RNA–Protein interactions for RNA: ENST00000392854.4

LYPD6-202, Transcript of LY6/PLAUR domain containing 6, humanhuman

TSL 1 (best)

Gene LYPD6, Length 1,580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYPD6-202ENST00000392854 ARHGEF10O15013 1369 aa9.32□□□□□ -0.92
LYPD6-202ENST00000392854 QTRT2Q9H974 415 aaKnown RBP9.32□□□□□ -0.92
LYPD6-202ENST00000392854 ACEP12821 1306 aa9.32□□□□□ -0.92
LYPD6-202ENST00000392854 POLR3AO14802 1390 aaPredicted RBP9.32□□□□□ -0.92
LYPD6-202ENST00000392854 RALGAPBQ86X10 1494 aa9.31□□□□□ -0.92
LYPD6-202ENST00000392854 PAK3O75914 559 aaPredicted RBP9.31□□□□□ -0.92
LYPD6-202ENST00000392854 RXRBP28702 533 aa9.31□□□□□ -0.92
LYPD6-202ENST00000392854 HAP1P54257 671 aaPredicted RBP9.31□□□□□ -0.92
LYPD6-202ENST00000392854 USP21Q9UK80 565 aa9.31□□□□□ -0.92
LYPD6-202ENST00000392854 TRPM3Q9HCF6 1732 aaPredicted RBP9.3□□□□□ -0.92
LYPD6-202ENST00000392854 CABLES1Q8TDN4 633 aa9.3□□□□□ -0.92
LYPD6-202ENST00000392854 CABP1Q9NZU7 370 aa9.3□□□□□ -0.92
LYPD6-202ENST00000392854 TOPAZ1Q8N9V7 1692 aa9.3□□□□□ -0.92
LYPD6-202ENST00000392854 MARF1Q9Y4F3 1742 aaKnown RBP9.3□□□□□ -0.92
LYPD6-202ENST00000392854 SBNO2Q9Y2G9 1366 aa9.29□□□□□ -0.92
LYPD6-202ENST00000392854 PPIP5K1Q6PFW1 1433 aa9.29□□□□□ -0.92
LYPD6-202ENST00000392854 ALS2Q96Q42 1657 aa9.29□□□□□ -0.92
LYPD6-202ENST00000392854 PLEKHG5O94827 1062 aa9.29□□□□□ -0.92
LYPD6-202ENST00000392854 RBM6P78332 1123 aaKnown RBP9.29□□□□□ -0.92
LYPD6-202ENST00000392854 CCER1Q8TC90 406 aaPredicted RBP9.29□□□□□ -0.92
LYPD6-202ENST00000392854 TRPC5Q9UL62 973 aaPredicted RBP9.29□□□□□ -0.92
LYPD6-202ENST00000392854 U3KPZ7 1027 aaPredicted RBP9.29□□□□□ -0.92
LYPD6-202ENST00000392854 SLC24A1O60721 1099 aa9.28□□□□□ -0.92
LYPD6-202ENST00000392854 ZNF692Q9BU19 519 aaPredicted RBP9.28□□□□□ -0.92
LYPD6-202ENST00000392854 BCL9LQ86UU0 1499 aa9.27□□□□□ -0.93
LYPD6-202ENST00000392854 BRD4O60885 1362 aaPredicted RBP9.27□□□□□ -0.93
LYPD6-202ENST00000392854 ST20-MTHFSA0A0A6YYL1 179 aa9.27□□□□□ -0.93
LYPD6-202ENST00000392854 ABTB2Q8N961 1025 aa9.27□□□□□ -0.93
LYPD6-202ENST00000392854 CDK12Q9NYV4 1490 aaPredicted RBP9.26□□□□□ -0.93
LYPD6-202ENST00000392854 ATAD2Q6PL18 1390 aa9.26□□□□□ -0.93
LYPD6-202ENST00000392854 FAM83GA6ND36 823 aa9.26□□□□□ -0.93
LYPD6-202ENST00000392854 UNC5CLQ8IV45 518 aa9.26□□□□□ -0.93
LYPD6-202ENST00000392854 PUS7Q96PZ0 661 aaKnown RBP9.26□□□□□ -0.93
LYPD6-202ENST00000392854 SLIT2O94813 1529 aa9.26□□□□□ -0.93
LYPD6-202ENST00000392854 ATRNO75882 1429 aa9.26□□□□□ -0.93
LYPD6-202ENST00000392854 NUTM2GQ5VZR2 741 aa9.25□□□□□ -0.93
LYPD6-202ENST00000392854 NLRP13Q86W25 1043 aa9.25□□□□□ -0.93
LYPD6-202ENST00000392854 ABCA3Q99758 1704 aa9.25□□□□□ -0.93
LYPD6-202ENST00000392854 GJD4Q96KN9 370 aaPredicted RBP9.24□□□□□ -0.93
LYPD6-202ENST00000392854 TESK2Q96S53 571 aa9.24□□□□□ -0.93
LYPD6-202ENST00000392854 USP6P35125 1406 aa9.24□□□□□ -0.93
LYPD6-202ENST00000392854 CAPN15O75808 1086 aa9.24□□□□□ -0.93
LYPD6-202ENST00000392854 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.23□□□□□ -0.93
LYPD6-202ENST00000392854 CRYBG1Q9Y4K1 1723 aa9.23□□□□□ -0.93
LYPD6-202ENST00000392854 NLRP6P59044 892 aa9.23□□□□□ -0.93
LYPD6-202ENST00000392854 VPS72Q15906 364 aa9.23□□□□□ -0.93
LYPD6-202ENST00000392854 BTG4Q9NY30 223 aa9.23□□□□□ -0.93
LYPD6-202ENST00000392854 CPSF1Q10570 1443 aaKnown RBP9.23□□□□□ -0.93
LYPD6-202ENST00000392854 SSH2Q76I76 1423 aa9.23□□□□□ -0.93
LYPD6-202ENST00000392854 GCP02774 474 aa9.22□□□□□ -0.93
LYPD6-202ENST00000392854 ZC3H6P61129 1189 aaKnown RBP9.22□□□□□ -0.93
LYPD6-202ENST00000392854 TMC1Q8TDI8 760 aa9.22□□□□□ -0.93
LYPD6-202ENST00000392854 SLC12A5Q9H2X9 1139 aa9.22□□□□□ -0.93
LYPD6-202ENST00000392854 PRDM11Q9NQV5 511 aa9.22□□□□□ -0.93
LYPD6-202ENST00000392854 NWD2Q9ULI1 1742 aa9.22□□□□□ -0.93
LYPD6-202ENST00000392854 USP47Q96K76 1375 aa9.22□□□□□ -0.93
LYPD6-202ENST00000392854 USP19O94966 1318 aa9.22□□□□□ -0.93
LYPD6-202ENST00000392854 TTC21BQ7Z4L5 1316 aa9.22□□□□□ -0.93
LYPD6-202ENST00000392854 TTC21AQ8NDW8 1320 aa9.22□□□□□ -0.93
LYPD6-202ENST00000392854 RGS12O14924 1447 aa9.21□□□□□ -0.93
LYPD6-202ENST00000392854 TMF1P82094 1093 aa9.21□□□□□ -0.93
LYPD6-202ENST00000392854 PLCH1Q4KWH8 1693 aa9.21□□□□□ -0.93
LYPD6-202ENST00000392854 COL14A1Q05707 1796 aaKnown RBP9.21□□□□□ -0.93
LYPD6-202ENST00000392854 KTN1Q86UP2 1357 aaKnown RBP9.21□□□□□ -0.93
LYPD6-202ENST00000392854 KIAA0232Q92628 1395 aa9.21□□□□□ -0.93
LYPD6-202ENST00000392854 PHRF1Q9P1Y6 1649 aaKnown RBP9.21□□□□□ -0.94
LYPD6-202ENST00000392854 AKAP12Q02952 1782 aa9.2□□□□□ -0.94
LYPD6-202ENST00000392854 HDGFL2Q7Z4V5 671 aaPredicted RBP9.2□□□□□ -0.94
LYPD6-202ENST00000392854 TERF2IPQ9NYB0 399 aa9.2□□□□□ -0.94
LYPD6-202ENST00000392854 CCDC9Q9Y3X0 531 aaKnown RBP9.2□□□□□ -0.94
LYPD6-202ENST00000392854 ONECUT3O60422 494 aaPredicted RBP9.2□□□□□ -0.94
LYPD6-202ENST00000392854 CHRNA2Q15822 529 aa9.2□□□□□ -0.94
LYPD6-202ENST00000392854 CPDO75976 1380 aa9.2□□□□□ -0.94
LYPD6-202ENST00000392854 CD163L1Q9NR16 1453 aa9.19□□□□□ -0.94
LYPD6-202ENST00000392854 CDCA8Q53HL2 280 aa9.19□□□□□ -0.94
LYPD6-202ENST00000392854 UPF1Q92900 1129 aaKnown RBP eCLIP9.19□□□□□ -0.94
LYPD6-202ENST00000392854 SPINK5Q9NQ38 1064 aaPredicted RBP9.19□□□□□ -0.94
LYPD6-202ENST00000392854 NINLQ9Y2I6 1382 aa9.19□□□□□ -0.94
LYPD6-202ENST00000392854 GLI3P10071 1580 aa9.19□□□□□ -0.94
LYPD6-202ENST00000392854 NRKQ7Z2Y5 1582 aa9.18□□□□□ -0.94
LYPD6-202ENST00000392854 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.18□□□□□ -0.94
LYPD6-202ENST00000392854 KCNH5Q8NCM2 988 aa9.18□□□□□ -0.94
LYPD6-202ENST00000392854 NRAPQ86VF7 1730 aa9.18□□□□□ -0.94
LYPD6-202ENST00000392854 PIK3C2AO00443 1686 aa9.18□□□□□ -0.94
LYPD6-202ENST00000392854 MON2Q7Z3U7 1717 aa9.17□□□□□ -0.94
LYPD6-202ENST00000392854 DSG3P32926 999 aa9.17□□□□□ -0.94
LYPD6-202ENST00000392854 EVA1CP58658 441 aa9.17□□□□□ -0.94
LYPD6-202ENST00000392854 SEPT12Q8IYM1 358 aa9.17□□□□□ -0.94
LYPD6-202ENST00000392854 STRN4Q9NRL3 753 aa9.17□□□□□ -0.94
LYPD6-202ENST00000392854 SLIT3O75094 1523 aa9.17□□□□□ -0.94
LYPD6-202ENST00000392854 SPATA31A5Q5VU36 1347 aa9.17□□□□□ -0.94
LYPD6-202ENST00000392854 SPATA31A7Q8IWB4 1347 aa9.17□□□□□ -0.94
LYPD6-202ENST00000392854 A0A1W2PP64 1363 aa9.17□□□□□ -0.94
LYPD6-202ENST00000392854 USP31Q70CQ4 1352 aa9.17□□□□□ -0.94
LYPD6-202ENST00000392854 EIF4G2P78344 907 aaKnown RBP eCLIP9.16□□□□□ -0.94
LYPD6-202ENST00000392854 EDC4Q6P2E9 1401 aaKnown RBP9.16□□□□□ -0.94
LYPD6-202ENST00000392854 AATKQ6ZMQ8 1374 aa9.16□□□□□ -0.94
LYPD6-202ENST00000392854 CAMTA1Q9Y6Y1 1673 aa9.16□□□□□ -0.94
LYPD6-202ENST00000392854 FAM98CQ17RN3 349 aaKnown RBP9.16□□□□□ -0.94
LYPD6-202ENST00000392854 ARHGEF25Q86VW2 580 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms