RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 HMMRO75330 724 aa14.5□□□□□ -0.09
UBE2D3-209ENST00000394804 HMOX1P09601 288 aa14.5□□□□□ -0.09
UBE2D3-209ENST00000394804 PRKAR2BP31323 418 aa14.5□□□□□ -0.09
UBE2D3-209ENST00000394804 SLC52A1Q9NWF4 448 aa14.49□□□□□ -0.09
UBE2D3-209ENST00000394804 TRAK2O60296 914 aa14.49□□□□□ -0.09
UBE2D3-209ENST00000394804 PCDHB15Q9Y5E8 787 aa14.49□□□□□ -0.09
UBE2D3-209ENST00000394804 FAM43AQ8N2R8 423 aa14.48□□□□□ -0.09
UBE2D3-209ENST00000394804 SSH1Q8WYL5 1049 aa14.48□□□□□ -0.09
UBE2D3-209ENST00000394804 ANO8Q9HCE9 1232 aaPredicted RBP14.48□□□□□ -0.09
UBE2D3-209ENST00000394804 ABCC11Q96J66 1382 aa14.48□□□□□ -0.09
UBE2D3-209ENST00000394804 ZNF521Q96K83 1311 aa14.48□□□□□ -0.09
UBE2D3-209ENST00000394804 MSNP26038 577 aaKnown RBP14.48□□□□□ -0.09
UBE2D3-209ENST00000394804 PTMAP06454 111 aaKnown RBP14.48□□□□□ -0.09
UBE2D3-209ENST00000394804 TBC1D32Q96NH3 1257 aa14.48□□□□□ -0.09
UBE2D3-209ENST00000394804 CCDC27Q2M243 656 aa14.47□□□□□ -0.09
UBE2D3-209ENST00000394804 TBC1D2Q9BYX2 928 aa14.47□□□□□ -0.09
UBE2D3-209ENST00000394804 MCM4P33991 863 aa14.47□□□□□ -0.09
UBE2D3-209ENST00000394804 C14orf37Q86TY3 774 aa14.47□□□□□ -0.09
UBE2D3-209ENST00000394804 TMEM57Q8N5G2 664 aa14.47□□□□□ -0.09
UBE2D3-209ENST00000394804 ST18O60284 1047 aa14.46□□□□□ -0.09
UBE2D3-209ENST00000394804 MRE11P49959 708 aa14.46□□□□□ -0.09
UBE2D3-209ENST00000394804 GCC1Q96CN9 775 aa14.46□□□□□ -0.09
UBE2D3-209ENST00000394804 ZNF428Q96B54 188 aa14.45□□□□□ -0.1
UBE2D3-209ENST00000394804 DMRT2Q9Y5R5 561 aa14.45□□□□□ -0.1
UBE2D3-209ENST00000394804 DDX49Q9Y6V7 483 aaKnown RBP14.45□□□□□ -0.1
UBE2D3-209ENST00000394804 SYNMO15061 1565 aa14.45□□□□□ -0.1
UBE2D3-209ENST00000394804 TRIM27P14373 513 aa14.45□□□□□ -0.1
UBE2D3-209ENST00000394804 PLXNC1O60486 1568 aa14.45□□□□□ -0.1
UBE2D3-209ENST00000394804 STK31Q9BXU1 1019 aa14.44□□□□□ -0.1
UBE2D3-209ENST00000394804 KDM4FA0A1W2PPD8 638 aa14.44□□□□□ -0.1
UBE2D3-209ENST00000394804 FCHSD2O94868 740 aa14.44□□□□□ -0.1
UBE2D3-209ENST00000394804 SLC4A10Q6U841 1118 aa14.44□□□□□ -0.1
UBE2D3-209ENST00000394804 CABP1Q9NZU7 370 aa14.44□□□□□ -0.1
UBE2D3-209ENST00000394804 IQGAP3Q86VI3 1631 aa14.44□□□□□ -0.1
UBE2D3-209ENST00000394804 CDC45O75419 566 aa14.44□□□□□ -0.1
UBE2D3-209ENST00000394804 RLBP1P12271 317 aa14.44□□□□□ -0.1
UBE2D3-209ENST00000394804 FBXO31Q5XUX0 539 aaPredicted RBP14.44□□□□□ -0.1
UBE2D3-209ENST00000394804 CHD1LQ86WJ1 897 aa14.44□□□□□ -0.1
UBE2D3-209ENST00000394804 TRMT2AQ8IZ69 625 aaKnown RBP14.44□□□□□ -0.1
UBE2D3-209ENST00000394804 CDK19Q9BWU1 502 aa14.44□□□□□ -0.1
UBE2D3-209ENST00000394804 UNC13BO14795 1591 aa14.44□□□□□ -0.1
UBE2D3-209ENST00000394804 SIGLEC1Q9BZZ2 1709 aa14.44□□□□□ -0.1
UBE2D3-209ENST00000394804 ANKRD36BQ8N2N9 1353 aa14.43□□□□□ -0.1
UBE2D3-209ENST00000394804 KDM5AP29375 1690 aaKnown RBP14.43□□□□□ -0.1
UBE2D3-209ENST00000394804 TNNQ9UQP3 1299 aa14.43□□□□□ -0.1
UBE2D3-209ENST00000394804 C1orf115Q9H7X2 142 aa14.42□□□□□ -0.1
UBE2D3-209ENST00000394804 TWISTNBQ3B726 338 aaPredicted RBP14.42□□□□□ -0.1
UBE2D3-209ENST00000394804 SEC24BO95487 1268 aa14.41□□□□□ -0.1
UBE2D3-209ENST00000394804 ALDH1L2Q3SY69 923 aa14.41□□□□□ -0.1
UBE2D3-209ENST00000394804 TRPM2O94759 1503 aa14.41□□□□□ -0.1
UBE2D3-209ENST00000394804 ZBTB7CA1YPR0 619 aa14.41□□□□□ -0.1
UBE2D3-209ENST00000394804 REC8O95072 547 aa14.41□□□□□ -0.1
UBE2D3-209ENST00000394804 PUS7Q96PZ0 661 aaKnown RBP14.41□□□□□ -0.1
UBE2D3-209ENST00000394804 IL16Q14005 1332 aa14.4□□□□□ -0.1
UBE2D3-209ENST00000394804 INTS3Q68E01 1043 aaKnown RBP14.4□□□□□ -0.1
UBE2D3-209ENST00000394804 HDAC1Q13547 482 aaPredicted RBP14.4□□□□□ -0.1
UBE2D3-209ENST00000394804 AEBP2Q6ZN18 517 aaPredicted RBP14.4□□□□□ -0.1
UBE2D3-209ENST00000394804 CIZ1Q9ULV3 898 aaPredicted RBP14.4□□□□□ -0.1
UBE2D3-209ENST00000394804 OS9Q13438 667 aaPredicted RBP14.39□□□□□ -0.11
UBE2D3-209ENST00000394804 NFE2L2Q16236 605 aa14.39□□□□□ -0.11
UBE2D3-209ENST00000394804 ISY1Q9ULR0 285 aaKnown RBP14.39□□□□□ -0.11
UBE2D3-209ENST00000394804 NUCB2P80303 420 aa14.39□□□□□ -0.11
UBE2D3-209ENST00000394804 ZMYM3Q14202 1370 aa14.39□□□□□ -0.11
UBE2D3-209ENST00000394804 IDI1Q13907 227 aa14.38□□□□□ -0.11
UBE2D3-209ENST00000394804 TPRNQ4KMQ1 711 aa14.38□□□□□ -0.11
UBE2D3-209ENST00000394804 PTPRTO14522 1441 aa14.38□□□□□ -0.11
UBE2D3-209ENST00000394804 SBNO2Q9Y2G9 1366 aa14.38□□□□□ -0.11
UBE2D3-209ENST00000394804 TRIM6-TRIM34B2RNG4 842 aa14.38□□□□□ -0.11
UBE2D3-209ENST00000394804 LAMC1P11047 1609 aa14.38□□□□□ -0.11
UBE2D3-209ENST00000394804 NUTM2FA1L443 756 aa14.38□□□□□ -0.11
UBE2D3-209ENST00000394804 DNTTIP2Q5QJE6 756 aaKnown RBP14.37□□□□□ -0.11
UBE2D3-209ENST00000394804 ERVK-7P63135 1459 aa14.37□□□□□ -0.11
UBE2D3-209ENST00000394804 CFAP65Q6ZU64 1925 aaKnown RBP14.37□□□□□ -0.11
UBE2D3-209ENST00000394804 K7ELQ4 463 aaPredicted RBP14.36□□□□□ -0.11
UBE2D3-209ENST00000394804 SYAP1Q96A49 352 aaPredicted RBP14.36□□□□□ -0.11
UBE2D3-209ENST00000394804 AGLP35573 1532 aa14.36□□□□□ -0.11
UBE2D3-209ENST00000394804 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.36□□□□□ -0.11
UBE2D3-209ENST00000394804 RABEP1Q15276 862 aa14.36□□□□□ -0.11
UBE2D3-209ENST00000394804 AMPHP49418 695 aa14.35□□□□□ -0.11
UBE2D3-209ENST00000394804 THUMPD2Q9BTF0 503 aaKnown RBP14.35□□□□□ -0.11
UBE2D3-209ENST00000394804 MADDQ8WXG6 1647 aa14.35□□□□□ -0.11
UBE2D3-209ENST00000394804 KIAA1211Q6ZU35 1233 aa14.34□□□□□ -0.11
UBE2D3-209ENST00000394804 GRPEL1Q9HAV7 217 aa14.34□□□□□ -0.11
UBE2D3-209ENST00000394804 PPP6R1Q9UPN7 881 aa14.34□□□□□ -0.11
UBE2D3-209ENST00000394804 FYB1O15117 783 aa14.34□□□□□ -0.11
UBE2D3-209ENST00000394804 NGDNQ8NEJ9 315 aaKnown RBP14.34□□□□□ -0.11
UBE2D3-209ENST00000394804 BMP2KLQ5H9B9 411 aa14.33□□□□□ -0.12
UBE2D3-209ENST00000394804 NOL8Q76FK4 1167 aaKnown RBP14.33□□□□□ -0.12
UBE2D3-209ENST00000394804 REREQ9P2R6 1566 aa14.33□□□□□ -0.12
UBE2D3-209ENST00000394804 KCNJ4P48050 445 aa14.33□□□□□ -0.12
UBE2D3-209ENST00000394804 MYOM2P54296 1465 aa14.33□□□□□ -0.12
UBE2D3-209ENST00000394804 FOXD4L5Q5VV16 416 aaPredicted RBP14.33□□□□□ -0.12
UBE2D3-209ENST00000394804 MCTP1Q6DN14 999 aa14.33□□□□□ -0.12
UBE2D3-209ENST00000394804 FOXD4L4Q8WXT5 416 aaPredicted RBP14.33□□□□□ -0.12
UBE2D3-209ENST00000394804 IFT57Q9NWB7 429 aa14.33□□□□□ -0.12
UBE2D3-209ENST00000394804 PLEKHG5O94827 1062 aa14.33□□□□□ -0.12
UBE2D3-209ENST00000394804 PLCB2Q00722 1185 aa14.33□□□□□ -0.12
UBE2D3-209ENST00000394804 NCBP3Q53F19 620 aaKnown RBP14.33□□□□□ -0.12
UBE2D3-209ENST00000394804 E9PCH4 1651 aa14.32□□□□□ -0.12
UBE2D3-209ENST00000394804 RILPL2Q969X0 211 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms