RNA–Protein interactions for RNA: ENST00000393287.9

ATXN3-203, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 6,770 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-203ENST00000393287 SLAIN2Q9P270 581 aa10.12□□□□□ -0.79
ATXN3-203ENST00000393287 TSPYL4Q9UJ04 414 aa10.12□□□□□ -0.79
ATXN3-203ENST00000393287 A2ML1A8K2U0 1454 aa10.12□□□□□ -0.79
ATXN3-203ENST00000393287 GCC2Q8IWJ2 1684 aa10.11□□□□□ -0.79
ATXN3-203ENST00000393287 ABCC3O15438 1527 aa10.11□□□□□ -0.79
ATXN3-203ENST00000393287 PPP2R1AP30153 589 aa10.11□□□□□ -0.79
ATXN3-203ENST00000393287 ZRSR1Q15695 479 aaKnown RBP10.11□□□□□ -0.79
ATXN3-203ENST00000393287 CHMP3Q9Y3E7 222 aa10.11□□□□□ -0.79
ATXN3-203ENST00000393287 COL17A1Q9UMD9 1497 aaPredicted RBP10.11□□□□□ -0.79
ATXN3-203ENST00000393287 TTC21BQ7Z4L5 1316 aa10.11□□□□□ -0.79
ATXN3-203ENST00000393287 ADAMTS2O95450 1211 aa10.11□□□□□ -0.79
ATXN3-203ENST00000393287 MTHFSP49914 203 aa10.11□□□□□ -0.79
ATXN3-203ENST00000393287 DDX19BQ9UMR2 479 aa10.11□□□□□ -0.79
ATXN3-203ENST00000393287 TSPOAP1O95153 1857 aa10.11□□□□□ -0.79
ATXN3-203ENST00000393287 PTPRTO14522 1441 aa10.1□□□□□ -0.79
ATXN3-203ENST00000393287 PTMSP20962 102 aa10.1□□□□□ -0.79
ATXN3-203ENST00000393287 IRX6P78412 446 aaPredicted RBP10.1□□□□□ -0.79
ATXN3-203ENST00000393287 KIF6Q6ZMV9 814 aa10.1□□□□□ -0.79
ATXN3-203ENST00000393287 TMEM94Q12767 1356 aa10.1□□□□□ -0.79
ATXN3-203ENST00000393287 CCDC30Q5VVM6 783 aa10.1□□□□□ -0.79
ATXN3-203ENST00000393287 ANKRD36BQ8N2N9 1353 aa10.1□□□□□ -0.79
ATXN3-203ENST00000393287 AMOTQ4VCS5 1084 aa10.1□□□□□ -0.79
ATXN3-203ENST00000393287 SYTL4Q96C24 671 aaPredicted RBP10.1□□□□□ -0.79
ATXN3-203ENST00000393287 NSD3Q9BZ95 1437 aa10.1□□□□□ -0.79
ATXN3-203ENST00000393287 CDK11BP21127 795 aaKnown RBP10.09□□□□□ -0.79
ATXN3-203ENST00000393287 PLXNC1O60486 1568 aa10.09□□□□□ -0.79
ATXN3-203ENST00000393287 NOL10Q9BSC4 688 aaKnown RBP10.09□□□□□ -0.79
ATXN3-203ENST00000393287 AMOTL1Q8IY63 956 aa10.09□□□□□ -0.79
ATXN3-203ENST00000393287 FCHSD2O94868 740 aa10.08□□□□□ -0.8
ATXN3-203ENST00000393287 SLC4A10Q6U841 1118 aa10.08□□□□□ -0.8
ATXN3-203ENST00000393287 ZNF428Q96B54 188 aa10.08□□□□□ -0.8
ATXN3-203ENST00000393287 HSCBQ8IWL3 235 aa10.08□□□□□ -0.8
ATXN3-203ENST00000393287 ARHGEF40Q8TER5 1519 aa10.07□□□□□ -0.8
ATXN3-203ENST00000393287 MSH5O43196 834 aa10.07□□□□□ -0.8
ATXN3-203ENST00000393287 NME9Q86XW9 330 aa10.07□□□□□ -0.8
ATXN3-203ENST00000393287 TCERG1O14776 1098 aaKnown RBP10.07□□□□□ -0.8
ATXN3-203ENST00000393287 WDR63Q8IWG1 891 aa10.07□□□□□ -0.8
ATXN3-203ENST00000393287 PTPRMP28827 1452 aa10.07□□□□□ -0.8
ATXN3-203ENST00000393287 CABP4P57796 275 aa10.07□□□□□ -0.8
ATXN3-203ENST00000393287 C9orf78Q9NZ63 289 aaPredicted RBP10.07□□□□□ -0.8
ATXN3-203ENST00000393287 HTATSF1O43719 755 aaKnown RBP10.06□□□□□ -0.8
ATXN3-203ENST00000393287 PRDM15P57071 1507 aaPredicted RBP10.06□□□□□ -0.8
ATXN3-203ENST00000393287 SENP3-EIF4A1A0A087X0R7 540 aa10.06□□□□□ -0.8
ATXN3-203ENST00000393287 APAF1O14727 1248 aa10.06□□□□□ -0.8
ATXN3-203ENST00000393287 ZNF335Q9H4Z2 1342 aaPredicted RBP10.05□□□□□ -0.8
ATXN3-203ENST00000393287 RGS3P49796 1198 aa10.05□□□□□ -0.8
ATXN3-203ENST00000393287 DIP2CQ9Y2E4 1556 aa10.05□□□□□ -0.8
ATXN3-203ENST00000393287 RRP7AQ9Y3A4 280 aaKnown RBP10.04□□□□□ -0.8
ATXN3-203ENST00000393287 CENPQQ7L2Z9 268 aaPredicted RBP10.04□□□□□ -0.8
ATXN3-203ENST00000393287 KDM5CP41229 1560 aa10.04□□□□□ -0.8
ATXN3-203ENST00000393287 ZNF530Q6P9A1 599 aaPredicted RBP10.04□□□□□ -0.8
ATXN3-203ENST00000393287 ZFYVE9O95405 1425 aa10.04□□□□□ -0.8
ATXN3-203ENST00000393287 ZMYM4Q5VZL5 1548 aa10.04□□□□□ -0.8
ATXN3-203ENST00000393287 FRAT2O75474 233 aaPredicted RBP10.04□□□□□ -0.8
ATXN3-203ENST00000393287 HMOX1P09601 288 aa10.04□□□□□ -0.8
ATXN3-203ENST00000393287 RIC3Q7Z5B4 369 aa10.04□□□□□ -0.8
ATXN3-203ENST00000393287 PPIP5K1Q6PFW1 1433 aa10.04□□□□□ -0.8
ATXN3-203ENST00000393287 RUFY2Q8WXA3 655 aa10.03□□□□□ -0.8
ATXN3-203ENST00000393287 EIF2S2P20042 333 aaKnown RBP10.03□□□□□ -0.8
ATXN3-203ENST00000393287 SULT6B1Q6IMI4 303 aa10.03□□□□□ -0.8
ATXN3-203ENST00000393287 PLEKHG3A1L390 1219 aa10.03□□□□□ -0.8
ATXN3-203ENST00000393287 DZIP1LQ8IYY4 767 aaKnown RBP10.03□□□□□ -0.8
ATXN3-203ENST00000393287 KIF3AQ9Y496 699 aa10.03□□□□□ -0.8
ATXN3-203ENST00000393287 ARHGEF10O15013 1369 aa10.03□□□□□ -0.8
ATXN3-203ENST00000393287 SPATA31E1Q6ZUB1 1445 aa10.03□□□□□ -0.8
ATXN3-203ENST00000393287 PRKAR2BP31323 418 aa10.03□□□□□ -0.8
ATXN3-203ENST00000393287 RRS1Q15050 365 aaKnown RBP10.03□□□□□ -0.8
ATXN3-203ENST00000393287 LMTK2Q8IWU2 1503 aa10.03□□□□□ -0.8
ATXN3-203ENST00000393287 ORAI2Q96SN7 254 aa10.03□□□□□ -0.8
ATXN3-203ENST00000393287 GNAI3P08754 354 aa10.03□□□□□ -0.8
ATXN3-203ENST00000393287 EXOC5O00471 708 aa10.02□□□□□ -0.81
ATXN3-203ENST00000393287 G3BP1Q13283 466 aaKnown RBP eCLIP10.02□□□□□ -0.81
ATXN3-203ENST00000393287 FKBP5Q13451 457 aaPredicted RBP10.02□□□□□ -0.81
ATXN3-203ENST00000393287 ERC1Q8IUD2 1116 aa10.02□□□□□ -0.81
ATXN3-203ENST00000393287 DDX54Q8TDD1 881 aaKnown RBP10.02□□□□□ -0.81
ATXN3-203ENST00000393287 METP08581 1390 aa10.01□□□□□ -0.81
ATXN3-203ENST00000393287 GOLGA6L6A8MZA4 724 aa10.01□□□□□ -0.81
ATXN3-203ENST00000393287 RRP1P56182 461 aaKnown RBP10.01□□□□□ -0.81
ATXN3-203ENST00000393287 TEX13AQ9BXU3 409 aaPredicted RBP10.01□□□□□ -0.81
ATXN3-203ENST00000393287 GNAT3A8MTJ3 354 aa10.01□□□□□ -0.81
ATXN3-203ENST00000393287 CDC42BPAQ5VT25 1732 aa10.01□□□□□ -0.81
ATXN3-203ENST00000393287 ERC2O15083 957 aa10.01□□□□□ -0.81
ATXN3-203ENST00000393287 C8orf37Q96NL8 207 aa10.01□□□□□ -0.81
ATXN3-203ENST00000393287 MFAP1P55081 439 aaKnown RBP10□□□□□ -0.81
ATXN3-203ENST00000393287 CERKQ8TCT0 537 aa10□□□□□ -0.81
ATXN3-203ENST00000393287 CCDC34Q96HJ3 373 aa10□□□□□ -0.81
ATXN3-203ENST00000393287 TESK2Q96S53 571 aa10□□□□□ -0.81
ATXN3-203ENST00000393287 C11orf95C9JLR9 678 aaPredicted RBP10□□□□□ -0.81
ATXN3-203ENST00000393287 TRIM34Q9BYJ4 488 aa10□□□□□ -0.81
ATXN3-203ENST00000393287 CCT4P50991 539 aaKnown RBP10□□□□□ -0.81
ATXN3-203ENST00000393287 CDCA7Q9BWT1 371 aaPredicted RBP10□□□□□ -0.81
ATXN3-203ENST00000393287 MYOM2P54296 1465 aa9.99□□□□□ -0.81
ATXN3-203ENST00000393287 STARD3NLO95772 234 aa9.99□□□□□ -0.81
ATXN3-203ENST00000393287 GCP02774 474 aa9.99□□□□□ -0.81
ATXN3-203ENST00000393287 NFE2L2Q16236 605 aa9.99□□□□□ -0.81
ATXN3-203ENST00000393287 CSPP1Q1MSJ5 1256 aa9.99□□□□□ -0.81
ATXN3-203ENST00000393287 ZNF652Q9Y2D9 606 aa9.99□□□□□ -0.81
ATXN3-203ENST00000393287 SBNO2Q9Y2G9 1366 aa9.99□□□□□ -0.81
ATXN3-203ENST00000393287 KDM4FA0A1W2PPD8 638 aa9.99□□□□□ -0.81
ATXN3-203ENST00000393287 GNL2Q13823 731 aaKnown RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms