RNA–Protein interactions for RNA: ENST00000395721.6

PTPN20-205, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN20, Length 2,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-205ENST00000395721 ROCK2O75116 1388 aaKnown RBP12.59□□□□□ -0.39
PTPN20-205ENST00000395721 GJD4Q96KN9 370 aaPredicted RBP12.59□□□□□ -0.39
PTPN20-205ENST00000395721 QRICH2Q9H0J4 1663 aa12.58□□□□□ -0.4
PTPN20-205ENST00000395721 TRPM1Q7Z4N2 1603 aa12.58□□□□□ -0.4
PTPN20-205ENST00000395721 TOPAZ1Q8N9V7 1692 aa12.58□□□□□ -0.4
PTPN20-205ENST00000395721 CCDC9Q9Y3X0 531 aaKnown RBP12.58□□□□□ -0.4
PTPN20-205ENST00000395721 PLCH1Q4KWH8 1693 aa12.57□□□□□ -0.4
PTPN20-205ENST00000395721 RALGAPBQ86X10 1494 aa12.57□□□□□ -0.4
PTPN20-205ENST00000395721 NWD2Q9ULI1 1742 aa12.57□□□□□ -0.4
PTPN20-205ENST00000395721 ACEP12821 1306 aa12.57□□□□□ -0.4
PTPN20-205ENST00000395721 TONSLQ96HA7 1378 aa12.56□□□□□ -0.4
PTPN20-205ENST00000395721 PLEKHG3A1L390 1219 aa12.56□□□□□ -0.4
PTPN20-205ENST00000395721 POLR3AO14802 1390 aaPredicted RBP12.56□□□□□ -0.4
PTPN20-205ENST00000395721 CABP2Q9NPB3 220 aa12.56□□□□□ -0.4
PTPN20-205ENST00000395721 PPIP5K1Q6PFW1 1433 aa12.55□□□□□ -0.4
PTPN20-205ENST00000395721 CENPBP07199 599 aaPredicted RBP12.55□□□□□ -0.4
PTPN20-205ENST00000395721 VPS72Q15906 364 aa12.55□□□□□ -0.4
PTPN20-205ENST00000395721 NBPF8Q3BBV2 869 aa12.55□□□□□ -0.4
PTPN20-205ENST00000395721 EVC2Q86UK5 1308 aa12.55□□□□□ -0.4
PTPN20-205ENST00000395721 GLI3P10071 1580 aa12.55□□□□□ -0.4
PTPN20-205ENST00000395721 FAM83GA6ND36 823 aa12.54□□□□□ -0.4
PTPN20-205ENST00000395721 PRDM11Q9NQV5 511 aa12.54□□□□□ -0.4
PTPN20-205ENST00000395721 COL14A1Q05707 1796 aaKnown RBP12.54□□□□□ -0.4
PTPN20-205ENST00000395721 NUTM2GQ5VZR2 741 aa12.52□□□□□ -0.4
PTPN20-205ENST00000395721 BTG4Q9NY30 223 aa12.52□□□□□ -0.4
PTPN20-205ENST00000395721 A0A0G2JS52 829 aa12.52□□□□□ -0.41
PTPN20-205ENST00000395721 CRYBG1Q9Y4K1 1723 aa12.52□□□□□ -0.41
PTPN20-205ENST00000395721 BRD4O60885 1362 aaPredicted RBP12.51□□□□□ -0.41
PTPN20-205ENST00000395721 PHRF1Q9P1Y6 1649 aaKnown RBP12.51□□□□□ -0.41
PTPN20-205ENST00000395721 ABTB2Q8N961 1025 aa12.51□□□□□ -0.41
PTPN20-205ENST00000395721 NRAPQ86VF7 1730 aa12.51□□□□□ -0.41
PTPN20-205ENST00000395721 SEPT12Q8IYM1 358 aa12.51□□□□□ -0.41
PTPN20-205ENST00000395721 CARD11Q9BXL7 1154 aa12.51□□□□□ -0.41
PTPN20-205ENST00000395721 KIAA0232Q92628 1395 aa12.5□□□□□ -0.41
PTPN20-205ENST00000395721 CABP1Q9NZU7 370 aa12.5□□□□□ -0.41
PTPN20-205ENST00000395721 ZC3H6P61129 1189 aaKnown RBP12.49□□□□□ -0.41
PTPN20-205ENST00000395721 NLRP13Q86W25 1043 aa12.49□□□□□ -0.41
PTPN20-205ENST00000395721 BCL11AQ9H165 835 aa12.49□□□□□ -0.41
PTPN20-205ENST00000395721 USP6P35125 1406 aa12.49□□□□□ -0.41
PTPN20-205ENST00000395721 CHRNA2Q15822 529 aa12.48□□□□□ -0.41
PTPN20-205ENST00000395721 USP19O94966 1318 aa12.48□□□□□ -0.41
PTPN20-205ENST00000395721 CCDC125Q86Z20 511 aa12.47□□□□□ -0.41
PTPN20-205ENST00000395721 NRKQ7Z2Y5 1582 aa12.47□□□□□ -0.41
PTPN20-205ENST00000395721 FAM98CQ17RN3 349 aaKnown RBP12.47□□□□□ -0.41
PTPN20-205ENST00000395721 STRN4Q9NRL3 753 aa12.47□□□□□ -0.41
PTPN20-205ENST00000395721 SPATA31A5Q5VU36 1347 aa12.46□□□□□ -0.41
PTPN20-205ENST00000395721 SPATA31A7Q8IWB4 1347 aa12.46□□□□□ -0.41
PTPN20-205ENST00000395721 SBNO2Q9Y2G9 1366 aa12.46□□□□□ -0.41
PTPN20-205ENST00000395721 KRT27Q7Z3Y8 459 aa12.46□□□□□ -0.41
PTPN20-205ENST00000395721 ONECUT3O60422 494 aaPredicted RBP12.46□□□□□ -0.42
PTPN20-205ENST00000395721 EVA1CP58658 441 aa12.46□□□□□ -0.42
PTPN20-205ENST00000395721 BRWD3Q6RI45 1802 aa12.45□□□□□ -0.42
PTPN20-205ENST00000395721 NLRP6P59044 892 aa12.45□□□□□ -0.42
PTPN20-205ENST00000395721 SF3B2Q13435 895 aaKnown RBP12.45□□□□□ -0.42
PTPN20-205ENST00000395721 CPDO75976 1380 aa12.45□□□□□ -0.42
PTPN20-205ENST00000395721 ZBTB7CA1YPR0 619 aa12.45□□□□□ -0.42
PTPN20-205ENST00000395721 ZNF692Q9BU19 519 aaPredicted RBP12.45□□□□□ -0.42
PTPN20-205ENST00000395721 BLMP54132 1417 aaPredicted RBP12.44□□□□□ -0.42
PTPN20-205ENST00000395721 GCP02774 474 aa12.44□□□□□ -0.42
PTPN20-205ENST00000395721 TTC21BQ7Z4L5 1316 aa12.43□□□□□ -0.42
PTPN20-205ENST00000395721 SSH2Q76I76 1423 aa12.43□□□□□ -0.42
PTPN20-205ENST00000395721 SPATA31A1Q5TZJ5 1347 aa12.42□□□□□ -0.42
PTPN20-205ENST00000395721 TTC21AQ8NDW8 1320 aa12.42□□□□□ -0.42
PTPN20-205ENST00000395721 KTN1Q86UP2 1357 aaKnown RBP12.42□□□□□ -0.42
PTPN20-205ENST00000395721 SLIT3O75094 1523 aa12.42□□□□□ -0.42
PTPN20-205ENST00000395721 AKAP12Q02952 1782 aa12.42□□□□□ -0.42
PTPN20-205ENST00000395721 DIEXFQ68CQ4 756 aaKnown RBP12.42□□□□□ -0.42
PTPN20-205ENST00000395721 TMC1Q8TDI8 760 aa12.41□□□□□ -0.42
PTPN20-205ENST00000395721 PIK3C2AO00443 1686 aa12.41□□□□□ -0.42
PTPN20-205ENST00000395721 HDGFL2Q7Z4V5 671 aaPredicted RBP12.41□□□□□ -0.42
PTPN20-205ENST00000395721 THSD7AQ9UPZ6 1657 aa12.41□□□□□ -0.42
PTPN20-205ENST00000395721 CAMTA1Q9Y6Y1 1673 aa12.41□□□□□ -0.42
PTPN20-205ENST00000395721 LMO7Q8WWI1 1683 aa12.4□□□□□ -0.42
PTPN20-205ENST00000395721 USP35Q9P2H5 1018 aa12.4□□□□□ -0.42
PTPN20-205ENST00000395721 CPSF1Q10570 1443 aaKnown RBP12.4□□□□□ -0.42
PTPN20-205ENST00000395721 ZRANB1Q9UGI0 708 aa12.4□□□□□ -0.43
PTPN20-205ENST00000395721 LARP1Q6PKG0 1096 aaKnown RBP12.39□□□□□ -0.43
PTPN20-205ENST00000395721 KCNH5Q8NCM2 988 aa12.39□□□□□ -0.43
PTPN20-205ENST00000395721 AATKQ6ZMQ8 1374 aa12.39□□□□□ -0.43
PTPN20-205ENST00000395721 SOX12O15370 315 aa12.38□□□□□ -0.43
PTPN20-205ENST00000395721 SLC24A1O60721 1099 aa12.38□□□□□ -0.43
PTPN20-205ENST00000395721 TCP11L2Q8N4U5 519 aa12.38□□□□□ -0.43
PTPN20-205ENST00000395721 MON2Q7Z3U7 1717 aa12.38□□□□□ -0.43
PTPN20-205ENST00000395721 COL5A2P05997 1499 aaPredicted RBP12.38□□□□□ -0.43
PTPN20-205ENST00000395721 BAG6P46379 1132 aa12.38□□□□□ -0.43
PTPN20-205ENST00000395721 BARGINQ6ZT62 677 aa12.38□□□□□ -0.43
PTPN20-205ENST00000395721 TERF2IPQ9NYB0 399 aa12.38□□□□□ -0.43
PTPN20-205ENST00000395721 DEFB132Q7Z7B7 95 aa12.37□□□□□ -0.43
PTPN20-205ENST00000395721 PUS7Q96PZ0 661 aaKnown RBP12.37□□□□□ -0.43
PTPN20-205ENST00000395721 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.37□□□□□ -0.43
PTPN20-205ENST00000395721 ST20-MTHFSA0A0A6YYL1 179 aa12.36□□□□□ -0.43
PTPN20-205ENST00000395721 THRAP3Q9Y2W1 955 aaKnown RBP12.36□□□□□ -0.43
PTPN20-205ENST00000395721 PDE3BQ13370 1112 aa12.36□□□□□ -0.43
PTPN20-205ENST00000395721 YTHDC1Q96MU7 727 aaKnown RBP12.36□□□□□ -0.43
PTPN20-205ENST00000395721 CRB1P82279 1406 aa12.36□□□□□ -0.43
PTPN20-205ENST00000395721 FAM182BQ5T319 152 aa12.35□□□□□ -0.43
PTPN20-205ENST00000395721 SLC12A5Q9H2X9 1139 aa12.35□□□□□ -0.43
PTPN20-205ENST00000395721 EDC4Q6P2E9 1401 aaKnown RBP12.35□□□□□ -0.43
PTPN20-205ENST00000395721 CLSPNQ9HAW4 1339 aa12.35□□□□□ -0.43
PTPN20-205ENST00000395721 USP47Q96K76 1375 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms