RNA–Protein interactions for RNA: ENST00000395727.6

PTPN20-208, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-208ENST00000395727 MLLT3P42568 568 aaPredicted RBP9.44□□□□□ -0.9
PTPN20-208ENST00000395727 LHX6Q9UPM6 363 aa9.44□□□□□ -0.9
PTPN20-208ENST00000395727 NPHP4O75161 1426 aaPredicted RBP9.44□□□□□ -0.9
PTPN20-208ENST00000395727 SYNMO15061 1565 aa9.44□□□□□ -0.9
PTPN20-208ENST00000395727 PIK3C2BO00750 1634 aa9.44□□□□□ -0.9
PTPN20-208ENST00000395727 IQGAP3Q86VI3 1631 aa9.43□□□□□ -0.9
PTPN20-208ENST00000395727 RRBP1Q9P2E9 1410 aaKnown RBP9.43□□□□□ -0.9
PTPN20-208ENST00000395727 ANKLE2Q86XL3 938 aa9.43□□□□□ -0.9
PTPN20-208ENST00000395727 ADGRB3O60242 1522 aa9.42□□□□□ -0.9
PTPN20-208ENST00000395727 SCAF11Q99590 1463 aaKnown RBP9.42□□□□□ -0.9
PTPN20-208ENST00000395727 ZNF335Q9H4Z2 1342 aaPredicted RBP9.42□□□□□ -0.9
PTPN20-208ENST00000395727 FOSBP53539 338 aa9.42□□□□□ -0.9
PTPN20-208ENST00000395727 MARVELD3Q96A59 401 aa9.42□□□□□ -0.9
PTPN20-208ENST00000395727 FAM50AQ14320 339 aaKnown RBP9.41□□□□□ -0.9
PTPN20-208ENST00000395727 DDX12PQ92771 950 aa9.41□□□□□ -0.9
PTPN20-208ENST00000395727 CHIC2Q9UKJ5 165 aa9.41□□□□□ -0.9
PTPN20-208ENST00000395727 PHF14O94880 888 aa9.4□□□□□ -0.9
PTPN20-208ENST00000395727 EMP3P54852 163 aa9.4□□□□□ -0.9
PTPN20-208ENST00000395727 PCDHGA10Q9Y5H3 936 aa9.4□□□□□ -0.9
PTPN20-208ENST00000395727 TMEM2Q9UHN6 1383 aa9.39□□□□□ -0.91
PTPN20-208ENST00000395727 PSDA5PKW4 1024 aaPredicted RBP9.39□□□□□ -0.91
PTPN20-208ENST00000395727 E9PCH4 1651 aa9.39□□□□□ -0.91
PTPN20-208ENST00000395727 GRXCR2A6NFK2 248 aa9.38□□□□□ -0.91
PTPN20-208ENST00000395727 OSBPP22059 807 aa9.38□□□□□ -0.91
PTPN20-208ENST00000395727 EPAS1Q99814 870 aa9.38□□□□□ -0.91
PTPN20-208ENST00000395727 SLC52A1Q9NWF4 448 aa9.38□□□□□ -0.91
PTPN20-208ENST00000395727 ZNF454Q8N9F8 522 aa9.37□□□□□ -0.91
PTPN20-208ENST00000395727 TMEM131LA2VDJ0 1609 aa9.37□□□□□ -0.91
PTPN20-208ENST00000395727 STRCP1A6NGW2 1772 aa9.37□□□□□ -0.91
PTPN20-208ENST00000395727 ERBB3P21860 1342 aa9.36□□□□□ -0.91
PTPN20-208ENST00000395727 PRIM1P49642 420 aaKnown RBP9.36□□□□□ -0.91
PTPN20-208ENST00000395727 SMYD5Q6GMV2 418 aa9.36□□□□□ -0.91
PTPN20-208ENST00000395727 ZFYVE9O95405 1425 aa9.36□□□□□ -0.91
PTPN20-208ENST00000395727 CFAP65Q6ZU64 1925 aaKnown RBP9.36□□□□□ -0.91
PTPN20-208ENST00000395727 NWD1Q149M9 1564 aa9.36□□□□□ -0.91
PTPN20-208ENST00000395727 ALKQ9UM73 1620 aa9.35□□□□□ -0.91
PTPN20-208ENST00000395727 POTEB3A0JP26 581 aa9.35□□□□□ -0.91
PTPN20-208ENST00000395727 IDI1Q13907 227 aa9.35□□□□□ -0.91
PTPN20-208ENST00000395727 VARS2Q5ST30 1063 aaKnown RBP9.35□□□□□ -0.91
PTPN20-208ENST00000395727 TYW1BQ6NUM6 668 aa9.35□□□□□ -0.91
PTPN20-208ENST00000395727 POTEBQ6S5H4 581 aa9.35□□□□□ -0.91
PTPN20-208ENST00000395727 LRRC7Q96NW7 1537 aa9.35□□□□□ -0.91
PTPN20-208ENST00000395727 FAM205CA6NFA0 338 aa9.34□□□□□ -0.91
PTPN20-208ENST00000395727 LTKP29376 864 aa9.34□□□□□ -0.91
PTPN20-208ENST00000395727 PPP4R3BQ5MIZ7 849 aa9.34□□□□□ -0.91
PTPN20-208ENST00000395727 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.34□□□□□ -0.91
PTPN20-208ENST00000395727 FBXW7Q969H0 707 aa9.34□□□□□ -0.91
PTPN20-208ENST00000395727 ZDHHC16Q969W1 377 aa9.34□□□□□ -0.91
PTPN20-208ENST00000395727 EID1Q9Y6B2 187 aa9.34□□□□□ -0.91
PTPN20-208ENST00000395727 NKTRP30414 1462 aaKnown RBP9.34□□□□□ -0.91
PTPN20-208ENST00000395727 HFM1A2PYH4 1435 aa9.33□□□□□ -0.92
PTPN20-208ENST00000395727 NAIPQ13075 1403 aa9.33□□□□□ -0.92
PTPN20-208ENST00000395727 EN1Q05925 392 aaPredicted RBP9.33□□□□□ -0.92
PTPN20-208ENST00000395727 TXNDC2Q86VQ3 553 aa9.33□□□□□ -0.92
PTPN20-208ENST00000395727 HS3ST6Q96QI5 342 aa9.33□□□□□ -0.92
PTPN20-208ENST00000395727 SPHKAPQ2M3C7 1700 aa9.33□□□□□ -0.92
PTPN20-208ENST00000395727 DIP2AQ14689 1571 aa9.33□□□□□ -0.92
PTPN20-208ENST00000395727 ADAM33Q9BZ11 813 aa9.32□□□□□ -0.92
PTPN20-208ENST00000395727 PLEKHG1Q9ULL1 1385 aa9.32□□□□□ -0.92
PTPN20-208ENST00000395727 XIRP1Q702N8 1843 aaKnown RBP9.31□□□□□ -0.92
PTPN20-208ENST00000395727 UBAP1LF5GYI3 381 aa9.31□□□□□ -0.92
PTPN20-208ENST00000395727 TULP1O00294 542 aaPredicted RBP9.31□□□□□ -0.92
PTPN20-208ENST00000395727 BCL2L12Q9HB09 334 aa9.31□□□□□ -0.92
PTPN20-208ENST00000395727 NUP155O75694 1391 aa9.31□□□□□ -0.92
PTPN20-208ENST00000395727 MYO5BQ9ULV0 1848 aa9.31□□□□□ -0.92
PTPN20-208ENST00000395727 TRPM2O94759 1503 aa9.31□□□□□ -0.92
PTPN20-208ENST00000395727 TOM1O60784 492 aa9.3□□□□□ -0.92
PTPN20-208ENST00000395727 RBM26Q5T8P6 1007 aaKnown RBP9.3□□□□□ -0.92
PTPN20-208ENST00000395727 LMOD2Q6P5Q4 547 aa9.3□□□□□ -0.92
PTPN20-208ENST00000395727 ZNF687Q8N1G0 1237 aa9.3□□□□□ -0.92
PTPN20-208ENST00000395727 RIMS2Q9UQ26 1411 aa9.3□□□□□ -0.92
PTPN20-208ENST00000395727 HDGFP51858 240 aaKnown RBP9.29□□□□□ -0.92
PTPN20-208ENST00000395727 PIK3R4Q99570 1358 aa9.28□□□□□ -0.92
PTPN20-208ENST00000395727 MAP3K7O43318 606 aa9.28□□□□□ -0.92
PTPN20-208ENST00000395727 C6orf132Q5T0Z8 1188 aa9.28□□□□□ -0.92
PTPN20-208ENST00000395727 POTEEQ6S8J3 1075 aa9.28□□□□□ -0.92
PTPN20-208ENST00000395727 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.28□□□□□ -0.92
PTPN20-208ENST00000395727 RBM33Q96EV2 1170 aaKnown RBP9.28□□□□□ -0.92
PTPN20-208ENST00000395727 NCOA3Q9Y6Q9 1424 aa9.28□□□□□ -0.92
PTPN20-208ENST00000395727 CHD2O14647 1828 aaKnown RBP9.28□□□□□ -0.92
PTPN20-208ENST00000395727 SETBP1Q9Y6X0 1596 aa9.28□□□□□ -0.92
PTPN20-208ENST00000395727 KCNA6P17658 529 aa9.27□□□□□ -0.93
PTPN20-208ENST00000395727 POTEGQ6S5H5 508 aa9.27□□□□□ -0.93
PTPN20-208ENST00000395727 CLTCL1P53675 1640 aa9.27□□□□□ -0.93
PTPN20-208ENST00000395727 ADAMTS13Q76LX8 1427 aa9.26□□□□□ -0.93
PTPN20-208ENST00000395727 POTEMA6NI47 508 aa9.26□□□□□ -0.93
PTPN20-208ENST00000395727 TSR1Q2NL82 804 aaKnown RBP9.26□□□□□ -0.93
PTPN20-208ENST00000395727 NRXN3Q9Y4C0 1643 aa9.26□□□□□ -0.93
PTPN20-208ENST00000395727 ITGAEP38570 1179 aa9.25□□□□□ -0.93
PTPN20-208ENST00000395727 PBX2P40425 430 aa9.25□□□□□ -0.93
PTPN20-208ENST00000395727 PPARGC1BQ86YN6 1023 aaKnown RBP9.25□□□□□ -0.93
PTPN20-208ENST00000395727 CDHR5Q9HBB8 845 aa9.25□□□□□ -0.93
PTPN20-208ENST00000395727 TBX22Q9Y458 520 aa9.25□□□□□ -0.93
PTPN20-208ENST00000395727 ACIN1Q9UKV3 1341 aaKnown RBP9.25□□□□□ -0.93
PTPN20-208ENST00000395727 TMEM94Q12767 1356 aa9.24□□□□□ -0.93
PTPN20-208ENST00000395727 FAM135BQ49AJ0 1406 aa9.24□□□□□ -0.93
PTPN20-208ENST00000395727 GPR37O15354 613 aa9.24□□□□□ -0.93
PTPN20-208ENST00000395727 PTPREP23469 700 aa9.24□□□□□ -0.93
PTPN20-208ENST00000395727 NPDC1Q9NQX5 325 aaPredicted RBP9.24□□□□□ -0.93
PTPN20-208ENST00000395727 XRN1Q8IZH2 1706 aaKnown RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms