 688 aaKnown RBP25.97■■□□□ 1.75
CXCL12-204ENST00000395793 KIAA0232Q92628 1395 aa25.96■■□□□ 1.75
CXCL12-204ENST00000395793 THSD7AQ9UPZ6 1657 aa25.94■■□□□ 1.74
CXCL12-204ENST00000395793 PRDM11Q9NQV5 511 aa25.94■■□□□ 1.74
CXCL12-204ENST00000395793 ROCK2O75116 1388 aaKnown RBP25.93■■□□□ 1.74
CXCL12-204ENST00000395793 CHRNA2Q15822 529 aa25.92■■□□□ 1.74
CXCL12-204ENST00000395793 FAM98CQ17RN3 349 aaKnown RBP25.92■■□□□ 1.74
CXCL12-204ENST00000395793 SPATA31A5Q5VU36 1347 aa25.91■■□□□ 1.74
CXCL12-204ENST00000395793 SPATA31A7Q8IWB4 1347 aa25.91■■□□□ 1.74
CXCL12-204ENST00000395793 BLMP54132 1417 aaPredicted RBP25.91■■□□□ 1.74
CXCL12-204ENST00000395793 CCDC125Q86Z20 511 aa25.91■■□□□ 1.74
CXCL12-204ENST00000395793 USP19O94966 1318 aa25.9■■□□□ 1.74
CXCL12-204ENST00000395793 LMO7Q8WWI1 1683 aa25.9■■□□□ 1.74
CXCL12-204ENST00000395793 ZC3H6P61129 1189 aaKnown RBP25.9■■□□□ 1.74
CXCL12-204ENST00000395793 KRT27Q7Z3Y8 459 aa25.89■■□□□ 1.74
CXCL12-204ENST00000395793 USP6P35125 1406 aa25.88■■□□□ 1.73
CXCL12-204ENST00000395793 ABTB2Q8N961 1025 aa25.88■■□□□ 1.73
CXCL12-204ENST00000395793 CABP1Q9NZU7 370 aa25.88■■□□□ 1.73
CXCL12-204ENST00000395793 AKAP12Q02952 1782 aa25.87■■□□□ 1.73
CXCL12-204ENST00000395793 PIK3C2AO00443 1686 aa25.87■■□□□ 1.73
CXCL12-204ENST00000395793 CAMTA1Q9Y6Y1 1673 aa25.87■■□□□ 1.73
CXCL12-204ENST00000395793 A0A0G2JS52 829 aa25.86■■□□□ 1.73
CXCL12-204ENST00000395793 MYT1Q01538 1121 aa25.86■■□□□ 1.73
CXCL12-204ENST00000395793 SSH2Q76I76 1423 aa25.85■■□□□ 1.73
CXCL12-204ENST00000395793 EVC2Q86UK5 1308 aa25.85■■□□□ 1.73
CXCL12-204ENST00000395793 SPATA31A1Q5TZJ5 1347 aa25.84■■□□□ 1.73
CXCL12-204ENST00000395793 BRD4O60885 1362 aaPredicted RBP25.83■■□□□ 1.73
CXCL12-204ENST00000395793 CPDO75976 1380 aa25.83■■□□□ 1.73
CXCL12-204ENST00000395793 DEFB132Q7Z7B7 95 aa25.83■■□□□ 1.73
CXCL12-204ENST00000395793 SLIT3O75094 1523 aa25.83■■□□□ 1.72
CXCL12-204ENST00000395793 STRN4Q9NRL3 753 aa25.82■■□□□ 1.72
CXCL12-204ENST00000395793 NLRP13Q86W25 1043 aa25.8■■□□□ 1.72
CXCL12-204ENST00000395793 GCP02774 474 aa25.79■■□□□ 1.72
CXCL12-204ENST00000395793 FAM182BQ5T319 152 aa25.79■■□□□ 1.72
CXCL12-204ENST00000395793 RGPD1P0DJD0 1748 aa25.78■■□□□ 1.72
CXCL12-204ENST00000395793 TNS1Q9HBL0 1735 aaKnown RBP25.77■■□□□ 1.72
CXCL12-204ENST00000395793 MON2Q7Z3U7 1717 aa25.77■■□□□ 1.72
CXCL12-204ENST00000395793 ZRANB1Q9UGI0 708 aa25.76■■□□□ 1.71
CXCL12-204ENST00000395793 SBNO2Q9Y2G9 1366 aa25.76■■□□□ 1.71
CXCL12-204ENST00000395793 COL18A1P39060 1754 aa25.76■■□□□ 1.71
CXCL12-204ENST00000395793 COL5A2P05997 1499 aaPredicted RBP25.75■■□□□ 1.71
CXCL12-204ENST00000395793 CPSF1Q10570 1443 aaKnown RBP25.75■■□□□ 1.71
CXCL12-204ENST00000395793 TONSLQ96HA7 1378 aa25.75■■□□□ 1.71
CXCL12-204ENST00000395793 LARP1Q6PKG0 1096 aaKnown RBP25.75■■□□□ 1.71
CXCL12-204ENST00000395793 NLRP6P59044 892 aa25.74■■□□□ 1.71
CXCL12-204ENST00000395793 CARD11Q9BXL7 1154 aa25.74■■□□□ 1.71
CXCL12-204ENST00000395793 SF3B2Q13435 895 aaKnown RBP25.73■■□□□ 1.71
CXCL12-204ENST00000395793 USP35Q9P2H5 1018 aa25.73■■□□□ 1.71
CXCL12-204ENST00000395793 TTC21BQ7Z4L5 1316 aa25.72■■□□□ 1.71
CXCL12-204ENST00000395793 EVA1CP58658 441 aa25.71■■□□□ 1.71
CXCL12-204ENST00000395793 TRIM26Q12899 539 aaPredicted RBP25.71■■□□□ 1.71
CXCL12-204ENST00000395793 CD163L1Q9NR16 1453 aa25.7■■□□□ 1.7
CXCL12-204ENST00000395793 RGPD5Q99666 1765 aa25.69■■□□□ 1.7
CXCL12-204ENST00000395793 PARP4Q9UKK3 1724 aaKnown RBP25.69■■□□□ 1.7
CXCL12-204ENST00000395793 BARGINQ6ZT62 677 aa25.69■■□□□ 1.7
CXCL12-204ENST00000395793 AATKQ6ZMQ8 1374 aa25.69■■□□□ 1.7
CXCL12-204ENST00000395793 ZBTB7CA1YPR0 619 aa25.68■■□□□ 1.7
CXCL12-204ENST00000395793 ZNF692Q9BU19 519 aaPredicted RBP25.68■■□□□ 1.7
CXCL12-204ENST00000395793 WNK3Q9BYP7 1800 aa25.67■■□□□ 1.7
CXCL12-204ENST00000395793 USP54Q70EL1 1684 aa25.67■■□□□ 1.7
CXCL12-204ENST00000395793 NFAT5O94916 1531 aa25.67■■□□□ 1.7
CXCL12-204ENST00000395793 KTN1Q86UP2 1357 aaKnown RBP25.67■■□□□ 1.7
CXCL12-204ENST00000395793 TCP11L2Q8N4U5 519 aa25.66■■□□□ 1.7
CXCL12-204ENST00000395793 CRB1P82279 1406 aa25.65■■□□□ 1.7
CXCL12-204ENST00000395793 BAG6P46379 1132 aa25.65■■□□□ 1.7
CXCL12-204ENST00000395793 TTC21AQ8NDW8 1320 aa25.64■■□□□ 1.7
CXCL12-204ENST00000395793 DISP2A7MBM2 1401 aa25.64■■□□□ 1.7
CXCL12-204ENST00000395793 LRRC37A3O60309 1634 aa25.63■■□□□ 1.69
CXCL12-204ENST00000395793 SRCAPQ6ZRS2 3230 aa25.63■■□□□ 1.69
CXCL12-204ENST00000395793 EN1Q05925 392 aaPredicted RBP25.63■■□□□ 1.69
CXCL12-204ENST00000395793 AXIN2Q9Y2T1 843 aa25.62■■□□□ 1.69
CXCL12-204ENST00000395793 THRAP3Q9Y2W1 955 aaKnown RBP25.61■■□□□ 1.69
CXCL12-204ENST00000395793 SOX12O15370 315 aa25.6■■□□□ 1.69
CXCL12-204ENST00000395793 ARHGEF25Q86VW2 580 aa25.6■■□□□ 1.69
CXCL12-204ENST00000395793 PEAK1Q9H792 1746 aa25.6■■□□□ 1.69
CXCL12-204ENST00000395793 TRIM37O94972 964 aa25.59■■□□□ 1.69
CXCL12-204ENST00000395793 FAM196AQ6ZSG2 479 aa25.59■■□□□ 1.69
CXCL12-204ENST00000395793 PDE3BQ13370 1112 aa25.57■■□□□ 1.68
CXCL12-204ENST00000395793 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.57■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms