RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 ALS2Q96Q42 1657 aa12.77□□□□□ -0.37
ATG4A-205ENST00000394892 VPS72Q15906 364 aa12.76□□□□□ -0.37
ATG4A-205ENST00000394892 NUTM2GQ5VZR2 741 aa12.76□□□□□ -0.37
ATG4A-205ENST00000394892 PAK3O75914 559 aaPredicted RBP12.75□□□□□ -0.37
ATG4A-205ENST00000394892 BLMP54132 1417 aaPredicted RBP12.75□□□□□ -0.37
ATG4A-205ENST00000394892 TRIM26Q12899 539 aaPredicted RBP12.75□□□□□ -0.37
ATG4A-205ENST00000394892 ABCA3Q99758 1704 aa12.75□□□□□ -0.37
ATG4A-205ENST00000394892 CCDC9Q9Y3X0 531 aaKnown RBP12.75□□□□□ -0.37
ATG4A-205ENST00000394892 TRPM1Q7Z4N2 1603 aa12.74□□□□□ -0.37
ATG4A-205ENST00000394892 ONECUT3O60422 494 aaPredicted RBP12.74□□□□□ -0.37
ATG4A-205ENST00000394892 CABP1Q9NZU7 370 aa12.74□□□□□ -0.37
ATG4A-205ENST00000394892 MARF1Q9Y4F3 1742 aaKnown RBP12.74□□□□□ -0.37
ATG4A-205ENST00000394892 TOPAZ1Q8N9V7 1692 aa12.73□□□□□ -0.37
ATG4A-205ENST00000394892 ROCK2O75116 1388 aaKnown RBP12.73□□□□□ -0.37
ATG4A-205ENST00000394892 SRPK2P78362 688 aaKnown RBP12.73□□□□□ -0.37
ATG4A-205ENST00000394892 BTG4Q9NY30 223 aa12.73□□□□□ -0.37
ATG4A-205ENST00000394892 PPIP5K1Q6PFW1 1433 aa12.72□□□□□ -0.37
ATG4A-205ENST00000394892 SSH2Q76I76 1423 aa12.72□□□□□ -0.37
ATG4A-205ENST00000394892 CRYBG1Q9Y4K1 1723 aa12.72□□□□□ -0.37
ATG4A-205ENST00000394892 CHRNA2Q15822 529 aa12.72□□□□□ -0.37
ATG4A-205ENST00000394892 SEPT12Q8IYM1 358 aa12.72□□□□□ -0.37
ATG4A-205ENST00000394892 KIAA0232Q92628 1395 aa12.71□□□□□ -0.37
ATG4A-205ENST00000394892 USP19O94966 1318 aa12.71□□□□□ -0.37
ATG4A-205ENST00000394892 A0A0G2JS52 829 aa12.71□□□□□ -0.37
ATG4A-205ENST00000394892 MYT1Q01538 1121 aa12.71□□□□□ -0.37
ATG4A-205ENST00000394892 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.71□□□□□ -0.38
ATG4A-205ENST00000394892 EP400Q96L91 3159 aa12.7□□□□□ -0.38
ATG4A-205ENST00000394892 ZC3H6P61129 1189 aaKnown RBP12.7□□□□□ -0.38
ATG4A-205ENST00000394892 KRT27Q7Z3Y8 459 aa12.69□□□□□ -0.38
ATG4A-205ENST00000394892 DEFB132Q7Z7B7 95 aa12.69□□□□□ -0.38
ATG4A-205ENST00000394892 POTEDQ86YR6 584 aa12.69□□□□□ -0.38
ATG4A-205ENST00000394892 PRDM11Q9NQV5 511 aa12.69□□□□□ -0.38
ATG4A-205ENST00000394892 PLCH1Q4KWH8 1693 aa12.69□□□□□ -0.38
ATG4A-205ENST00000394892 SPATA31A5Q5VU36 1347 aa12.68□□□□□ -0.38
ATG4A-205ENST00000394892 SPATA31A7Q8IWB4 1347 aa12.68□□□□□ -0.38
ATG4A-205ENST00000394892 FAM98CQ17RN3 349 aaKnown RBP12.68□□□□□ -0.38
ATG4A-205ENST00000394892 ABTB2Q8N961 1025 aa12.68□□□□□ -0.38
ATG4A-205ENST00000394892 USP6P35125 1406 aa12.68□□□□□ -0.38
ATG4A-205ENST00000394892 NRAPQ86VF7 1730 aa12.68□□□□□ -0.38
ATG4A-205ENST00000394892 QRICH2Q9H0J4 1663 aa12.67□□□□□ -0.38
ATG4A-205ENST00000394892 EVC2Q86UK5 1308 aa12.67□□□□□ -0.38
ATG4A-205ENST00000394892 BAG6P46379 1132 aa12.67□□□□□ -0.38
ATG4A-205ENST00000394892 PIAS4Q8N2W9 510 aaPredicted RBP12.67□□□□□ -0.38
ATG4A-205ENST00000394892 CARD11Q9BXL7 1154 aa12.67□□□□□ -0.38
ATG4A-205ENST00000394892 GCP02774 474 aa12.66□□□□□ -0.38
ATG4A-205ENST00000394892 TONSLQ96HA7 1378 aa12.66□□□□□ -0.38
ATG4A-205ENST00000394892 ITSN1Q15811 1721 aa12.65□□□□□ -0.38
ATG4A-205ENST00000394892 NWD2Q9ULI1 1742 aa12.65□□□□□ -0.38
ATG4A-205ENST00000394892 CPSF1Q10570 1443 aaKnown RBP12.65□□□□□ -0.38
ATG4A-205ENST00000394892 CAMTA1Q9Y6Y1 1673 aa12.65□□□□□ -0.38
ATG4A-205ENST00000394892 TESK2Q96S53 571 aa12.65□□□□□ -0.38
ATG4A-205ENST00000394892 COL14A1Q05707 1796 aaKnown RBP12.65□□□□□ -0.38
ATG4A-205ENST00000394892 CPDO75976 1380 aa12.65□□□□□ -0.38
ATG4A-205ENST00000394892 SBNO2Q9Y2G9 1366 aa12.65□□□□□ -0.38
ATG4A-205ENST00000394892 NRKQ7Z2Y5 1582 aa12.64□□□□□ -0.39
ATG4A-205ENST00000394892 SPATA31A1Q5TZJ5 1347 aa12.64□□□□□ -0.39
ATG4A-205ENST00000394892 TTC21BQ7Z4L5 1316 aa12.64□□□□□ -0.39
ATG4A-205ENST00000394892 PHRF1Q9P1Y6 1649 aaKnown RBP12.64□□□□□ -0.39
ATG4A-205ENST00000394892 FAM182BQ5T319 152 aa12.64□□□□□ -0.39
ATG4A-205ENST00000394892 CD163L1Q9NR16 1453 aa12.64□□□□□ -0.39
ATG4A-205ENST00000394892 NLRP6P59044 892 aa12.63□□□□□ -0.39
ATG4A-205ENST00000394892 LARP1Q6PKG0 1096 aaKnown RBP12.63□□□□□ -0.39
ATG4A-205ENST00000394892 NLRP13Q86W25 1043 aa12.63□□□□□ -0.39
ATG4A-205ENST00000394892 STRN4Q9NRL3 753 aa12.63□□□□□ -0.39
ATG4A-205ENST00000394892 BRD4O60885 1362 aaPredicted RBP12.63□□□□□ -0.39
ATG4A-205ENST00000394892 SLC12A5Q9H2X9 1139 aa12.62□□□□□ -0.39
ATG4A-205ENST00000394892 AXIN2Q9Y2T1 843 aa12.62□□□□□ -0.39
ATG4A-205ENST00000394892 SLIT3O75094 1523 aa12.62□□□□□ -0.39
ATG4A-205ENST00000394892 SRCAPQ6ZRS2 3230 aa12.61□□□□□ -0.39
ATG4A-205ENST00000394892 LMO7Q8WWI1 1683 aa12.61□□□□□ -0.39
ATG4A-205ENST00000394892 BRWD3Q6RI45 1802 aa12.6□□□□□ -0.39
ATG4A-205ENST00000394892 ST20-MTHFSA0A0A6YYL1 179 aa12.6□□□□□ -0.39
ATG4A-205ENST00000394892 PSDA5PKW4 1024 aaPredicted RBP12.6□□□□□ -0.39
ATG4A-205ENST00000394892 ZNF692Q9BU19 519 aaPredicted RBP12.6□□□□□ -0.39
ATG4A-205ENST00000394892 PIK3C2AO00443 1686 aa12.6□□□□□ -0.39
ATG4A-205ENST00000394892 THSD7AQ9UPZ6 1657 aa12.6□□□□□ -0.39
ATG4A-205ENST00000394892 ARHGEF25Q86VW2 580 aa12.59□□□□□ -0.39
ATG4A-205ENST00000394892 COL5A2P05997 1499 aaPredicted RBP12.59□□□□□ -0.39
ATG4A-205ENST00000394892 AATKQ6ZMQ8 1374 aa12.58□□□□□ -0.4
ATG4A-205ENST00000394892 KTN1Q86UP2 1357 aaKnown RBP12.58□□□□□ -0.4
ATG4A-205ENST00000394892 NME9Q86XW9 330 aa12.58□□□□□ -0.4
ATG4A-205ENST00000394892 USP35Q9P2H5 1018 aa12.58□□□□□ -0.4
ATG4A-205ENST00000394892 EN1Q05925 392 aaPredicted RBP12.57□□□□□ -0.4
ATG4A-205ENST00000394892 BARGINQ6ZT62 677 aa12.57□□□□□ -0.4
ATG4A-205ENST00000394892 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.57□□□□□ -0.4
ATG4A-205ENST00000394892 TTC21AQ8NDW8 1320 aa12.57□□□□□ -0.4
ATG4A-205ENST00000394892 ZBTB7CA1YPR0 619 aa12.56□□□□□ -0.4
ATG4A-205ENST00000394892 SOX12O15370 315 aa12.56□□□□□ -0.4
ATG4A-205ENST00000394892 ADRA2BP18089 450 aa12.56□□□□□ -0.4
ATG4A-205ENST00000394892 EVA1CP58658 441 aa12.56□□□□□ -0.4
ATG4A-205ENST00000394892 TCP11L2Q8N4U5 519 aa12.56□□□□□ -0.4
ATG4A-205ENST00000394892 NFAT5O94916 1531 aa12.56□□□□□ -0.4
ATG4A-205ENST00000394892 A0A1W2PP64 1363 aa12.56□□□□□ -0.4
ATG4A-205ENST00000394892 USP31Q70CQ4 1352 aa12.56□□□□□ -0.4
ATG4A-205ENST00000394892 LRP5O75197 1615 aa12.55□□□□□ -0.4
ATG4A-205ENST00000394892 FAM196AQ6ZSG2 479 aa12.55□□□□□ -0.4
ATG4A-205ENST00000394892 TMC1Q8TDI8 760 aa12.55□□□□□ -0.4
ATG4A-205ENST00000394892 PUS7Q96PZ0 661 aaKnown RBP12.55□□□□□ -0.4
ATG4A-205ENST00000394892 COL18A1P39060 1754 aa12.54□□□□□ -0.4
ATG4A-205ENST00000394892 R3HDM1Q15032 1099 aaKnown RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms