RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 USP32Q8NFA0 1604 aa23.68■■□□□ 1.38
HOXC6-202ENST00000394331 DDIT3P35638 169 aa23.68■■□□□ 1.38
HOXC6-202ENST00000394331 PIK3C2BO00750 1634 aa23.68■■□□□ 1.38
HOXC6-202ENST00000394331 CFAP53Q96M91 514 aa23.67■■□□□ 1.38
HOXC6-202ENST00000394331 HS1BP3Q53T59 392 aa23.67■■□□□ 1.38
HOXC6-202ENST00000394331 PMFBP1Q8TBY8 1022 aa23.66■■□□□ 1.38
HOXC6-202ENST00000394331 NSD2O96028 1365 aa23.66■■□□□ 1.38
HOXC6-202ENST00000394331 IBTKQ9P2D0 1353 aaPredicted RBP23.66■■□□□ 1.38
HOXC6-202ENST00000394331 GLI2P10070 1586 aa23.66■■□□□ 1.38
HOXC6-202ENST00000394331 BCAR3O75815 825 aa23.66■■□□□ 1.38
HOXC6-202ENST00000394331 SLC52A1Q9NWF4 448 aa23.66■■□□□ 1.38
HOXC6-202ENST00000394331 DIP2CQ9Y2E4 1556 aa23.65■■□□□ 1.38
HOXC6-202ENST00000394331 NEXMIFQ5QGS0 1516 aa23.65■■□□□ 1.38
HOXC6-202ENST00000394331 ANKRD36BQ8N2N9 1353 aa23.65■■□□□ 1.38
HOXC6-202ENST00000394331 TNNT2P45379 298 aaPredicted RBP23.65■■□□□ 1.38
HOXC6-202ENST00000394331 CIZ1Q9ULV3 898 aaPredicted RBP23.65■■□□□ 1.38
HOXC6-202ENST00000394331 DMRT2Q9Y5R5 561 aa23.65■■□□□ 1.38
HOXC6-202ENST00000394331 ZFYVE9O95405 1425 aa23.64■■□□□ 1.38
HOXC6-202ENST00000394331 UTP14CQ5TAP6 766 aaKnown RBP23.64■■□□□ 1.37
HOXC6-202ENST00000394331 GAS2L3Q86XJ1 694 aa23.63■■□□□ 1.37
HOXC6-202ENST00000394331 SIGLEC1Q9BZZ2 1709 aa23.63■■□□□ 1.37
HOXC6-202ENST00000394331 MTHFSP49914 203 aa23.63■■□□□ 1.37
HOXC6-202ENST00000394331 IDI1Q13907 227 aa23.62■■□□□ 1.37
HOXC6-202ENST00000394331 NCBP3Q53F19 620 aaKnown RBP23.61■■□□□ 1.37
HOXC6-202ENST00000394331 SHPRHQ149N8 1683 aa23.61■■□□□ 1.37
HOXC6-202ENST00000394331 NUTM2DQ5VT03 806 aaPredicted RBP23.61■■□□□ 1.37
HOXC6-202ENST00000394331 WDR63Q8IWG1 891 aa23.6■■□□□ 1.37
HOXC6-202ENST00000394331 TCP11L2Q8N4U5 519 aa23.6■■□□□ 1.37
HOXC6-202ENST00000394331 PHF23Q9BUL5 403 aaPredicted RBP23.6■■□□□ 1.37
HOXC6-202ENST00000394331 MSNP26038 577 aaKnown RBP23.6■■□□□ 1.37
HOXC6-202ENST00000394331 GBP4Q96PP9 640 aa23.6■■□□□ 1.37
HOXC6-202ENST00000394331 TULP4Q9NRJ4 1543 aa23.6■■□□□ 1.37
HOXC6-202ENST00000394331 A0A0U1RQG5 324 aaPredicted RBP23.59■■□□□ 1.37
HOXC6-202ENST00000394331 CCDC27Q2M243 656 aa23.59■■□□□ 1.37
HOXC6-202ENST00000394331 ARHGEF28Q8N1W1 1705 aaKnown RBP23.58■■□□□ 1.37
HOXC6-202ENST00000394331 IQSEC2Q5JU85 1478 aa23.58■■□□□ 1.37
HOXC6-202ENST00000394331 ZNF500O60304 480 aaPredicted RBP23.58■■□□□ 1.36
HOXC6-202ENST00000394331 C22orf23Q9BZE7 217 aa23.58■■□□□ 1.36
HOXC6-202ENST00000394331 DYNC1I1O14576 645 aa23.57■■□□□ 1.36
HOXC6-202ENST00000394331 HSCBQ8IWL3 235 aa23.57■■□□□ 1.36
HOXC6-202ENST00000394331 CANXP27824 592 aaKnown RBP23.57■■□□□ 1.36
HOXC6-202ENST00000394331 ANP32BQ92688 251 aaKnown RBP23.57■■□□□ 1.36
HOXC6-202ENST00000394331 NEUROD2Q15784 382 aa23.56■■□□□ 1.36
HOXC6-202ENST00000394331 SNX21Q969T3 373 aa23.56■■□□□ 1.36
HOXC6-202ENST00000394331 CABP2Q9NPB3 220 aa23.56■■□□□ 1.36
HOXC6-202ENST00000394331 SMC5Q8IY18 1101 aa23.55■■□□□ 1.36
HOXC6-202ENST00000394331 NASPP49321 788 aaPredicted RBP23.55■■□□□ 1.36
HOXC6-202ENST00000394331 RRP7AQ9Y3A4 280 aaKnown RBP23.54■■□□□ 1.36
HOXC6-202ENST00000394331 RICTORQ6R327 1708 aa23.54■■□□□ 1.36
HOXC6-202ENST00000394331 SPRYD3Q8NCJ5 442 aa23.53■■□□□ 1.36
HOXC6-202ENST00000394331 FAM13BQ9NYF5 915 aa23.53■■□□□ 1.36
HOXC6-202ENST00000394331 RAB3GAP1Q15042 981 aa23.53■■□□□ 1.36
HOXC6-202ENST00000394331 PDZRN3Q9UPQ7 1066 aa23.53■■□□□ 1.36
HOXC6-202ENST00000394331 YEATS2Q9ULM3 1422 aa23.52■■□□□ 1.36
HOXC6-202ENST00000394331 TNPO1Q92973 898 aaKnown RBP23.52■■□□□ 1.36
HOXC6-202ENST00000394331 NCLP19338 710 aaKnown RBP23.52■■□□□ 1.36
HOXC6-202ENST00000394331 DMTNQ08495 405 aa23.52■■□□□ 1.36
HOXC6-202ENST00000394331 NOL7Q9UMY1 257 aaKnown RBP23.52■■□□□ 1.36
HOXC6-202ENST00000394331 RARSP54136 660 aaKnown RBP23.51■■□□□ 1.35
HOXC6-202ENST00000394331 ABCC11Q96J66 1382 aa23.51■■□□□ 1.35
HOXC6-202ENST00000394331 ATAD2Q6PL18 1390 aa23.5■■□□□ 1.35
HOXC6-202ENST00000394331 SRPK2P78362 688 aaKnown RBP23.5■■□□□ 1.35
HOXC6-202ENST00000394331 CSPP1Q1MSJ5 1256 aa23.5■■□□□ 1.35
HOXC6-202ENST00000394331 U2AF1L5P0DN76 240 aaPredicted RBP23.5■■□□□ 1.35
HOXC6-202ENST00000394331 U2AF1Q01081 240 aaKnown RBP eCLIP23.5■■□□□ 1.35
HOXC6-202ENST00000394331 STK26Q9P289 416 aa23.5■■□□□ 1.35
HOXC6-202ENST00000394331 SAFB2Q14151 953 aaKnown RBP eCLIP23.49■■□□□ 1.35
HOXC6-202ENST00000394331 CLEC17AQ6ZS10 378 aa23.49■■□□□ 1.35
HOXC6-202ENST00000394331 MCM5P33992 734 aa23.49■■□□□ 1.35
HOXC6-202ENST00000394331 COG6Q9Y2V7 657 aa23.49■■□□□ 1.35
HOXC6-202ENST00000394331 PANK1Q8TE04 598 aa23.48■■□□□ 1.35
HOXC6-202ENST00000394331 A0A1W2PP64 1363 aa23.48■■□□□ 1.35
HOXC6-202ENST00000394331 UQCRHLA0A096LP55 91 aa23.48■■□□□ 1.35
HOXC6-202ENST00000394331 UQCRHP07919 91 aa23.48■■□□□ 1.35
HOXC6-202ENST00000394331 RWDD1Q9H446 243 aaPredicted RBP23.48■■□□□ 1.35
HOXC6-202ENST00000394331 TERF2IPQ9NYB0 399 aa23.48■■□□□ 1.35
HOXC6-202ENST00000394331 R3HCC1Q9Y3T6 440 aaKnown RBP23.48■■□□□ 1.35
HOXC6-202ENST00000394331 TMEM131LA2VDJ0 1609 aa23.46■■□□□ 1.35
HOXC6-202ENST00000394331 RBM25P49756 843 aaKnown RBP23.46■■□□□ 1.35
HOXC6-202ENST00000394331 PDLIM2Q96JY6 352 aa23.45■■□□□ 1.34
HOXC6-202ENST00000394331 CCDC94Q9BW85 323 aaPredicted RBP23.45■■□□□ 1.34
HOXC6-202ENST00000394331 PREX1Q8TCU6 1659 aa23.45■■□□□ 1.34
HOXC6-202ENST00000394331 PTPRMP28827 1452 aa23.44■■□□□ 1.34
HOXC6-202ENST00000394331 PCDHB15Q9Y5E8 787 aa23.44■■□□□ 1.34
HOXC6-202ENST00000394331 KLHL40Q2TBA0 621 aa23.44■■□□□ 1.34
HOXC6-202ENST00000394331 YTHDC2Q9H6S0 1430 aaKnown RBP23.44■■□□□ 1.34
HOXC6-202ENST00000394331 PRAM1Q96QH2 718 aa23.43■■□□□ 1.34
HOXC6-202ENST00000394331 ZNF445P59923 1031 aa23.43■■□□□ 1.34
HOXC6-202ENST00000394331 CT47B1P0C2W7 299 aaPredicted RBP23.43■■□□□ 1.34
HOXC6-202ENST00000394331 MED14O60244 1454 aa23.42■■□□□ 1.34
HOXC6-202ENST00000394331 SASS6Q6UVJ0 657 aa23.41■■□□□ 1.34
HOXC6-202ENST00000394331 MINK1Q8N4C8 1332 aaPredicted RBP23.41■■□□□ 1.34
HOXC6-202ENST00000394331 ADGRB2O60241 1585 aa23.41■■□□□ 1.34
HOXC6-202ENST00000394331 GGNBP2Q9H3C7 697 aa23.41■■□□□ 1.34
HOXC6-202ENST00000394331 GOLGA6L22H0YM25 854 aa23.39■■□□□ 1.34
HOXC6-202ENST00000394331 MFAP1P55081 439 aaKnown RBP23.39■■□□□ 1.34
HOXC6-202ENST00000394331 FYB1O15117 783 aa23.39■■□□□ 1.33
HOXC6-202ENST00000394331 HDGFL2Q7Z4V5 671 aaPredicted RBP23.39■■□□□ 1.33
HOXC6-202ENST00000394331 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.39■■□□□ 1.33
HOXC6-202ENST00000394331 PPP6R1Q9UPN7 881 aa23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms