RNA–Protein interactions for RNA: ENST00000393988.2

KRT41P-201, Transcript of keratin 41 pseudogene, humanhuman

BASIC

Gene KRT41P, Length 1,293 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT41P-201ENST00000393988 ATP7BP35670 1465 aa17.31■□□□□ 0.36
KRT41P-201ENST00000393988 FAM98CQ17RN3 349 aaKnown RBP17.3■□□□□ 0.36
KRT41P-201ENST00000393988 PRDM11Q9NQV5 511 aa17.3■□□□□ 0.36
KRT41P-201ENST00000393988 ZRANB1Q9UGI0 708 aa17.3■□□□□ 0.36
KRT41P-201ENST00000393988 ITSN1Q15811 1721 aa17.3■□□□□ 0.36
KRT41P-201ENST00000393988 ACEP12821 1306 aa17.29■□□□□ 0.36
KRT41P-201ENST00000393988 SRPK2P78362 688 aaKnown RBP17.29■□□□□ 0.36
KRT41P-201ENST00000393988 NEUROD1Q13562 356 aa17.29■□□□□ 0.36
KRT41P-201ENST00000393988 KRT27Q7Z3Y8 459 aa17.29■□□□□ 0.36
KRT41P-201ENST00000393988 SIN3AQ96ST3 1273 aa17.29■□□□□ 0.36
KRT41P-201ENST00000393988 KIAA1210Q9ULL0 1709 aa17.28■□□□□ 0.36
KRT41P-201ENST00000393988 ZC3H6P61129 1189 aaKnown RBP17.28■□□□□ 0.36
KRT41P-201ENST00000393988 SF3B2Q13435 895 aaKnown RBP17.28■□□□□ 0.36
KRT41P-201ENST00000393988 CHRNA2Q15822 529 aa17.28■□□□□ 0.36
KRT41P-201ENST00000393988 NBPF8Q3BBV2 869 aa17.28■□□□□ 0.36
KRT41P-201ENST00000393988 L3MBTL2Q969R5 705 aa17.28■□□□□ 0.36
KRT41P-201ENST00000393988 CCDC61Q9Y6R9 512 aa17.28■□□□□ 0.36
KRT41P-201ENST00000393988 COL14A1Q05707 1796 aaKnown RBP17.28■□□□□ 0.36
KRT41P-201ENST00000393988 ONECUT3O60422 494 aaPredicted RBP17.27■□□□□ 0.36
KRT41P-201ENST00000393988 DEFB132Q7Z7B7 95 aa17.27■□□□□ 0.36
KRT41P-201ENST00000393988 CABP2Q9NPB3 220 aa17.27■□□□□ 0.36
KRT41P-201ENST00000393988 EP400Q96L91 3159 aa17.26■□□□□ 0.35
KRT41P-201ENST00000393988 CENPJQ9HC77 1338 aaPredicted RBP17.26■□□□□ 0.35
KRT41P-201ENST00000393988 STRN4Q9NRL3 753 aa17.26■□□□□ 0.35
KRT41P-201ENST00000393988 BLMP54132 1417 aaPredicted RBP17.26■□□□□ 0.35
KRT41P-201ENST00000393988 NRAPQ86VF7 1730 aa17.25■□□□□ 0.35
KRT41P-201ENST00000393988 FAM182BQ5T319 152 aa17.25■□□□□ 0.35
KRT41P-201ENST00000393988 ABTB2Q8N961 1025 aa17.25■□□□□ 0.35
KRT41P-201ENST00000393988 KIAA0232Q92628 1395 aa17.25■□□□□ 0.35
KRT41P-201ENST00000393988 PLEKHG3A1L390 1219 aa17.24■□□□□ 0.35
KRT41P-201ENST00000393988 SPATA31A5Q5VU36 1347 aa17.23■□□□□ 0.35
KRT41P-201ENST00000393988 SPATA31A7Q8IWB4 1347 aa17.23■□□□□ 0.35
KRT41P-201ENST00000393988 CRYBG1Q9Y4K1 1723 aa17.23■□□□□ 0.35
KRT41P-201ENST00000393988 POLR3AO14802 1390 aaPredicted RBP17.23■□□□□ 0.35
KRT41P-201ENST00000393988 EVA1CP58658 441 aa17.22■□□□□ 0.35
KRT41P-201ENST00000393988 USP35Q9P2H5 1018 aa17.22■□□□□ 0.35
KRT41P-201ENST00000393988 TOPAZ1Q8N9V7 1692 aa17.22■□□□□ 0.35
KRT41P-201ENST00000393988 PPIP5K1Q6PFW1 1433 aa17.21■□□□□ 0.35
KRT41P-201ENST00000393988 ZBTB7CA1YPR0 619 aa17.2■□□□□ 0.34
KRT41P-201ENST00000393988 CABP1Q9NZU7 370 aa17.2■□□□□ 0.34
KRT41P-201ENST00000393988 PHRF1Q9P1Y6 1649 aaKnown RBP17.2■□□□□ 0.34
KRT41P-201ENST00000393988 QRICH2Q9H0J4 1663 aa17.2■□□□□ 0.34
KRT41P-201ENST00000393988 SPATA31A1Q5TZJ5 1347 aa17.18■□□□□ 0.34
KRT41P-201ENST00000393988 NLRP13Q86W25 1043 aa17.17■□□□□ 0.34
KRT41P-201ENST00000393988 ROCK2O75116 1388 aaKnown RBP17.16■□□□□ 0.34
KRT41P-201ENST00000393988 BAG6P46379 1132 aa17.16■□□□□ 0.34
KRT41P-201ENST00000393988 EVC2Q86UK5 1308 aa17.16■□□□□ 0.34
KRT41P-201ENST00000393988 GCP02774 474 aa17.15■□□□□ 0.34
KRT41P-201ENST00000393988 NLRP6P59044 892 aa17.15■□□□□ 0.34
KRT41P-201ENST00000393988 LARP1Q6PKG0 1096 aaKnown RBP17.15■□□□□ 0.34
KRT41P-201ENST00000393988 TRPM1Q7Z4N2 1603 aa17.14■□□□□ 0.33
KRT41P-201ENST00000393988 EN1Q05925 392 aaPredicted RBP17.13■□□□□ 0.33
KRT41P-201ENST00000393988 NRKQ7Z2Y5 1582 aa17.13■□□□□ 0.33
KRT41P-201ENST00000393988 USP19O94966 1318 aa17.13■□□□□ 0.33
KRT41P-201ENST00000393988 SSH2Q76I76 1423 aa17.13■□□□□ 0.33
KRT41P-201ENST00000393988 PSDA5PKW4 1024 aaPredicted RBP17.12■□□□□ 0.33
KRT41P-201ENST00000393988 CAMTA1Q9Y6Y1 1673 aa17.12■□□□□ 0.33
KRT41P-201ENST00000393988 THSD7AQ9UPZ6 1657 aa17.11■□□□□ 0.33
KRT41P-201ENST00000393988 PDE3BQ13370 1112 aa17.11■□□□□ 0.33
KRT41P-201ENST00000393988 USP6P35125 1406 aa17.11■□□□□ 0.33
KRT41P-201ENST00000393988 SOX12O15370 315 aa17.1■□□□□ 0.33
KRT41P-201ENST00000393988 TRIM37O94972 964 aa17.1■□□□□ 0.33
KRT41P-201ENST00000393988 CPDO75976 1380 aa17.1■□□□□ 0.33
KRT41P-201ENST00000393988 FAM196AQ6ZSG2 479 aa17.09■□□□□ 0.33
KRT41P-201ENST00000393988 TCP11L2Q8N4U5 519 aa17.09■□□□□ 0.33
KRT41P-201ENST00000393988 RGPD1P0DJD0 1748 aa17.08■□□□□ 0.32
KRT41P-201ENST00000393988 BARGINQ6ZT62 677 aa17.08■□□□□ 0.32
KRT41P-201ENST00000393988 SRCAPQ6ZRS2 3230 aa17.07■□□□□ 0.32
KRT41P-201ENST00000393988 BRD4O60885 1362 aaPredicted RBP17.07■□□□□ 0.32
KRT41P-201ENST00000393988 LMO7Q8WWI1 1683 aa17.07■□□□□ 0.32
KRT41P-201ENST00000393988 APBA3O96018 575 aa17.06■□□□□ 0.32
KRT41P-201ENST00000393988 EZH2Q15910 746 aaKnown RBP17.06■□□□□ 0.32
KRT41P-201ENST00000393988 CARD11Q9BXL7 1154 aa17.06■□□□□ 0.32
KRT41P-201ENST00000393988 TTC21BQ7Z4L5 1316 aa17.05■□□□□ 0.32
KRT41P-201ENST00000393988 ZNF692Q9BU19 519 aaPredicted RBP17.05■□□□□ 0.32
KRT41P-201ENST00000393988 R3HDM1Q15032 1099 aaKnown RBP17.04■□□□□ 0.32
KRT41P-201ENST00000393988 TOM1L2Q6ZVM7 507 aa17.04■□□□□ 0.32
KRT41P-201ENST00000393988 COL5A2P05997 1499 aaPredicted RBP17.04■□□□□ 0.32
KRT41P-201ENST00000393988 PIK3C2AO00443 1686 aa17.04■□□□□ 0.32
KRT41P-201ENST00000393988 TONSLQ96HA7 1378 aa17.03■□□□□ 0.32
KRT41P-201ENST00000393988 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.03■□□□□ 0.32
KRT41P-201ENST00000393988 TMC1Q8TDI8 760 aa17.03■□□□□ 0.32
KRT41P-201ENST00000393988 THRAP3Q9Y2W1 955 aaKnown RBP17.03■□□□□ 0.32
KRT41P-201ENST00000393988 KTN1Q86UP2 1357 aaKnown RBP17.02■□□□□ 0.32
KRT41P-201ENST00000393988 TNS1Q9HBL0 1735 aaKnown RBP17.02■□□□□ 0.32
KRT41P-201ENST00000393988 AXIN2Q9Y2T1 843 aa17.02■□□□□ 0.32
KRT41P-201ENST00000393988 CRB1P82279 1406 aa17.02■□□□□ 0.31
KRT41P-201ENST00000393988 AATKQ6ZMQ8 1374 aa17.02■□□□□ 0.31
KRT41P-201ENST00000393988 SLIT3O75094 1523 aa17.01■□□□□ 0.31
KRT41P-201ENST00000393988 CSB-PGBD3P0DP91 1061 aa17.01■□□□□ 0.31
KRT41P-201ENST00000393988 CAMKK2Q96RR4 588 aa17.01■□□□□ 0.31
KRT41P-201ENST00000393988 AKAP12Q02952 1782 aa17■□□□□ 0.31
KRT41P-201ENST00000393988 KCNH5Q8NCM2 988 aa17■□□□□ 0.31
KRT41P-201ENST00000393988 TTC21AQ8NDW8 1320 aa16.99■□□□□ 0.31
KRT41P-201ENST00000393988 ARHGEF25Q86VW2 580 aa16.99■□□□□ 0.31
KRT41P-201ENST00000393988 DISP2A7MBM2 1401 aa16.98■□□□□ 0.31
KRT41P-201ENST00000393988 RGPD5Q99666 1765 aa16.97■□□□□ 0.31
KRT41P-201ENST00000393988 CPSF1Q10570 1443 aaKnown RBP16.97■□□□□ 0.31
KRT41P-201ENST00000393988 DDB1Q16531 1140 aa16.97■□□□□ 0.31
KRT41P-201ENST00000393988 SLC12A5Q9H2X9 1139 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms