RNA–Protein interactions for RNA: ENST00000394104.6

GAPVD1-206, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2 BASIC

Gene GAPVD1, Length 6,737 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-206ENST00000394104 PPP1R1BQ9UD71 204 aaPredicted RBP6.77□□□□□ -1.33
GAPVD1-206ENST00000394104 CDC45O75419 566 aa6.77□□□□□ -1.33
GAPVD1-206ENST00000394104 HSP90AB4PQ58FF6 505 aa6.77□□□□□ -1.33
GAPVD1-206ENST00000394104 SOGA1O94964 1423 aa6.77□□□□□ -1.33
GAPVD1-206ENST00000394104 MAP4K4O95819 1239 aaPredicted RBP6.77□□□□□ -1.33
GAPVD1-206ENST00000394104 UBTFL1P0CB47 393 aaPredicted RBP6.77□□□□□ -1.33
GAPVD1-206ENST00000394104 PANK1Q8TE04 598 aa6.77□□□□□ -1.33
GAPVD1-206ENST00000394104 NEBLO76041 1014 aa6.77□□□□□ -1.33
GAPVD1-206ENST00000394104 TBC1D2BQ9UPU7 963 aa6.77□□□□□ -1.33
GAPVD1-206ENST00000394104 TRAK2O60296 914 aa6.76□□□□□ -1.33
GAPVD1-206ENST00000394104 MRE11P49959 708 aa6.76□□□□□ -1.33
GAPVD1-206ENST00000394104 PPFIBP1Q86W92 1011 aa6.76□□□□□ -1.33
GAPVD1-206ENST00000394104 GOLGA6L7A0A1B0GV03 622 aa6.76□□□□□ -1.33
GAPVD1-206ENST00000394104 ERICH4A6NGS2 130 aa6.76□□□□□ -1.33
GAPVD1-206ENST00000394104 SLC3A2P08195 630 aaKnown RBP6.76□□□□□ -1.33
GAPVD1-206ENST00000394104 ZNF396Q96N95 335 aaPredicted RBP6.76□□□□□ -1.33
GAPVD1-206ENST00000394104 PPM1FP49593 454 aaPredicted RBP6.76□□□□□ -1.33
GAPVD1-206ENST00000394104 KIF6Q6ZMV9 814 aa6.76□□□□□ -1.33
GAPVD1-206ENST00000394104 MTERF4Q7Z6M4 381 aaKnown RBP6.76□□□□□ -1.33
GAPVD1-206ENST00000394104 CCDC144AA2RUR9 1427 aa6.76□□□□□ -1.33
GAPVD1-206ENST00000394104 FIBPO43427 364 aa6.76□□□□□ -1.33
GAPVD1-206ENST00000394104 SSR1P43307 286 aaKnown RBP6.75□□□□□ -1.33
GAPVD1-206ENST00000394104 STK38Q15208 465 aa6.75□□□□□ -1.33
GAPVD1-206ENST00000394104 UACAQ9BZF9 1416 aa6.75□□□□□ -1.33
GAPVD1-206ENST00000394104 EZRP15311 586 aaKnown RBP6.75□□□□□ -1.33
GAPVD1-206ENST00000394104 RUNDC1Q96C34 613 aa6.75□□□□□ -1.33
GAPVD1-206ENST00000394104 TAF3Q5VWG9 929 aa6.75□□□□□ -1.33
GAPVD1-206ENST00000394104 ZBED9Q6R2W3 1325 aa6.75□□□□□ -1.33
GAPVD1-206ENST00000394104 DCAF8L1A6NGE4 600 aa6.74□□□□□ -1.33
GAPVD1-206ENST00000394104 C1orf115Q9H7X2 142 aa6.74□□□□□ -1.33
GAPVD1-206ENST00000394104 LRRFIP2Q9Y608 721 aaKnown RBP6.74□□□□□ -1.33
GAPVD1-206ENST00000394104 DYDC1Q8WWB3 177 aa6.74□□□□□ -1.33
GAPVD1-206ENST00000394104 RAPGEF4Q8WZA2 1011 aa6.74□□□□□ -1.33
GAPVD1-206ENST00000394104 KIF7Q2M1P5 1343 aa6.74□□□□□ -1.33
GAPVD1-206ENST00000394104 FANCIQ9NVI1 1328 aa6.74□□□□□ -1.33
GAPVD1-206ENST00000394104 ABCC8Q09428 1581 aa6.74□□□□□ -1.33
GAPVD1-206ENST00000394104 CCDC69A6NI79 296 aa6.74□□□□□ -1.33
GAPVD1-206ENST00000394104 RABEP1Q15276 862 aa6.74□□□□□ -1.33
GAPVD1-206ENST00000394104 CCDC112Q8NEF3 446 aa6.74□□□□□ -1.33
GAPVD1-206ENST00000394104 CNNM1Q9NRU3 951 aa6.74□□□□□ -1.33
GAPVD1-206ENST00000394104 RBM5P52756 815 aaKnown RBP eCLIP6.74□□□□□ -1.33
GAPVD1-206ENST00000394104 PKNOX2Q96KN3 472 aa6.74□□□□□ -1.33
GAPVD1-206ENST00000394104 TNMDQ9H2S6 317 aa6.74□□□□□ -1.33
GAPVD1-206ENST00000394104 INCENPQ9NQS7 918 aa6.74□□□□□ -1.33
GAPVD1-206ENST00000394104 UQCRHLA0A096LP55 91 aa6.74□□□□□ -1.33
GAPVD1-206ENST00000394104 GOLGA6L10A0A0M3HER8 536 aa6.74□□□□□ -1.33
GAPVD1-206ENST00000394104 MPHOSPH10O00566 681 aaKnown RBP6.74□□□□□ -1.33
GAPVD1-206ENST00000394104 UQCRHP07919 91 aa6.74□□□□□ -1.33
GAPVD1-206ENST00000394104 NUP133Q8WUM0 1156 aa6.74□□□□□ -1.33
GAPVD1-206ENST00000394104 LRRCC1Q9C099 1032 aa6.74□□□□□ -1.33
GAPVD1-206ENST00000394104 VPS8Q8N3P4 1428 aa6.73□□□□□ -1.33
GAPVD1-206ENST00000394104 NEK4P51957 841 aa6.73□□□□□ -1.33
GAPVD1-206ENST00000394104 STIM1Q13586 685 aa6.73□□□□□ -1.33
GAPVD1-206ENST00000394104 PIBF1Q8WXW3 757 aa6.73□□□□□ -1.33
GAPVD1-206ENST00000394104 BRPF3Q9ULD4 1205 aa6.73□□□□□ -1.33
GAPVD1-206ENST00000394104 NF2P35240 595 aa6.73□□□□□ -1.33
GAPVD1-206ENST00000394104 CCDC102AQ96A19 550 aa6.73□□□□□ -1.33
GAPVD1-206ENST00000394104 RBM42Q9BTD8 480 aaKnown RBP6.73□□□□□ -1.33
GAPVD1-206ENST00000394104 GNAI1P63096 354 aa6.73□□□□□ -1.33
GAPVD1-206ENST00000394104 GIMAP7Q8NHV1 300 aa6.73□□□□□ -1.33
GAPVD1-206ENST00000394104 PIP4K2AP48426 406 aaPredicted RBP6.73□□□□□ -1.33
GAPVD1-206ENST00000394104 TICAM2Q86XR7 235 aa6.73□□□□□ -1.33
GAPVD1-206ENST00000394104 LUC7LQ9NQ29 371 aaKnown RBP6.73□□□□□ -1.33
GAPVD1-206ENST00000394104 DACH1Q9UI36 760 aa6.73□□□□□ -1.33
GAPVD1-206ENST00000394104 USP47Q96K76 1375 aa6.73□□□□□ -1.33
GAPVD1-206ENST00000394104 SURF6O75683 361 aaKnown RBP6.73□□□□□ -1.33
GAPVD1-206ENST00000394104 EIF3JO75822 258 aaKnown RBP6.73□□□□□ -1.33
GAPVD1-206ENST00000394104 NLRP2Q9NX02 1062 aa6.73□□□□□ -1.33
GAPVD1-206ENST00000394104 SSBP05455 408 aaKnown RBP eCLIP6.72□□□□□ -1.33
GAPVD1-206ENST00000394104 ME1P48163 572 aa6.72□□□□□ -1.33
GAPVD1-206ENST00000394104 HMGN5P82970 282 aaKnown RBP6.72□□□□□ -1.33
GAPVD1-206ENST00000394104 KIAA1328Q86T90 577 aa6.72□□□□□ -1.33
GAPVD1-206ENST00000394104 CCDC113Q9H0I3 377 aa6.72□□□□□ -1.33
GAPVD1-206ENST00000394104 SIL1Q9H173 461 aa6.72□□□□□ -1.33
GAPVD1-206ENST00000394104 VGFO15240 615 aaPredicted RBP6.72□□□□□ -1.33
GAPVD1-206ENST00000394104 MAP2K1Q02750 393 aaPredicted RBP6.72□□□□□ -1.33
GAPVD1-206ENST00000394104 CCDC158Q5M9N0 1113 aa6.72□□□□□ -1.33
GAPVD1-206ENST00000394104 ERLIN1O75477 346 aa6.72□□□□□ -1.33
GAPVD1-206ENST00000394104 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.72□□□□□ -1.33
GAPVD1-206ENST00000394104 ATF3P18847 181 aa6.72□□□□□ -1.33
GAPVD1-206ENST00000394104 CCDC91Q7Z6B0 441 aa6.72□□□□□ -1.33
GAPVD1-206ENST00000394104 SPINK5Q9NQ38 1064 aaPredicted RBP6.72□□□□□ -1.33
GAPVD1-206ENST00000394104 CCDC192P0DO97 292 aa6.71□□□□□ -1.33
GAPVD1-206ENST00000394104 CFAP45Q9UL16 551 aa6.71□□□□□ -1.33
GAPVD1-206ENST00000394104 CCDC18Q5T9S5 1454 aa6.71□□□□□ -1.33
GAPVD1-206ENST00000394104 SOGA3Q5TF21 947 aa6.71□□□□□ -1.34
GAPVD1-206ENST00000394104 JAKMIP3Q5VZ66 844 aa6.71□□□□□ -1.34
GAPVD1-206ENST00000394104 HIP1O00291 1037 aa6.71□□□□□ -1.34
GAPVD1-206ENST00000394104 CBFA2T2O43439 604 aa6.71□□□□□ -1.34
GAPVD1-206ENST00000394104 TXLNBQ8N3L3 684 aa6.71□□□□□ -1.34
GAPVD1-206ENST00000394104 CEP63Q96MT8 703 aa6.71□□□□□ -1.34
GAPVD1-206ENST00000394104 PRKRIP1Q9H875 184 aaPredicted RBP6.71□□□□□ -1.34
GAPVD1-206ENST00000394104 GOPCQ9HD26 462 aa6.71□□□□□ -1.34
GAPVD1-206ENST00000394104 ZNF76P36508 570 aa6.71□□□□□ -1.34
GAPVD1-206ENST00000394104 CHMP4BP1P59074 171 aa6.71□□□□□ -1.34
GAPVD1-206ENST00000394104 SLC26A8Q96RN1 970 aa6.71□□□□□ -1.34
GAPVD1-206ENST00000394104 MBD3O95983 291 aa6.71□□□□□ -1.34
GAPVD1-206ENST00000394104 DESP17661 470 aa6.71□□□□□ -1.34
GAPVD1-206ENST00000394104 CCDC30Q5VVM6 783 aa6.71□□□□□ -1.34
GAPVD1-206ENST00000394104 IQCEQ6IPM2 695 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms