RNA–Protein interactions for RNA: ENST00000395489.6

A1CF-206, Transcript of APOBEC1 complementation factor, humanhuman

TSL 2 BASIC

Gene A1CF, Length 9,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-206ENST00000395489 SLC4A1APQ9BWU0 796 aaKnown RBP7.73□□□□□ -1.17
A1CF-206ENST00000395489 TTC36A6NLP5 189 aa7.72□□□□□ -1.17
A1CF-206ENST00000395489 ZSCAN12O43309 604 aa7.72□□□□□ -1.17
A1CF-206ENST00000395489 PPP1R15AO75807 674 aaPredicted RBP7.72□□□□□ -1.17
A1CF-206ENST00000395489 B4GALNT4Q76KP1 1039 aa7.72□□□□□ -1.17
A1CF-206ENST00000395489 ZNHIT6Q9NWK9 470 aaKnown RBP7.72□□□□□ -1.17
A1CF-206ENST00000395489 USP25Q9UHP3 1055 aa7.72□□□□□ -1.17
A1CF-206ENST00000395489 MEX3CQ5U5Q3 659 aaKnown RBP7.72□□□□□ -1.17
A1CF-206ENST00000395489 RRBP1Q9P2E9 1410 aaKnown RBP7.72□□□□□ -1.17
A1CF-206ENST00000395489 LUC7L3O95232 432 aaKnown RBP7.72□□□□□ -1.17
A1CF-206ENST00000395489 LRRCC1Q9C099 1032 aa7.72□□□□□ -1.17
A1CF-206ENST00000395489 USH1CQ9Y6N9 552 aa7.72□□□□□ -1.17
A1CF-206ENST00000395489 RAB3GAP2Q9H2M9 1393 aa7.72□□□□□ -1.17
A1CF-206ENST00000395489 CT47B1P0C2W7 299 aaPredicted RBP7.72□□□□□ -1.17
A1CF-206ENST00000395489 KLHL10Q6JEL2 608 aa7.72□□□□□ -1.17
A1CF-206ENST00000395489 ZNF500O60304 480 aaPredicted RBP7.72□□□□□ -1.17
A1CF-206ENST00000395489 CBX1P83916 185 aa7.72□□□□□ -1.17
A1CF-206ENST00000395489 SF3B2Q13435 895 aaKnown RBP7.72□□□□□ -1.17
A1CF-206ENST00000395489 ZMAT2Q96NC0 199 aaKnown RBP7.71□□□□□ -1.17
A1CF-206ENST00000395489 PLEKHD1A6NEE1 506 aa7.71□□□□□ -1.17
A1CF-206ENST00000395489 SMC2O95347 1197 aa7.71□□□□□ -1.17
A1CF-206ENST00000395489 CTCFLQ8NI51 663 aaPredicted RBP7.71□□□□□ -1.17
A1CF-206ENST00000395489 NBPF20Q3BBV1 942 aa7.71□□□□□ -1.17
A1CF-206ENST00000395489 DTNBP1Q96EV8 351 aa7.71□□□□□ -1.17
A1CF-206ENST00000395489 UTP14AQ9BVJ6 771 aaKnown RBP7.71□□□□□ -1.17
A1CF-206ENST00000395489 CEP83Q9Y592 693 aa7.71□□□□□ -1.17
A1CF-206ENST00000395489 ZNF592Q92610 1267 aa7.71□□□□□ -1.18
A1CF-206ENST00000395489 SMTNL1A8MU46 457 aa7.71□□□□□ -1.18
A1CF-206ENST00000395489 FMNL2Q96PY5 1086 aa7.71□□□□□ -1.18
A1CF-206ENST00000395489 ERICH4A6NGS2 130 aa7.71□□□□□ -1.18
A1CF-206ENST00000395489 SATB1Q01826 763 aa7.7□□□□□ -1.18
A1CF-206ENST00000395489 PSMD7P51665 324 aa7.7□□□□□ -1.18
A1CF-206ENST00000395489 NCAPGQ9BPX3 1015 aa7.7□□□□□ -1.18
A1CF-206ENST00000395489 IRX1P78414 480 aaPredicted RBP7.7□□□□□ -1.18
A1CF-206ENST00000395489 CBFA2T2O43439 604 aa7.7□□□□□ -1.18
A1CF-206ENST00000395489 GPATCH3Q96I76 525 aa7.7□□□□□ -1.18
A1CF-206ENST00000395489 DDX19BQ9UMR2 479 aa7.7□□□□□ -1.18
A1CF-206ENST00000395489 CEP104O60308 925 aa7.7□□□□□ -1.18
A1CF-206ENST00000395489 BSDC1Q9NW68 430 aaPredicted RBP7.7□□□□□ -1.18
A1CF-206ENST00000395489 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.7□□□□□ -1.18
A1CF-206ENST00000395489 NLRP5P59047 1200 aa7.7□□□□□ -1.18
A1CF-206ENST00000395489 PDE3AQ14432 1141 aa7.7□□□□□ -1.18
A1CF-206ENST00000395489 HSPA4P34932 840 aa7.69□□□□□ -1.18
A1CF-206ENST00000395489 ERLIN2O94905 339 aa7.69□□□□□ -1.18
A1CF-206ENST00000395489 TUBB2AQ13885 445 aa7.69□□□□□ -1.18
A1CF-206ENST00000395489 APLFQ8IW19 511 aaPredicted RBP7.69□□□□□ -1.18
A1CF-206ENST00000395489 TUBB2BQ9BVA1 445 aa7.69□□□□□ -1.18
A1CF-206ENST00000395489 EBAG9O00559 213 aa7.69□□□□□ -1.18
A1CF-206ENST00000395489 NBPF7P0C2Y1 421 aaPredicted RBP7.69□□□□□ -1.18
A1CF-206ENST00000395489 XRCC6P12956 609 aaKnown RBP eCLIP7.69□□□□□ -1.18
A1CF-206ENST00000395489 DBN1Q16643 649 aa7.69□□□□□ -1.18
A1CF-206ENST00000395489 PTPN14Q15678 1187 aa7.69□□□□□ -1.18
A1CF-206ENST00000395489 CCDC65Q8IXS2 484 aa7.69□□□□□ -1.18
A1CF-206ENST00000395489 ATP8B1O43520 1251 aa7.69□□□□□ -1.18
A1CF-206ENST00000395489 CCDC146Q8IYE0 955 aa7.69□□□□□ -1.18
A1CF-206ENST00000395489 SPC24Q8NBT2 197 aa7.69□□□□□ -1.18
A1CF-206ENST00000395489 NAP1L3Q99457 506 aaPredicted RBP7.69□□□□□ -1.18
A1CF-206ENST00000395489 ARFGAP3Q9NP61 516 aa7.69□□□□□ -1.18
A1CF-206ENST00000395489 LUC7LQ9NQ29 371 aaKnown RBP7.69□□□□□ -1.18
A1CF-206ENST00000395489 RAI14Q9P0K7 980 aa7.69□□□□□ -1.18
A1CF-206ENST00000395489 SPAG9O60271 1321 aaKnown RBP7.69□□□□□ -1.18
A1CF-206ENST00000395489 SLC8A1P32418 973 aa7.68□□□□□ -1.18
A1CF-206ENST00000395489 NAP1L1P55209 391 aaKnown RBP7.68□□□□□ -1.18
A1CF-206ENST00000395489 CRACR2AQ9BSW2 395 aa7.68□□□□□ -1.18
A1CF-206ENST00000395489 RAD50Q92878 1312 aa7.68□□□□□ -1.18
A1CF-206ENST00000395489 BUB1BO60566 1050 aaPredicted RBP7.68□□□□□ -1.18
A1CF-206ENST00000395489 ICE2Q659A1 982 aa7.68□□□□□ -1.18
A1CF-206ENST00000395489 GIGYF2Q6Y7W6 1299 aaKnown RBP7.68□□□□□ -1.18
A1CF-206ENST00000395489 WDR33Q9C0J8 1336 aaKnown RBP7.68□□□□□ -1.18
A1CF-206ENST00000395489 CCDC83Q8IWF9 413 aa7.68□□□□□ -1.18
A1CF-206ENST00000395489 RLBP1P12271 317 aa7.68□□□□□ -1.18
A1CF-206ENST00000395489 ANKS4BQ8N8V4 417 aa7.68□□□□□ -1.18
A1CF-206ENST00000395489 RABEP2Q9H5N1 569 aa7.68□□□□□ -1.18
A1CF-206ENST00000395489 TRIM5Q9C035 493 aa7.68□□□□□ -1.18
A1CF-206ENST00000395489 CCDC88BA6NC98 1476 aa7.68□□□□□ -1.18
A1CF-206ENST00000395489 SMARCE1Q969G3 411 aa7.67□□□□□ -1.18
A1CF-206ENST00000395489 ZFP91Q96JP5 570 aaPredicted RBP7.67□□□□□ -1.18
A1CF-206ENST00000395489 TMED1Q13445 227 aa7.67□□□□□ -1.18
A1CF-206ENST00000395489 SPECC1LQ69YQ0 1117 aa7.67□□□□□ -1.18
A1CF-206ENST00000395489 RSPH14Q9UHP6 348 aa7.67□□□□□ -1.18
A1CF-206ENST00000395489 BAG4O95429 457 aaKnown RBP7.67□□□□□ -1.18
A1CF-206ENST00000395489 CASQ1P31415 396 aa7.67□□□□□ -1.18
A1CF-206ENST00000395489 CCDC30Q5VVM6 783 aa7.67□□□□□ -1.18
A1CF-206ENST00000395489 SH3GL3Q99963 347 aa7.67□□□□□ -1.18
A1CF-206ENST00000395489 FAM184BQ9ULE4 1060 aa7.67□□□□□ -1.18
A1CF-206ENST00000395489 INTS3Q68E01 1043 aaKnown RBP7.67□□□□□ -1.18
A1CF-206ENST00000395489 GOLGA5Q8TBA6 731 aa7.67□□□□□ -1.18
A1CF-206ENST00000395489 HSP90AB2PQ58FF8 381 aa7.67□□□□□ -1.18
A1CF-206ENST00000395489 EFCAB13Q8IY85 973 aa7.66□□□□□ -1.18
A1CF-206ENST00000395489 INSRP06213 1382 aa7.66□□□□□ -1.18
A1CF-206ENST00000395489 WWC2Q6AWC2 1192 aa7.66□□□□□ -1.18
A1CF-206ENST00000395489 EHBP1Q8NDI1 1231 aa7.66□□□□□ -1.18
A1CF-206ENST00000395489 ERICH3Q5RHP9 1530 aa7.66□□□□□ -1.18
A1CF-206ENST00000395489 CCAR2Q8N163 923 aaKnown RBP7.66□□□□□ -1.18
A1CF-206ENST00000395489 RBM33Q96EV2 1170 aaKnown RBP7.66□□□□□ -1.18
A1CF-206ENST00000395489 CCDC97Q96F63 343 aaPredicted RBP7.66□□□□□ -1.18
A1CF-206ENST00000395489 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.66□□□□□ -1.18
A1CF-206ENST00000395489 PRDM10Q9NQV6 1147 aa7.66□□□□□ -1.18
A1CF-206ENST00000395489 TMF1P82094 1093 aa7.66□□□□□ -1.18
A1CF-206ENST00000395489 WHAMMP3Q1A5X7 153 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms