RNA–Protein interactions for RNA: ENST00000395246.5

CDC42SE2-202, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE2, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-202ENST00000395246 KIF24Q5T7B8 1368 aa19.03■□□□□ 0.64
CDC42SE2-202ENST00000395246 ZNF692Q9BU19 519 aaPredicted RBP19.03■□□□□ 0.64
CDC42SE2-202ENST00000395246 LRRC37A3O60309 1634 aa19.03■□□□□ 0.64
CDC42SE2-202ENST00000395246 ABCC6O95255 1503 aa19.03■□□□□ 0.64
CDC42SE2-202ENST00000395246 TXNDC2Q86VQ3 553 aa19.02■□□□□ 0.64
CDC42SE2-202ENST00000395246 ADAMTS8Q9UP79 889 aa19.01■□□□□ 0.63
CDC42SE2-202ENST00000395246 SLIT3O75094 1523 aa19.01■□□□□ 0.63
CDC42SE2-202ENST00000395246 CEBPAP49715 358 aaPredicted RBP19.01■□□□□ 0.63
CDC42SE2-202ENST00000395246 DLG5Q8TDM6 1919 aa19■□□□□ 0.63
CDC42SE2-202ENST00000395246 POGKQ9P215 609 aa18.99■□□□□ 0.63
CDC42SE2-202ENST00000395246 CCDC61Q9Y6R9 512 aa18.99■□□□□ 0.63
CDC42SE2-202ENST00000395246 LMO7Q8WWI1 1683 aa18.99■□□□□ 0.63
CDC42SE2-202ENST00000395246 WAPLQ7Z5K2 1190 aa18.99■□□□□ 0.63
CDC42SE2-202ENST00000395246 POLR3GLQ9BT43 218 aa18.98■□□□□ 0.63
CDC42SE2-202ENST00000395246 NFAT5O94916 1531 aa18.98■□□□□ 0.63
CDC42SE2-202ENST00000395246 PLEKHF1Q96S99 279 aa18.98■□□□□ 0.63
CDC42SE2-202ENST00000395246 MINK1Q8N4C8 1332 aaPredicted RBP18.97■□□□□ 0.63
CDC42SE2-202ENST00000395246 TRHP20396 242 aaPredicted RBP18.97■□□□□ 0.63
CDC42SE2-202ENST00000395246 HDGFL2Q7Z4V5 671 aaPredicted RBP18.97■□□□□ 0.63
CDC42SE2-202ENST00000395246 TTC21AQ8NDW8 1320 aa18.97■□□□□ 0.63
CDC42SE2-202ENST00000395246 MED1Q15648 1581 aaPredicted RBP18.96■□□□□ 0.63
CDC42SE2-202ENST00000395246 NUDT16Q96DE0 195 aaKnown RBP18.96■□□□□ 0.63
CDC42SE2-202ENST00000395246 NCAPD2Q15021 1401 aa18.95■□□□□ 0.62
CDC42SE2-202ENST00000395246 LTN1O94822 1766 aa18.95■□□□□ 0.62
CDC42SE2-202ENST00000395246 MORC1Q86VD1 984 aa18.94■□□□□ 0.62
CDC42SE2-202ENST00000395246 CABP1Q9NZU7 370 aa18.94■□□□□ 0.62
CDC42SE2-202ENST00000395246 STK26Q9P289 416 aa18.94■□□□□ 0.62
CDC42SE2-202ENST00000395246 ADAMTS7Q9UKP4 1686 aa18.94■□□□□ 0.62
CDC42SE2-202ENST00000395246 AMOTL2Q9Y2J4 779 aa18.93■□□□□ 0.62
CDC42SE2-202ENST00000395246 SRPK2P78362 688 aaKnown RBP18.92■□□□□ 0.62
CDC42SE2-202ENST00000395246 PLEKHG2Q9H7P9 1386 aa18.91■□□□□ 0.62
CDC42SE2-202ENST00000395246 SLFN5Q08AF3 891 aa18.9■□□□□ 0.62
CDC42SE2-202ENST00000395246 DUSP27Q5VZP5 1158 aa18.9■□□□□ 0.62
CDC42SE2-202ENST00000395246 ANKLE2Q86XL3 938 aa18.9■□□□□ 0.62
CDC42SE2-202ENST00000395246 FAM208AQ9UK61 1670 aaKnown RBP18.9■□□□□ 0.62
CDC42SE2-202ENST00000395246 N4BP2Q86UW6 1770 aaPredicted RBP18.89■□□□□ 0.61
CDC42SE2-202ENST00000395246 IL16Q14005 1332 aa18.89■□□□□ 0.61
CDC42SE2-202ENST00000395246 RUNDC1Q96C34 613 aa18.88■□□□□ 0.61
CDC42SE2-202ENST00000395246 WDR63Q8IWG1 891 aa18.88■□□□□ 0.61
CDC42SE2-202ENST00000395246 MTHFSP49914 203 aa18.87■□□□□ 0.61
CDC42SE2-202ENST00000395246 WDR43Q15061 677 aaKnown RBP eCLIP18.86■□□□□ 0.61
CDC42SE2-202ENST00000395246 RTL1A6NKG5 1358 aa18.86■□□□□ 0.61
CDC42SE2-202ENST00000395246 COL18A1P39060 1754 aa18.86■□□□□ 0.61
CDC42SE2-202ENST00000395246 TTC21BQ7Z4L5 1316 aa18.85■□□□□ 0.61
CDC42SE2-202ENST00000395246 KCNA6P17658 529 aa18.85■□□□□ 0.61
CDC42SE2-202ENST00000395246 POLKQ9UBT6 870 aa18.85■□□□□ 0.61
CDC42SE2-202ENST00000395246 CFAP53Q96M91 514 aa18.84■□□□□ 0.61
CDC42SE2-202ENST00000395246 KDRP35968 1356 aa18.84■□□□□ 0.61
CDC42SE2-202ENST00000395246 ABCA3Q99758 1704 aa18.82■□□□□ 0.6
CDC42SE2-202ENST00000395246 IL13P35225 146 aa18.81■□□□□ 0.6
CDC42SE2-202ENST00000395246 ACEP12821 1306 aa18.81■□□□□ 0.6
CDC42SE2-202ENST00000395246 E9PSI1 815 aa18.81■□□□□ 0.6
CDC42SE2-202ENST00000395246 NHSL1Q5SYE7 1610 aa18.81■□□□□ 0.6
CDC42SE2-202ENST00000395246 CT47B1P0C2W7 299 aaPredicted RBP18.8■□□□□ 0.6
CDC42SE2-202ENST00000395246 ARHGEF10O15013 1369 aa18.8■□□□□ 0.6
CDC42SE2-202ENST00000395246 FCHSD2O94868 740 aa18.8■□□□□ 0.6
CDC42SE2-202ENST00000395246 GOLGA2Q08379 1002 aa18.79■□□□□ 0.6
CDC42SE2-202ENST00000395246 WWC1Q8IX03 1113 aa18.79■□□□□ 0.6
CDC42SE2-202ENST00000395246 SIPA1L3O60292 1781 aaPredicted RBP18.79■□□□□ 0.6
CDC42SE2-202ENST00000395246 VIRMAQ69YN4 1812 aaKnown RBP18.79■□□□□ 0.6
CDC42SE2-202ENST00000395246 RRP1P56182 461 aaKnown RBP18.79■□□□□ 0.6
CDC42SE2-202ENST00000395246 PNNQ9H307 717 aaKnown RBP18.78■□□□□ 0.6
CDC42SE2-202ENST00000395246 PPP4R2Q9NY27 417 aa18.78■□□□□ 0.6
CDC42SE2-202ENST00000395246 RSPH6AQ9H0K4 717 aa18.78■□□□□ 0.6
CDC42SE2-202ENST00000395246 SBNO1A3KN83 1393 aa18.78■□□□□ 0.6
CDC42SE2-202ENST00000395246 SLC26A8Q96RN1 970 aa18.77■□□□□ 0.59
CDC42SE2-202ENST00000395246 FKBP8Q14318 412 aa18.76■□□□□ 0.59
CDC42SE2-202ENST00000395246 SAFB2Q14151 953 aaKnown RBP eCLIP18.76■□□□□ 0.59
CDC42SE2-202ENST00000395246 GGNBP2Q9H3C7 697 aa18.76■□□□□ 0.59
CDC42SE2-202ENST00000395246 RCAN3Q9UKA8 241 aa18.76■□□□□ 0.59
CDC42SE2-202ENST00000395246 BRPF1P55201 1214 aaPredicted RBP18.75■□□□□ 0.59
CDC42SE2-202ENST00000395246 C1orf167Q5SNV9 1468 aa18.74■□□□□ 0.59
CDC42SE2-202ENST00000395246 PLPPR3Q6T4P5 718 aa18.73■□□□□ 0.59
CDC42SE2-202ENST00000395246 PXDNQ92626 1479 aa18.73■□□□□ 0.59
CDC42SE2-202ENST00000395246 KDM3BQ7LBC6 1761 aa18.73■□□□□ 0.59
CDC42SE2-202ENST00000395246 USP19O94966 1318 aa18.73■□□□□ 0.59
CDC42SE2-202ENST00000395246 PARP4Q9UKK3 1724 aaKnown RBP18.73■□□□□ 0.59
CDC42SE2-202ENST00000395246 NEFLP07196 543 aa18.73■□□□□ 0.59
CDC42SE2-202ENST00000395246 CDCA7LQ96GN5 454 aa18.73■□□□□ 0.59
CDC42SE2-202ENST00000395246 TRIM35Q9UPQ4 493 aa18.72■□□□□ 0.59
CDC42SE2-202ENST00000395246 DIAPH1O60610 1272 aaKnown RBP18.72■□□□□ 0.59
CDC42SE2-202ENST00000395246 APAF1O14727 1248 aa18.71■□□□□ 0.59
CDC42SE2-202ENST00000395246 PKD1L3Q7Z443 1732 aa18.71■□□□□ 0.59
CDC42SE2-202ENST00000395246 NME9Q86XW9 330 aa18.71■□□□□ 0.59
CDC42SE2-202ENST00000395246 FLT4P35916 1363 aa18.7■□□□□ 0.58
CDC42SE2-202ENST00000395246 TCP11L2Q8N4U5 519 aa18.7■□□□□ 0.58
CDC42SE2-202ENST00000395246 SPINK5Q9NQ38 1064 aaPredicted RBP18.7■□□□□ 0.58
CDC42SE2-202ENST00000395246 COL22A1Q8NFW1 1626 aaPredicted RBP18.7■□□□□ 0.58
CDC42SE2-202ENST00000395246 OVOS2A0A0G2JMS6 1433 aa18.7■□□□□ 0.58
CDC42SE2-202ENST00000395246 COG3Q96JB2 828 aa18.69■□□□□ 0.58
CDC42SE2-202ENST00000395246 NCKAP5LQ9HCH0 1330 aa18.69■□□□□ 0.58
CDC42SE2-202ENST00000395246 AAMPQ13685 434 aa18.69■□□□□ 0.58
CDC42SE2-202ENST00000395246 ZNF853P0CG23 659 aa18.68■□□□□ 0.58
CDC42SE2-202ENST00000395246 RGPD2P0DJD1 1756 aa18.67■□□□□ 0.58
CDC42SE2-202ENST00000395246 CACNA1FO60840 1977 aa18.67■□□□□ 0.58
CDC42SE2-202ENST00000395246 TMPOP42166 694 aaKnown RBP18.66■□□□□ 0.58
CDC42SE2-202ENST00000395246 DMRT2Q9Y5R5 561 aa18.66■□□□□ 0.58
CDC42SE2-202ENST00000395246 IGSF1Q8N6C5 1336 aa18.66■□□□□ 0.58
CDC42SE2-202ENST00000395246 ZNF428Q96B54 188 aa18.65■□□□□ 0.58
CDC42SE2-202ENST00000395246 KDM4FA0A1W2PPD8 638 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms