RNA–Protein interactions for RNA: ENST00000394320.7

PPARGC1B-203, Transcript of PPARG coactivator 1 beta, humanhuman

TSL 1 (best) BASIC

Gene PPARGC1B, Length 4,803 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1B-203ENST00000394320 NSD3Q9BZ95 1437 aa17.51■□□□□ 0.39
PPARGC1B-203ENST00000394320 WDR97A6NE52 1622 aa17.51■□□□□ 0.39
PPARGC1B-203ENST00000394320 CDCA7LQ96GN5 454 aa17.5■□□□□ 0.39
PPARGC1B-203ENST00000394320 C22orf23Q9BZE7 217 aa17.5■□□□□ 0.39
PPARGC1B-203ENST00000394320 NEUROD6Q96NK8 337 aa17.5■□□□□ 0.39
PPARGC1B-203ENST00000394320 RALYLQ86SE5 291 aaKnown RBP17.5■□□□□ 0.39
PPARGC1B-203ENST00000394320 PSMA5P28066 241 aa17.49■□□□□ 0.39
PPARGC1B-203ENST00000394320 SURF6O75683 361 aaKnown RBP17.49■□□□□ 0.39
PPARGC1B-203ENST00000394320 CCDC47Q96A33 483 aaKnown RBP17.49■□□□□ 0.39
PPARGC1B-203ENST00000394320 GOLGA6L19H0YKK7 550 aa17.48■□□□□ 0.39
PPARGC1B-203ENST00000394320 RTN4Q9NQC3 1192 aaKnown RBP17.48■□□□□ 0.39
PPARGC1B-203ENST00000394320 MCTP1Q6DN14 999 aa17.48■□□□□ 0.39
PPARGC1B-203ENST00000394320 HOOK1Q9UJC3 728 aaKnown RBP17.48■□□□□ 0.39
PPARGC1B-203ENST00000394320 SMC3Q9UQE7 1217 aa17.48■□□□□ 0.39
PPARGC1B-203ENST00000394320 VPS53Q5VIR6 699 aa17.48■□□□□ 0.39
PPARGC1B-203ENST00000394320 TOM1L2Q6ZVM7 507 aa17.48■□□□□ 0.39
PPARGC1B-203ENST00000394320 CABP4P57796 275 aa17.47■□□□□ 0.39
PPARGC1B-203ENST00000394320 PRDM11Q9NQV5 511 aa17.47■□□□□ 0.39
PPARGC1B-203ENST00000394320 TBC1D2BQ9UPU7 963 aa17.47■□□□□ 0.39
PPARGC1B-203ENST00000394320 ABCC11Q96J66 1382 aa17.47■□□□□ 0.39
PPARGC1B-203ENST00000394320 RPRD2Q5VT52 1461 aaKnown RBP17.47■□□□□ 0.39
PPARGC1B-203ENST00000394320 BECN2A8MW95 431 aa17.47■□□□□ 0.39
PPARGC1B-203ENST00000394320 NFE2L2Q16236 605 aa17.47■□□□□ 0.39
PPARGC1B-203ENST00000394320 TPM3P06753 285 aa17.46■□□□□ 0.39
PPARGC1B-203ENST00000394320 MCM2P49736 904 aa17.46■□□□□ 0.39
PPARGC1B-203ENST00000394320 SLC4A2P04920 1241 aa17.46■□□□□ 0.39
PPARGC1B-203ENST00000394320 TPM2P07951 284 aa17.46■□□□□ 0.39
PPARGC1B-203ENST00000394320 SAFBQ15424 915 aaKnown RBP eCLIP17.46■□□□□ 0.39
PPARGC1B-203ENST00000394320 ATF7IPQ6VMQ6 1270 aa17.46■□□□□ 0.39
PPARGC1B-203ENST00000394320 SRCIN1Q9C0H9 1055 aa17.46■□□□□ 0.39
PPARGC1B-203ENST00000394320 TPD52L1Q16890 204 aaPredicted RBP17.46■□□□□ 0.39
PPARGC1B-203ENST00000394320 FOXD4L5Q5VV16 416 aaPredicted RBP17.46■□□□□ 0.39
PPARGC1B-203ENST00000394320 FOXD4L4Q8WXT5 416 aaPredicted RBP17.46■□□□□ 0.39
PPARGC1B-203ENST00000394320 NFXL1Q6ZNB6 911 aa17.45■□□□□ 0.38
PPARGC1B-203ENST00000394320 NSD2O96028 1365 aa17.45■□□□□ 0.38
PPARGC1B-203ENST00000394320 GPATCH8Q9UKJ3 1502 aaKnown RBP17.45■□□□□ 0.38
PPARGC1B-203ENST00000394320 ANO8Q9HCE9 1232 aaPredicted RBP17.45■□□□□ 0.38
PPARGC1B-203ENST00000394320 STRN4Q9NRL3 753 aa17.45■□□□□ 0.38
PPARGC1B-203ENST00000394320 CTDP1Q9Y5B0 961 aaPredicted RBP17.45■□□□□ 0.38
PPARGC1B-203ENST00000394320 TPM1P09493 284 aa17.45■□□□□ 0.38
PPARGC1B-203ENST00000394320 RAPGEF6Q8TEU7 1601 aa17.45■□□□□ 0.38
PPARGC1B-203ENST00000394320 WASHC4Q2M389 1173 aa17.45■□□□□ 0.38
PPARGC1B-203ENST00000394320 TSR1Q2NL82 804 aaKnown RBP17.45■□□□□ 0.38
PPARGC1B-203ENST00000394320 SCAF11Q99590 1463 aaKnown RBP17.44■□□□□ 0.38
PPARGC1B-203ENST00000394320 FSD1Q9BTV5 496 aa17.44■□□□□ 0.38
PPARGC1B-203ENST00000394320 NOB1Q9ULX3 412 aaKnown RBP17.44■□□□□ 0.38
PPARGC1B-203ENST00000394320 RBM42Q9BTD8 480 aaKnown RBP17.44■□□□□ 0.38
PPARGC1B-203ENST00000394320 PLCH2O75038 1416 aa17.43■□□□□ 0.38
PPARGC1B-203ENST00000394320 IDI1Q13907 227 aa17.42■□□□□ 0.38
PPARGC1B-203ENST00000394320 TSR2Q969E8 191 aaKnown RBP17.42■□□□□ 0.38
PPARGC1B-203ENST00000394320 TEX14Q8IWB6 1497 aa17.42■□□□□ 0.38
PPARGC1B-203ENST00000394320 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.42■□□□□ 0.38
PPARGC1B-203ENST00000394320 ANKRD20A12PQ8NF67 263 aa17.41■□□□□ 0.38
PPARGC1B-203ENST00000394320 MVPQ14764 893 aaKnown RBP17.41■□□□□ 0.38
PPARGC1B-203ENST00000394320 SART3Q15020 963 aaKnown RBP17.41■□□□□ 0.38
PPARGC1B-203ENST00000394320 PDZRN3Q9UPQ7 1066 aa17.41■□□□□ 0.38
PPARGC1B-203ENST00000394320 TMPOP42166 694 aaKnown RBP17.41■□□□□ 0.38
PPARGC1B-203ENST00000394320 GNL3LQ9NVN8 582 aaKnown RBP17.41■□□□□ 0.38
PPARGC1B-203ENST00000394320 XBP1P17861 261 aa17.4■□□□□ 0.38
PPARGC1B-203ENST00000394320 CEP89Q96ST8 783 aa17.4■□□□□ 0.38
PPARGC1B-203ENST00000394320 C14orf93Q9H972 538 aaKnown RBP17.4■□□□□ 0.38
PPARGC1B-203ENST00000394320 ITSN2Q9NZM3 1697 aa17.4■□□□□ 0.38
PPARGC1B-203ENST00000394320 DHX16O60231 1041 aaKnown RBP17.4■□□□□ 0.38
PPARGC1B-203ENST00000394320 WASLO00401 505 aaPredicted RBP17.4■□□□□ 0.38
PPARGC1B-203ENST00000394320 TCEAL9Q9UHQ7 104 aa17.4■□□□□ 0.38
PPARGC1B-203ENST00000394320 GNAT3A8MTJ3 354 aa17.39■□□□□ 0.37
PPARGC1B-203ENST00000394320 RABEP1Q15276 862 aa17.39■□□□□ 0.37
PPARGC1B-203ENST00000394320 AMOTQ4VCS5 1084 aa17.39■□□□□ 0.37
PPARGC1B-203ENST00000394320 CCDC158Q5M9N0 1113 aa17.39■□□□□ 0.37
PPARGC1B-203ENST00000394320 RPAP2Q8IXW5 612 aaPredicted RBP17.39■□□□□ 0.37
PPARGC1B-203ENST00000394320 KDM5BQ9UGL1 1544 aa17.39■□□□□ 0.37
PPARGC1B-203ENST00000394320 BICD2Q8TD16 824 aa17.39■□□□□ 0.37
PPARGC1B-203ENST00000394320 VPS37CA5D8V6 355 aaPredicted RBP17.38■□□□□ 0.37
PPARGC1B-203ENST00000394320 ATP10BO94823 1461 aa17.38■□□□□ 0.37
PPARGC1B-203ENST00000394320 SLC4A3P48751 1232 aa17.38■□□□□ 0.37
PPARGC1B-203ENST00000394320 GSE1Q14687 1217 aa17.38■□□□□ 0.37
PPARGC1B-203ENST00000394320 RRS1Q15050 365 aaKnown RBP17.38■□□□□ 0.37
PPARGC1B-203ENST00000394320 DUOX2Q9NRD8 1548 aa17.38■□□□□ 0.37
PPARGC1B-203ENST00000394320 PDCP20941 246 aa17.38■□□□□ 0.37
PPARGC1B-203ENST00000394320 CREBRFQ8IUR6 639 aa17.38■□□□□ 0.37
PPARGC1B-203ENST00000394320 BRMS1Q9HCU9 246 aa17.38■□□□□ 0.37
PPARGC1B-203ENST00000394320 ADGRF5Q8IZF2 1346 aa17.38■□□□□ 0.37
PPARGC1B-203ENST00000394320 LRRCC1Q9C099 1032 aa17.38■□□□□ 0.37
PPARGC1B-203ENST00000394320 UGGT2Q9NYU1 1516 aa17.38■□□□□ 0.37
PPARGC1B-203ENST00000394320 SLFN5Q08AF3 891 aa17.38■□□□□ 0.37
PPARGC1B-203ENST00000394320 SLC3A2P08195 630 aaKnown RBP17.37■□□□□ 0.37
PPARGC1B-203ENST00000394320 CCDC73Q6ZRK6 1079 aa17.37■□□□□ 0.37
PPARGC1B-203ENST00000394320 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.37■□□□□ 0.37
PPARGC1B-203ENST00000394320 FBXW7Q969H0 707 aa17.37■□□□□ 0.37
PPARGC1B-203ENST00000394320 PHF8Q9UPP1 1060 aa17.37■□□□□ 0.37
PPARGC1B-203ENST00000394320 NOC3LQ8WTT2 800 aaKnown RBP17.37■□□□□ 0.37
PPARGC1B-203ENST00000394320 AMOTL2Q9Y2J4 779 aa17.36■□□□□ 0.37
PPARGC1B-203ENST00000394320 BTBD11A6QL63 1104 aa17.36■□□□□ 0.37
PPARGC1B-203ENST00000394320 BCAR3O75815 825 aa17.36■□□□□ 0.37
PPARGC1B-203ENST00000394320 WAPLQ7Z5K2 1190 aa17.36■□□□□ 0.37
PPARGC1B-203ENST00000394320 IFT57Q9NWB7 429 aa17.36■□□□□ 0.37
PPARGC1B-203ENST00000394320 LRPPRCP42704 1394 aaKnown RBP17.36■□□□□ 0.37
PPARGC1B-203ENST00000394320 NOS1P29475 1434 aa17.36■□□□□ 0.37
PPARGC1B-203ENST00000394320 CCDC27Q2M243 656 aa17.36■□□□□ 0.37
PPARGC1B-203ENST00000394320 DDX54Q8TDD1 881 aaKnown RBP17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms