RNA–Protein interactions for RNA: ENST00000394315.3

MRRF-208, Transcript of mitochondrial ribosome recycling factor, humanhuman

TSL 1 (best) BASIC

Gene MRRF, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRRF-208ENST00000394315 CRIPAKQ8N1N5 446 aa9.56□□□□□ -0.88
MRRF-208ENST00000394315 POLR3EQ9NVU0 708 aa9.56□□□□□ -0.88
MRRF-208ENST00000394315 LILRB3O75022 631 aa9.55□□□□□ -0.88
MRRF-208ENST00000394315 CLK2P49760 499 aaKnown RBP9.55□□□□□ -0.88
MRRF-208ENST00000394315 SH3BP2P78314 561 aa9.55□□□□□ -0.88
MRRF-208ENST00000394315 CTC1Q2NKJ3 1217 aa9.55□□□□□ -0.88
MRRF-208ENST00000394315 EHBP1Q8NDI1 1231 aa9.55□□□□□ -0.88
MRRF-208ENST00000394315 J3QL48 77 aa9.54□□□□□ -0.88
MRRF-208ENST00000394315 AXIN1O15169 862 aa9.54□□□□□ -0.88
MRRF-208ENST00000394315 BAP1Q92560 729 aa9.54□□□□□ -0.88
MRRF-208ENST00000394315 TSC1Q92574 1164 aa9.53□□□□□ -0.88
MRRF-208ENST00000394315 SMCPP49901 116 aaPredicted RBP9.52□□□□□ -0.88
MRRF-208ENST00000394315 TMEM132AQ24JP5 1023 aa9.52□□□□□ -0.88
MRRF-208ENST00000394315 SIAH2O43255 324 aa9.51□□□□□ -0.89
MRRF-208ENST00000394315 ALDH1A1P00352 501 aa9.51□□□□□ -0.89
MRRF-208ENST00000394315 POTECB2RU33 542 aa9.51□□□□□ -0.89
MRRF-208ENST00000394315 LINC01559Q495D7 138 aa9.51□□□□□ -0.89
MRRF-208ENST00000394315 RTL5Q5HYW3 569 aaPredicted RBP9.51□□□□□ -0.89
MRRF-208ENST00000394315 ZNF511Q8NB15 262 aa9.51□□□□□ -0.89
MRRF-208ENST00000394315 PER1O15534 1290 aaPredicted RBP9.5□□□□□ -0.89
MRRF-208ENST00000394315 SKIV2LQ15477 1246 aaKnown RBP9.5□□□□□ -0.89
MRRF-208ENST00000394315 HELBQ8NG08 1087 aaPredicted RBP9.5□□□□□ -0.89
MRRF-208ENST00000394315 F12P00748 615 aaPredicted RBP9.49□□□□□ -0.89
MRRF-208ENST00000394315 MAP10Q9P2G4 905 aa9.49□□□□□ -0.89
MRRF-208ENST00000394315 DACH1Q9UI36 760 aa9.49□□□□□ -0.89
MRRF-208ENST00000394315 VARSP26640 1264 aaKnown RBP9.48□□□□□ -0.89
MRRF-208ENST00000394315 HPS1Q92902 700 aa9.48□□□□□ -0.89
MRRF-208ENST00000394315 SH3D19Q5HYK7 790 aa9.47□□□□□ -0.89
MRRF-208ENST00000394315 ATP1B4Q9UN42 357 aaPredicted RBP9.47□□□□□ -0.89
MRRF-208ENST00000394315 WASF2Q9Y6W5 498 aa9.46□□□□□ -0.89
MRRF-208ENST00000394315 MPNDQ8N594 471 aa9.44□□□□□ -0.9
MRRF-208ENST00000394315 PROCA1Q8NCQ7 364 aaPredicted RBP9.44□□□□□ -0.9
MRRF-208ENST00000394315 ARMC2Q8NEN0 867 aa9.44□□□□□ -0.9
MRRF-208ENST00000394315 PCMTD1Q96MG8 357 aaPredicted RBP9.44□□□□□ -0.9
MRRF-208ENST00000394315 GOPCQ9HD26 462 aa9.44□□□□□ -0.9
MRRF-208ENST00000394315 CTDSPL2Q05D32 466 aa9.43□□□□□ -0.9
MRRF-208ENST00000394315 ZNF775Q96BV0 537 aaPredicted RBP9.43□□□□□ -0.9
MRRF-208ENST00000394315 GMPR2Q9P2T1 348 aaKnown RBP9.43□□□□□ -0.9
MRRF-208ENST00000394315 AGERQ15109 404 aa9.42□□□□□ -0.9
MRRF-208ENST00000394315 FAM174AQ8TBP5 190 aa9.42□□□□□ -0.9
MRRF-208ENST00000394315 FOXJ1Q92949 421 aa9.42□□□□□ -0.9
MRRF-208ENST00000394315 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.42□□□□□ -0.9
MRRF-208ENST00000394315 C11orf95C9JLR9 678 aaPredicted RBP9.41□□□□□ -0.9
MRRF-208ENST00000394315 BPHLQ86WA6 291 aaPredicted RBP9.41□□□□□ -0.9
MRRF-208ENST00000394315 ATP13A2Q9NQ11 1180 aa9.41□□□□□ -0.9
MRRF-208ENST00000394315 PPP2R2DQ66LE6 453 aa9.41□□□□□ -0.9
MRRF-208ENST00000394315 TLL2Q9Y6L7 1015 aa9.41□□□□□ -0.9
MRRF-208ENST00000394315 NBPF14Q5TI25 921 aa9.39□□□□□ -0.91
MRRF-208ENST00000394315 CAPN5O15484 640 aaPredicted RBP9.38□□□□□ -0.91
MRRF-208ENST00000394315 FBXO31Q5XUX0 539 aaPredicted RBP9.38□□□□□ -0.91
MRRF-208ENST00000394315 SENP2Q9HC62 589 aa9.38□□□□□ -0.91
MRRF-208ENST00000394315 ARID5BQ14865 1188 aa9.37□□□□□ -0.91
MRRF-208ENST00000394315 CDK15Q96Q40 435 aa9.37□□□□□ -0.91
MRRF-208ENST00000394315 NNTQ13423 1086 aa9.36□□□□□ -0.91
MRRF-208ENST00000394315 C4orf48Q5BLP8 95 aa9.36□□□□□ -0.91
MRRF-208ENST00000394315 LRRN4Q8WUT4 740 aa9.36□□□□□ -0.91
MRRF-208ENST00000394315 ADH1CP00326 375 aa9.36□□□□□ -0.91
MRRF-208ENST00000394315 GPKOWQ92917 476 aaPredicted RBP eCLIP9.36□□□□□ -0.91
MRRF-208ENST00000394315 AP1G2O75843 785 aa9.35□□□□□ -0.91
MRRF-208ENST00000394315 SH3RF1Q7Z6J0 888 aa9.35□□□□□ -0.91
MRRF-208ENST00000394315 KIFC2Q96AC6 838 aa9.34□□□□□ -0.91
MRRF-208ENST00000394315 TRIM47Q96LD4 638 aa9.34□□□□□ -0.91
MRRF-208ENST00000394315 NR5A1Q13285 461 aa9.33□□□□□ -0.92
MRRF-208ENST00000394315 SH3BP5LQ7L8J4 393 aa9.33□□□□□ -0.92
MRRF-208ENST00000394315 MAGEB6P1A0A0J9YX57 407 aa9.32□□□□□ -0.92
MRRF-208ENST00000394315 SNRPBP14678 240 aaKnown RBP9.32□□□□□ -0.92
MRRF-208ENST00000394315 GRM5P41594 1212 aa9.32□□□□□ -0.92
MRRF-208ENST00000394315 NR6A1Q15406 480 aa9.32□□□□□ -0.92
MRRF-208ENST00000394315 FKBPLQ9UIM3 349 aa9.32□□□□□ -0.92
MRRF-208ENST00000394315 PDXDC2PQ6P474 469 aa9.31□□□□□ -0.92
MRRF-208ENST00000394315 C1QTNF2Q9BXJ5 285 aa9.31□□□□□ -0.92
MRRF-208ENST00000394315 RFC5P40937 340 aa9.31□□□□□ -0.92
MRRF-208ENST00000394315 WDR4P57081 412 aaKnown RBP9.31□□□□□ -0.92
MRRF-208ENST00000394315 BMP1P13497 986 aa9.3□□□□□ -0.92
MRRF-208ENST00000394315 TRMT44Q8IYL2 757 aaKnown RBP9.3□□□□□ -0.92
MRRF-208ENST00000394315 KLF16Q9BXK1 252 aaPredicted RBP9.3□□□□□ -0.92
MRRF-208ENST00000394315 TIMP2P16035 220 aa9.29□□□□□ -0.92
MRRF-208ENST00000394315 TRIM46Q7Z4K8 759 aa9.29□□□□□ -0.92
MRRF-208ENST00000394315 CARD14Q9BXL6 1004 aa9.29□□□□□ -0.92
MRRF-208ENST00000394315 ZC3H4Q9UPT8 1303 aaKnown RBP9.28□□□□□ -0.92
MRRF-208ENST00000394315 TMEM259Q4ZIN3 620 aa9.28□□□□□ -0.92
MRRF-208ENST00000394315 TREML4Q6UXN2 200 aa9.28□□□□□ -0.92
MRRF-208ENST00000394315 VASH1Q7L8A9 365 aaPredicted RBP9.28□□□□□ -0.92
MRRF-208ENST00000394315 ARHGAP9Q9BRR9 750 aa9.28□□□□□ -0.92
MRRF-208ENST00000394315 MAP4K5Q9Y4K4 846 aa9.28□□□□□ -0.92
MRRF-208ENST00000394315 CCDC180Q9P1Z9 1646 aa9.28□□□□□ -0.92
MRRF-208ENST00000394315 NR3C2P08235 984 aa9.27□□□□□ -0.93
MRRF-208ENST00000394315 USP17L8P0C7I0 530 aa9.27□□□□□ -0.93
MRRF-208ENST00000394315 ERFEQ4G0M1 354 aa9.27□□□□□ -0.93
MRRF-208ENST00000394315 PNMA1Q8ND90 353 aa9.27□□□□□ -0.93
MRRF-208ENST00000394315 GTF3C3Q9Y5Q9 886 aa9.27□□□□□ -0.93
MRRF-208ENST00000394315 PTK2Q05397 1052 aa9.26□□□□□ -0.93
MRRF-208ENST00000394315 ZBTB33Q86T24 672 aa9.26□□□□□ -0.93
MRRF-208ENST00000394315 ZIC2O95409 532 aaPredicted RBP9.26□□□□□ -0.93
MRRF-208ENST00000394315 SCARF1Q14162 830 aa9.26□□□□□ -0.93
MRRF-208ENST00000394315 ITPKCQ96DU7 683 aa9.26□□□□□ -0.93
MRRF-208ENST00000394315 ZFP42Q96MM3 310 aa9.26□□□□□ -0.93
MRRF-208ENST00000394315 GPSM3Q9Y4H4 160 aa9.26□□□□□ -0.93
MRRF-208ENST00000394315 FSHRP23945 695 aa9.25□□□□□ -0.93
MRRF-208ENST00000394315 MRPL14Q6P1L8 145 aaKnown RBP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms