RNA–Protein interactions for RNA: ENST00000394768.6

SYNE2-205, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 11,095 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-205ENST00000394768 CCDC146Q8IYE0 955 aa8.83□□□□□ -1
SYNE2-205ENST00000394768 CCDC150Q8NCX0 1101 aa8.83□□□□□ -1
SYNE2-205ENST00000394768 FYCO1Q9BQS8 1478 aa8.83□□□□□ -1
SYNE2-205ENST00000394768 ERLIN1O75477 346 aa8.83□□□□□ -1
SYNE2-205ENST00000394768 NF2P35240 595 aa8.83□□□□□ -1
SYNE2-205ENST00000394768 SOGA3Q5TF21 947 aa8.83□□□□□ -1
SYNE2-205ENST00000394768 CCDC30Q5VVM6 783 aa8.83□□□□□ -1
SYNE2-205ENST00000394768 TMOD2Q9NZR1 351 aa8.83□□□□□ -1
SYNE2-205ENST00000394768 TSPYL4Q9UJ04 414 aa8.83□□□□□ -1
SYNE2-205ENST00000394768 NOL7Q9UMY1 257 aaKnown RBP8.82□□□□□ -1
SYNE2-205ENST00000394768 CT47B1P0C2W7 299 aaPredicted RBP8.82□□□□□ -1
SYNE2-205ENST00000394768 FOXD4L5Q5VV16 416 aaPredicted RBP8.82□□□□□ -1
SYNE2-205ENST00000394768 FOXD4L4Q8WXT5 416 aaPredicted RBP8.82□□□□□ -1
SYNE2-205ENST00000394768 SEPT11Q9NVA2 429 aaKnown RBP8.82□□□□□ -1
SYNE2-205ENST00000394768 CCDC181Q5TID7 509 aa8.82□□□□□ -1
SYNE2-205ENST00000394768 FOXD4L1Q9NU39 408 aa8.82□□□□□ -1
SYNE2-205ENST00000394768 GIGYF2Q6Y7W6 1299 aaKnown RBP8.82□□□□□ -1
SYNE2-205ENST00000394768 HMGN5P82970 282 aaKnown RBP8.82□□□□□ -1
SYNE2-205ENST00000394768 SLC26A8Q96RN1 970 aa8.82□□□□□ -1
SYNE2-205ENST00000394768 ANKRD62A6NC57 917 aa8.82□□□□□ -1
SYNE2-205ENST00000394768 PDILTQ8N807 584 aa8.82□□□□□ -1
SYNE2-205ENST00000394768 MPHOSPH6Q99547 160 aaKnown RBP8.81□□□□□ -1
SYNE2-205ENST00000394768 CBFA2T2O43439 604 aa8.81□□□□□ -1
SYNE2-205ENST00000394768 WASF1Q92558 559 aa8.81□□□□□ -1
SYNE2-205ENST00000394768 FERMT1Q9BQL6 677 aa8.81□□□□□ -1
SYNE2-205ENST00000394768 NUTM2FA1L443 756 aa8.81□□□□□ -1
SYNE2-205ENST00000394768 FYB1O15117 783 aa8.81□□□□□ -1
SYNE2-205ENST00000394768 HMGB1P1B2RPK0 211 aaPredicted RBP8.81□□□□□ -1
SYNE2-205ENST00000394768 PNISRQ8TF01 805 aaKnown RBP8.81□□□□□ -1
SYNE2-205ENST00000394768 PLEKHO1Q53GL0 409 aaPredicted RBP8.81□□□□□ -1
SYNE2-205ENST00000394768 RUNDC1Q96C34 613 aa8.81□□□□□ -1
SYNE2-205ENST00000394768 ZBED9Q6R2W3 1325 aa8.81□□□□□ -1
SYNE2-205ENST00000394768 GSE1Q14687 1217 aa8.81□□□□□ -1
SYNE2-205ENST00000394768 ANAPC15P60006 121 aa8.8□□□□□ -1
SYNE2-205ENST00000394768 PPFIBP1Q86W92 1011 aa8.8□□□□□ -1
SYNE2-205ENST00000394768 OSCARQ8IYS5 282 aa8.8□□□□□ -1
SYNE2-205ENST00000394768 FSD1Q9BTV5 496 aa8.8□□□□□ -1
SYNE2-205ENST00000394768 PABPN1LA6NDY0 278 aaKnown RBP8.8□□□□□ -1
SYNE2-205ENST00000394768 AXDND1Q5T1B0 1012 aaPredicted RBP8.8□□□□□ -1
SYNE2-205ENST00000394768 ANKRD18BA2A2Z9 1011 aa8.8□□□□□ -1
SYNE2-205ENST00000394768 HNRNPMP52272 730 aaKnown RBP eCLIP8.8□□□□□ -1
SYNE2-205ENST00000394768 RIPK4P57078 832 aa8.8□□□□□ -1
SYNE2-205ENST00000394768 NLRP2Q9NX02 1062 aa8.8□□□□□ -1
SYNE2-205ENST00000394768 TOP2AP11388 1531 aaKnown RBP8.8□□□□□ -1
SYNE2-205ENST00000394768 CECR2Q9BXF3 1484 aa8.8□□□□□ -1
SYNE2-205ENST00000394768 POGZQ7Z3K3 1410 aa8.8□□□□□ -1
SYNE2-205ENST00000394768 FAM13BQ9NYF5 915 aa8.8□□□□□ -1
SYNE2-205ENST00000394768 USP47Q96K76 1375 aa8.8□□□□□ -1
SYNE2-205ENST00000394768 GOLGA6L10A0A0M3HER8 536 aa8.79□□□□□ -1
SYNE2-205ENST00000394768 VPS36Q86VN1 386 aa8.79□□□□□ -1
SYNE2-205ENST00000394768 SPDYE4A6NLX3 237 aa8.79□□□□□ -1
SYNE2-205ENST00000394768 CDC45O75419 566 aa8.79□□□□□ -1
SYNE2-205ENST00000394768 LRRC45Q96CN5 670 aa8.79□□□□□ -1
SYNE2-205ENST00000394768 TSPYL1Q9H0U9 437 aa8.79□□□□□ -1
SYNE2-205ENST00000394768 AEBP1Q8IUX7 1158 aa8.79□□□□□ -1
SYNE2-205ENST00000394768 ZNF710Q8N1W2 664 aa8.79□□□□□ -1
SYNE2-205ENST00000394768 ZNF397Q8NF99 534 aaPredicted RBP8.79□□□□□ -1
SYNE2-205ENST00000394768 DRC1Q96MC2 740 aa8.79□□□□□ -1
SYNE2-205ENST00000394768 EHMT1Q9H9B1 1298 aa8.79□□□□□ -1
SYNE2-205ENST00000394768 EPB41L2O43491 1005 aaKnown RBP8.79□□□□□ -1
SYNE2-205ENST00000394768 PTPRGP23470 1445 aa8.79□□□□□ -1
SYNE2-205ENST00000394768 CNNM1Q9NRU3 951 aa8.79□□□□□ -1
SYNE2-205ENST00000394768 MATR3P43243 847 aaKnown RBP eCLIP8.79□□□□□ -1
SYNE2-205ENST00000394768 HOMER2Q9NSB8 354 aa8.79□□□□□ -1
SYNE2-205ENST00000394768 MCM3P25205 808 aa8.78□□□□□ -1
SYNE2-205ENST00000394768 CCDC69A6NI79 296 aa8.78□□□□□ -1
SYNE2-205ENST00000394768 TTC39AQ5SRH9 613 aa8.78□□□□□ -1
SYNE2-205ENST00000394768 CEP131Q9UPN4 1083 aa8.78□□□□□ -1
SYNE2-205ENST00000394768 VSIG10Q8N0Z9 540 aa8.78□□□□□ -1
SYNE2-205ENST00000394768 MYOM3Q5VTT5 1437 aa8.78□□□□□ -1
SYNE2-205ENST00000394768 ZNF652Q9Y2D9 606 aa8.78□□□□□ -1
SYNE2-205ENST00000394768 PPM1FP49593 454 aaPredicted RBP8.78□□□□□ -1
SYNE2-205ENST00000394768 KIF20AO95235 890 aa8.78□□□□□ -1
SYNE2-205ENST00000394768 DDX12PQ92771 950 aa8.78□□□□□ -1
SYNE2-205ENST00000394768 RAB34Q9BZG1 259 aa8.78□□□□□ -1
SYNE2-205ENST00000394768 PANK3Q9H999 370 aa8.78□□□□□ -1
SYNE2-205ENST00000394768 CTNNA3Q9UI47 895 aa8.78□□□□□ -1
SYNE2-205ENST00000394768 FAM43AQ8N2R8 423 aa8.77□□□□□ -1
SYNE2-205ENST00000394768 MPHOSPH8Q99549 860 aa8.77□□□□□ -1.01
SYNE2-205ENST00000394768 MINK1Q8N4C8 1332 aaPredicted RBP8.77□□□□□ -1.01
SYNE2-205ENST00000394768 DYDC1Q8WWB3 177 aa8.77□□□□□ -1.01
SYNE2-205ENST00000394768 PPP1R1BQ9UD71 204 aaPredicted RBP8.77□□□□□ -1.01
SYNE2-205ENST00000394768 SLF2Q8IX21 1173 aa8.77□□□□□ -1.01
SYNE2-205ENST00000394768 TRIM5Q9C035 493 aa8.77□□□□□ -1.01
SYNE2-205ENST00000394768 SRCIN1Q9C0H9 1055 aa8.77□□□□□ -1.01
SYNE2-205ENST00000394768 FGFR1OPO95684 399 aaKnown RBP8.77□□□□□ -1.01
SYNE2-205ENST00000394768 RBM5P52756 815 aaKnown RBP eCLIP8.77□□□□□ -1.01
SYNE2-205ENST00000394768 TATP17735 454 aaPredicted RBP8.76□□□□□ -1.01
SYNE2-205ENST00000394768 ZNF76P36508 570 aa8.76□□□□□ -1.01
SYNE2-205ENST00000394768 STK38Q15208 465 aa8.76□□□□□ -1.01
SYNE2-205ENST00000394768 SEC63Q9UGP8 760 aaKnown RBP8.76□□□□□ -1.01
SYNE2-205ENST00000394768 RRP1P56182 461 aaKnown RBP8.76□□□□□ -1.01
SYNE2-205ENST00000394768 FOXD4L6Q3SYB3 417 aaPredicted RBP8.76□□□□□ -1.01
SYNE2-205ENST00000394768 FOXD4L3Q6VB84 417 aaPredicted RBP8.76□□□□□ -1.01
SYNE2-205ENST00000394768 CFAP45Q9UL16 551 aa8.76□□□□□ -1.01
SYNE2-205ENST00000394768 SPG7Q9UQ90 795 aa8.76□□□□□ -1.01
SYNE2-205ENST00000394768 IMMTQ16891 758 aaKnown RBP8.76□□□□□ -1.01
SYNE2-205ENST00000394768 TANGO6Q9C0B7 1094 aa8.76□□□□□ -1.01
SYNE2-205ENST00000394768 NUTM2DQ5VT03 806 aaPredicted RBP8.76□□□□□ -1.01
SYNE2-205ENST00000394768 ATP2B2Q01814 1243 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms