RNA–Protein interactions for RNA: ENST00000394348.2

MITF-205, Transcript of melanogenesis associated transcription factor, human

TSL 1 (best) BASIC

Gene MITF, Length 1,069 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MITF-205	ENST00000394348	CPSF1	Q10570	1443 aa	Known RBP	12.17	□□□□□ -0.46
MITF-205	ENST00000394348	PTCH1	Q13635	1447 aa		12.17	□□□□□ -0.46
MITF-205	ENST00000394348	EDC4	Q6P2E9	1401 aa	Known RBP	12.17	□□□□□ -0.46
MITF-205	ENST00000394348	COL3A1	P02461	1466 aa	Predicted RBP	12.16	□□□□□ -0.46
MITF-205	ENST00000394348	AKAP12	Q02952	1782 aa		12.16	□□□□□ -0.46
MITF-205	ENST00000394348	WASL	O00401	505 aa	Predicted RBP	12.16	□□□□□ -0.46
MITF-205	ENST00000394348	GOLGA2	Q08379	1002 aa		12.16	□□□□□ -0.46
MITF-205	ENST00000394348	EID1	Q9Y6B2	187 aa		12.16	□□□□□ -0.46
MITF-205	ENST00000394348	TOPAZ1	Q8N9V7	1692 aa		12.16	□□□□□ -0.46
MITF-205	ENST00000394348	ITSN1	Q15811	1721 aa		12.15	□□□□□ -0.46
MITF-205	ENST00000394348	IRX6	P78412	446 aa	Predicted RBP	12.15	□□□□□ -0.46
MITF-205	ENST00000394348	TRMT2A	Q8IZ69	625 aa	Known RBP	12.15	□□□□□ -0.46
MITF-205	ENST00000394348	CLEC11A	Q9Y240	323 aa		12.15	□□□□□ -0.46
MITF-205	ENST00000394348	ZNF142	P52746	1687 aa	Predicted RBP	12.15	□□□□□ -0.46
MITF-205	ENST00000394348	MTHFS	P49914	203 aa		12.14	□□□□□ -0.47
MITF-205	ENST00000394348	DUSP27	Q5VZP5	1158 aa		12.14	□□□□□ -0.47
MITF-205	ENST00000394348	RUNDC1	Q96C34	613 aa		12.14	□□□□□ -0.47
MITF-205	ENST00000394348	TSHZ2	Q9NRE2	1034 aa		12.14	□□□□□ -0.47
MITF-205	ENST00000394348	PNPLA6	Q8IY17	1366 aa		12.14	□□□□□ -0.47
MITF-205	ENST00000394348	PIK3R4	Q99570	1358 aa		12.14	□□□□□ -0.47
MITF-205	ENST00000394348	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	12.13	□□□□□ -0.47
MITF-205	ENST00000394348	RIMS1	Q86UR5	1692 aa	Known RBP	12.13	□□□□□ -0.47
MITF-205	ENST00000394348	PPIP5K1	Q6PFW1	1433 aa		12.13	□□□□□ -0.47
MITF-205	ENST00000394348		E9PSI1	815 aa		12.13	□□□□□ -0.47
MITF-205	ENST00000394348	FYB1	O15117	783 aa		12.13	□□□□□ -0.47
MITF-205	ENST00000394348	SLFN5	Q08AF3	891 aa		12.13	□□□□□ -0.47
MITF-205	ENST00000394348	CCDC27	Q2M243	656 aa		12.13	□□□□□ -0.47
MITF-205	ENST00000394348	WAPL	Q7Z5K2	1190 aa		12.13	□□□□□ -0.47
MITF-205	ENST00000394348	THEMIS	Q8N1K5	641 aa	Predicted RBP	12.13	□□□□□ -0.47
MITF-205	ENST00000394348	CDCA7L	Q96GN5	454 aa		12.13	□□□□□ -0.47
MITF-205	ENST00000394348	TBX22	Q9Y458	520 aa		12.13	□□□□□ -0.47
MITF-205	ENST00000394348	XRN1	Q8IZH2	1706 aa	Known RBP	12.13	□□□□□ -0.47
MITF-205	ENST00000394348	NKTR	P30414	1462 aa	Known RBP	12.13	□□□□□ -0.47
MITF-205	ENST00000394348	CABP1	Q9NZU7	370 aa		12.12	□□□□□ -0.47
MITF-205	ENST00000394348	ROBO2	Q9HCK4	1378 aa		12.12	□□□□□ -0.47
MITF-205	ENST00000394348	ADAMTSL3	P82987	1691 aa		12.12	□□□□□ -0.47
MITF-205	ENST00000394348	NRK	Q7Z2Y5	1582 aa		12.11	□□□□□ -0.47
MITF-205	ENST00000394348	AATK	Q6ZMQ8	1374 aa		12.11	□□□□□ -0.47
MITF-205	ENST00000394348	APAF1	O14727	1248 aa		12.11	□□□□□ -0.47
MITF-205	ENST00000394348	LTK	P29376	864 aa		12.11	□□□□□ -0.47
MITF-205	ENST00000394348	TXNDC2	Q86VQ3	553 aa		12.11	□□□□□ -0.47
MITF-205	ENST00000394348	SALL2	Q9Y467	1007 aa	Predicted RBP	12.11	□□□□□ -0.47
MITF-205	ENST00000394348	CCDC61	Q9Y6R9	512 aa		12.11	□□□□□ -0.47
MITF-205	ENST00000394348	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	12.11	□□□□□ -0.47
MITF-205	ENST00000394348	PNN	Q9H307	717 aa	Known RBP	12.1	□□□□□ -0.47
MITF-205	ENST00000394348	CDK12	Q9NYV4	1490 aa	Predicted RBP	12.09	□□□□□ -0.47
MITF-205	ENST00000394348	WDR63	Q8IWG1	891 aa		12.09	□□□□□ -0.47
MITF-205	ENST00000394348	CCDC146	Q8IYE0	955 aa		12.09	□□□□□ -0.47
MITF-205	ENST00000394348	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	12.09	□□□□□ -0.47
MITF-205	ENST00000394348	NUDT16	Q96DE0	195 aa	Known RBP	12.09	□□□□□ -0.47
MITF-205	ENST00000394348	PTPRU	Q92729	1446 aa		12.09	□□□□□ -0.47
MITF-205	ENST00000394348	GGNBP2	Q9H3C7	697 aa		12.08	□□□□□ -0.48
MITF-205	ENST00000394348	TNNT2	P45379	298 aa	Predicted RBP	12.07	□□□□□ -0.48
MITF-205	ENST00000394348	CEBPA	P49715	358 aa	Predicted RBP	12.07	□□□□□ -0.48
MITF-205	ENST00000394348	ANKAR	Q7Z5J8	1434 aa		12.07	□□□□□ -0.48
MITF-205	ENST00000394348	WWC1	Q8IX03	1113 aa		12.07	□□□□□ -0.48
MITF-205	ENST00000394348	CCDC136	Q96JN2	1154 aa		12.07	□□□□□ -0.48
MITF-205	ENST00000394348	LRRC7	Q96NW7	1537 aa		12.06	□□□□□ -0.48
MITF-205	ENST00000394348	SENP3-EIF4A1	A0A087X0R7	540 aa		12.06	□□□□□ -0.48
MITF-205	ENST00000394348	PLEKHG3	A1L390	1219 aa		12.06	□□□□□ -0.48
MITF-205	ENST00000394348	B4GALNT3	Q6L9W6	998 aa		12.06	□□□□□ -0.48
MITF-205	ENST00000394348	POTEH	Q6S545	545 aa		12.06	□□□□□ -0.48
MITF-205	ENST00000394348	PROM2	Q8N271	834 aa		12.06	□□□□□ -0.48
MITF-205	ENST00000394348	NALCN	Q8IZF0	1738 aa		12.06	□□□□□ -0.48
MITF-205	ENST00000394348	SETD1B	Q9UPS6	1966 aa	Known RBP	12.05	□□□□□ -0.48
MITF-205	ENST00000394348	TCP11L2	Q8N4U5	519 aa		12.05	□□□□□ -0.48
MITF-205	ENST00000394348	DIAPH1	O60610	1272 aa	Known RBP	12.04	□□□□□ -0.48
MITF-205	ENST00000394348	U2AF1L5	P0DN76	240 aa	Predicted RBP	12.04	□□□□□ -0.48
MITF-205	ENST00000394348	U2AF1	Q01081	240 aa	Known RBP eCLIP	12.04	□□□□□ -0.48
MITF-205	ENST00000394348	IL16	Q14005	1332 aa		12.04	□□□□□ -0.48
MITF-205	ENST00000394348	PRR36	Q9H6K5	1346 aa		12.04	□□□□□ -0.48
MITF-205	ENST00000394348	MAP2	P11137	1827 aa	Known RBP	12.03	□□□□□ -0.48
MITF-205	ENST00000394348	CT47B1	P0C2W7	299 aa	Predicted RBP	12.03	□□□□□ -0.48
MITF-205	ENST00000394348	PLEKHF1	Q96S99	279 aa		12.03	□□□□□ -0.48
MITF-205	ENST00000394348	USP54	Q70EL1	1684 aa		12.03	□□□□□ -0.48
MITF-205	ENST00000394348	OVOS2	A0A0J9YW53	1432 aa		12.03	□□□□□ -0.48
MITF-205	ENST00000394348	USP6	P35125	1406 aa		12.03	□□□□□ -0.48
MITF-205	ENST00000394348	OVOS2	Q6IE36	1432 aa		12.03	□□□□□ -0.48
MITF-205	ENST00000394348	SSH2	Q76I76	1423 aa		12.03	□□□□□ -0.48
MITF-205	ENST00000394348	FCHSD2	O94868	740 aa		12.02	□□□□□ -0.49
MITF-205	ENST00000394348	PIP4P2	Q8N4L2	257 aa		12.02	□□□□□ -0.49
MITF-205	ENST00000394348	COG3	Q96JB2	828 aa		12.02	□□□□□ -0.49
MITF-205	ENST00000394348	POLK	Q9UBT6	870 aa		12.02	□□□□□ -0.49
MITF-205	ENST00000394348	AMOTL2	Q9Y2J4	779 aa		12.02	□□□□□ -0.49
MITF-205	ENST00000394348	FMN2	Q9NZ56	1722 aa		12.02	□□□□□ -0.49
MITF-205	ENST00000394348	EXOC6	Q8TAG9	804 aa		12.01	□□□□□ -0.49
MITF-205	ENST00000394348	MYH16	Q9H6N6	1097 aa		12.01	□□□□□ -0.49
MITF-205	ENST00000394348	CHD2	O14647	1828 aa	Known RBP	12.01	□□□□□ -0.49
MITF-205	ENST00000394348	TTC21A	Q8NDW8	1320 aa		12.01	□□□□□ -0.49
MITF-205	ENST00000394348	MAPK8IP3	Q9UPT6	1336 aa		12.01	□□□□□ -0.49
MITF-205	ENST00000394348	USP31	Q70CQ4	1352 aa		12.01	□□□□□ -0.49
MITF-205	ENST00000394348	FXR2	P51116	673 aa	Known RBP eCLIP	12	□□□□□ -0.49
MITF-205	ENST00000394348	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	12	□□□□□ -0.49
MITF-205	ENST00000394348	SLC26A8	Q96RN1	970 aa		12	□□□□□ -0.49
MITF-205	ENST00000394348	PRR29	P0C7W0	189 aa		11.99	□□□□□ -0.49
MITF-205	ENST00000394348	TMPO	P42166	694 aa	Known RBP	11.99	□□□□□ -0.49
MITF-205	ENST00000394348	AAMP	Q13685	434 aa		11.99	□□□□□ -0.49
MITF-205	ENST00000394348	PDE3A	Q14432	1141 aa		11.99	□□□□□ -0.49
MITF-205	ENST00000394348	TTC21B	Q7Z4L5	1316 aa		11.99	□□□□□ -0.49
MITF-205	ENST00000394348	ACE	P12821	1306 aa		11.98	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms