RNA–Protein interactions for RNA: ENST00000393150.7

CASP4-201, Transcript of caspase 4, humanhuman

TSL 1 (best) BASIC

Gene CASP4, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-201ENST00000393150 DAPK1P53355 1430 aa12.11□□□□□ -0.47
CASP4-201ENST00000393150 KANK4Q5T7N3 995 aaPredicted RBP12.11□□□□□ -0.47
CASP4-201ENST00000393150 VPS8Q8N3P4 1428 aa12.1□□□□□ -0.47
CASP4-201ENST00000393150 ZNF326Q5BKZ1 582 aaKnown RBP12.1□□□□□ -0.47
CASP4-201ENST00000393150 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.1□□□□□ -0.475e-8■■■■□ 20
CASP4-201ENST00000393150 TRPM2O94759 1503 aa12.09□□□□□ -0.47
CASP4-201ENST00000393150 ASXL1Q8IXJ9 1541 aa12.09□□□□□ -0.47
CASP4-201ENST00000393150 PNPLA6Q8IY17 1366 aa12.09□□□□□ -0.47
CASP4-201ENST00000393150 FNBP4Q8N3X1 1017 aaPredicted RBP12.08□□□□□ -0.48
CASP4-201ENST00000393150 DCBLD2Q96PD2 775 aa12.08□□□□□ -0.48
CASP4-201ENST00000393150 FAM50AQ14320 339 aaKnown RBP12.07□□□□□ -0.48
CASP4-201ENST00000393150 ADAMTS13Q76LX8 1427 aa12.06□□□□□ -0.48
CASP4-201ENST00000393150 IRX5P78411 483 aaPredicted RBP12.06□□□□□ -0.48
CASP4-201ENST00000393150 DPY19L2Q6NUT2 758 aa12.06□□□□□ -0.48
CASP4-201ENST00000393150 PDCD7Q8N8D1 485 aaKnown RBP12.06□□□□□ -0.48
CASP4-201ENST00000393150 DDX17Q92841 729 aaKnown RBP12.06□□□□□ -0.48
CASP4-201ENST00000393150 PTCH1Q13635 1447 aa12.05□□□□□ -0.48
CASP4-201ENST00000393150 ANKRD50Q9ULJ7 1429 aa12.05□□□□□ -0.48
CASP4-201ENST00000393150 PTPN23Q9H3S7 1636 aa12.05□□□□□ -0.48
CASP4-201ENST00000393150 MST1RQ04912 1400 aa12.05□□□□□ -0.48
CASP4-201ENST00000393150 GJD4Q96KN9 370 aaPredicted RBP12.04□□□□□ -0.48
CASP4-201ENST00000393150 PELP1Q8IZL8 1130 aaKnown RBP12.03□□□□□ -0.48
CASP4-201ENST00000393150 TMEM131LA2VDJ0 1609 aa12.03□□□□□ -0.48
CASP4-201ENST00000393150 CROCC2H7BZ55 1655 aa12.03□□□□□ -0.48
CASP4-201ENST00000393150 GCC2Q8IWJ2 1684 aa12.02□□□□□ -0.49
CASP4-201ENST00000393150 KCNV2Q8TDN2 545 aa12.02□□□□□ -0.49
CASP4-201ENST00000393150 CRISPLD2Q9H0B8 497 aa12.02□□□□□ -0.49
CASP4-201ENST00000393150 BLMP54132 1417 aaPredicted RBP12.01□□□□□ -0.49
CASP4-201ENST00000393150 ADGRL3Q9HAR2 1447 aa12.01□□□□□ -0.49
CASP4-201ENST00000393150 LRPPRCP42704 1394 aaKnown RBP12.01□□□□□ -0.49
CASP4-201ENST00000393150 SOS2Q07890 1332 aaPredicted RBP12.01□□□□□ -0.49
CASP4-201ENST00000393150 NPHP3Q7Z494 1330 aa12.01□□□□□ -0.49
CASP4-201ENST00000393150 IER5LQ5T953 404 aa12.01□□□□□ -0.49
CASP4-201ENST00000393150 WDR70Q9NW82 654 aa12.01□□□□□ -0.49
CASP4-201ENST00000393150 SETBP1Q9Y6X0 1596 aa12□□□□□ -0.49
CASP4-201ENST00000393150 ATRNO75882 1429 aa12□□□□□ -0.49
CASP4-201ENST00000393150 ESCO1Q5FWF5 840 aa12□□□□□ -0.49
CASP4-201ENST00000393150 CCDC9Q9Y3X0 531 aaKnown RBP12□□□□□ -0.49
CASP4-201ENST00000393150 NHSL1Q5SYE7 1610 aa12□□□□□ -0.49
CASP4-201ENST00000393150 PTPRUQ92729 1446 aa11.99□□□□□ -0.49
CASP4-201ENST00000393150 BAG6P46379 1132 aa11.99□□□□□ -0.49
CASP4-201ENST00000393150 UNC5CLQ8IV45 518 aa11.99□□□□□ -0.49
CASP4-201ENST00000393150 MYO5BQ9ULV0 1848 aa11.99□□□□□ -0.49
CASP4-201ENST00000393150 A0A0G2JS52 829 aa11.98□□□□□ -0.49
CASP4-201ENST00000393150 MYT1Q01538 1121 aa11.98□□□□□ -0.49
CASP4-201ENST00000393150 NBR1Q14596 966 aa11.98□□□□□ -0.49
CASP4-201ENST00000393150 MFSD10Q14728 455 aa11.98□□□□□ -0.49
CASP4-201ENST00000393150 ORAI2Q96SN7 254 aa11.98□□□□□ -0.49
CASP4-201ENST00000393150 C1orf167Q5SNV9 1468 aa11.98□□□□□ -0.49
CASP4-201ENST00000393150 NUP155O75694 1391 aa11.97□□□□□ -0.49
CASP4-201ENST00000393150 OCEL1Q9H607 264 aa11.97□□□□□ -0.49
CASP4-201ENST00000393150 ADGRL2O95490 1459 aa11.96□□□□□ -0.49
CASP4-201ENST00000393150 PDE4AP27815 886 aa11.96□□□□□ -0.49
CASP4-201ENST00000393150 DEFB132Q7Z7B7 95 aa11.96□□□□□ -0.49
CASP4-201ENST00000393150 LARP6Q9BRS8 491 aaKnown RBP11.96□□□□□ -0.49
CASP4-201ENST00000393150 METP08581 1390 aa11.96□□□□□ -0.5
CASP4-201ENST00000393150 MICALL2Q8IY33 904 aa11.95□□□□□ -0.5
CASP4-201ENST00000393150 PRKCSHP14314 528 aaPredicted RBP11.94□□□□□ -0.5
CASP4-201ENST00000393150 SEPT12Q8IYM1 358 aa11.94□□□□□ -0.5
CASP4-201ENST00000393150 POTEFA5A3E0 1075 aa11.93□□□□□ -0.5
CASP4-201ENST00000393150 FOXO3O43524 673 aa11.93□□□□□ -0.5
CASP4-201ENST00000393150 KRT27Q7Z3Y8 459 aa11.93□□□□□ -0.5
CASP4-201ENST00000393150 TMEM121BQ9BXQ6 578 aaPredicted RBP11.93□□□□□ -0.5
CASP4-201ENST00000393150 UNC13BO14795 1591 aa11.93□□□□□ -0.5
CASP4-201ENST00000393150 EP400Q96L91 3159 aa11.93□□□□□ -0.5
CASP4-201ENST00000393150 PSDA5PKW4 1024 aaPredicted RBP11.92□□□□□ -0.5
CASP4-201ENST00000393150 YY1P25490 414 aa11.92□□□□□ -0.5
CASP4-201ENST00000393150 E2F4Q16254 413 aa11.92□□□□□ -0.5
CASP4-201ENST00000393150 COLQQ9Y215 455 aaPredicted RBP11.92□□□□□ -0.5
CASP4-201ENST00000393150 BCL9LQ86UU0 1499 aa11.92□□□□□ -0.5
CASP4-201ENST00000393150 HRCP23327 699 aa11.91□□□□□ -0.5
CASP4-201ENST00000393150 PSME1Q06323 249 aa11.91□□□□□ -0.5
CASP4-201ENST00000393150 XRN1Q8IZH2 1706 aaKnown RBP11.91□□□□□ -0.5
CASP4-201ENST00000393150 LOC105371045A0A1W2PR82 267 aa11.9□□□□□ -0.5
CASP4-201ENST00000393150 PLSCR2Q9NRY7 297 aa11.9□□□□□ -0.5
CASP4-201ENST00000393150 HFM1A2PYH4 1435 aa11.9□□□□□ -0.5
CASP4-201ENST00000393150 XPCQ01831 940 aaPredicted RBP11.89□□□□□ -0.51
CASP4-201ENST00000393150 VPS72Q15906 364 aa11.89□□□□□ -0.51
CASP4-201ENST00000393150 DDX27Q96GQ7 796 aaKnown RBP11.89□□□□□ -0.51
CASP4-201ENST00000393150 PLCG2P16885 1265 aa11.88□□□□□ -0.51
CASP4-201ENST00000393150 LMOD2Q6P5Q4 547 aa11.88□□□□□ -0.51
CASP4-201ENST00000393150 GPHNQ9NQX3 736 aaPredicted RBP11.88□□□□□ -0.51
CASP4-201ENST00000393150 BOLA1Q9Y3E2 137 aa11.88□□□□□ -0.51
CASP4-201ENST00000393150 MYOM2P54296 1465 aa11.88□□□□□ -0.51
CASP4-201ENST00000393150 RALGAPBQ86X10 1494 aa11.88□□□□□ -0.51
CASP4-201ENST00000393150 ROCK1Q13464 1354 aa11.88□□□□□ -0.51
CASP4-201ENST00000393150 RPGRIP1LQ68CZ1 1315 aa11.87□□□□□ -0.51
CASP4-201ENST00000393150 LRP5O75197 1615 aa11.87□□□□□ -0.51
CASP4-201ENST00000393150 E9PCH4 1651 aa11.87□□□□□ -0.51
CASP4-201ENST00000393150 ITGAEP38570 1179 aa11.86□□□□□ -0.51
CASP4-201ENST00000393150 CAMK2BQ13554 666 aa11.86□□□□□ -0.51
CASP4-201ENST00000393150 ARHGEF1Q92888 912 aaKnown RBP11.86□□□□□ -0.51
CASP4-201ENST00000393150 PPP1R1BQ9UD71 204 aaPredicted RBP11.86□□□□□ -0.51
CASP4-201ENST00000393150 ROBO2Q9HCK4 1378 aa11.86□□□□□ -0.51
CASP4-201ENST00000393150 NUTM2FA1L443 756 aa11.86□□□□□ -0.51
CASP4-201ENST00000393150 R3HDM1Q15032 1099 aaKnown RBP11.86□□□□□ -0.51
CASP4-201ENST00000393150 KRT28Q7Z3Y7 464 aa11.86□□□□□ -0.51
CASP4-201ENST00000393150 SLC39A7Q92504 469 aa11.86□□□□□ -0.51
CASP4-201ENST00000393150 LAMC1P11047 1609 aa11.85□□□□□ -0.51
CASP4-201ENST00000393150 IQGAP3Q86VI3 1631 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms