RNA–Protein interactions for RNA: ENST00000392202.7

PIKFYVE-203, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 1 (best) BASIC

Gene PIKFYVE, Length 2,039 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-203ENST00000392202 LTBP4Q8N2S1 1624 aa29.92■■■□□ 2.38
PIKFYVE-203ENST00000392202 NGDNQ8NEJ9 315 aaKnown RBP29.91■■■□□ 2.38
PIKFYVE-203ENST00000392202 CADPS2Q86UW7 1296 aa29.9■■■□□ 2.38
PIKFYVE-203ENST00000392202 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.89■■■□□ 2.385e-8■□□□□ 11.2
PIKFYVE-203ENST00000392202 GGNBP2Q9H3C7 697 aa29.89■■■□□ 2.38
PIKFYVE-203ENST00000392202 TTC21BQ7Z4L5 1316 aa29.89■■■□□ 2.38
PIKFYVE-203ENST00000392202 ESCO1Q5FWF5 840 aa29.87■■■□□ 2.37
PIKFYVE-203ENST00000392202 TTC21AQ8NDW8 1320 aa29.85■■■□□ 2.37
PIKFYVE-203ENST00000392202 NME9Q86XW9 330 aa29.83■■■□□ 2.37
PIKFYVE-203ENST00000392202 ORAI2Q96SN7 254 aa29.83■■■□□ 2.37
PIKFYVE-203ENST00000392202 PIK3C2AO00443 1686 aa29.82■■■□□ 2.36
PIKFYVE-203ENST00000392202 USP54Q70EL1 1684 aa29.82■■■□□ 2.36
PIKFYVE-203ENST00000392202 OVOS2A0A0J9YW53 1432 aa29.8■■■□□ 2.36
PIKFYVE-203ENST00000392202 OVOS2Q6IE36 1432 aa29.8■■■□□ 2.36
PIKFYVE-203ENST00000392202 SCAF1Q9H7N4 1312 aaKnown RBP29.79■■■□□ 2.36
PIKFYVE-203ENST00000392202 PNISRQ8TF01 805 aaKnown RBP29.78■■■□□ 2.36
PIKFYVE-203ENST00000392202 TRPM3Q9HCF6 1732 aaPredicted RBP29.77■■■□□ 2.36
PIKFYVE-203ENST00000392202 USP31Q70CQ4 1352 aa29.76■■■□□ 2.36
PIKFYVE-203ENST00000392202 TNNT2P45379 298 aaPredicted RBP29.76■■■□□ 2.36
PIKFYVE-203ENST00000392202 COG3Q96JB2 828 aa29.76■■■□□ 2.35
PIKFYVE-203ENST00000392202 YTHDC1Q96MU7 727 aaKnown RBP29.76■■■□□ 2.35
PIKFYVE-203ENST00000392202 ZRANB1Q9UGI0 708 aa29.76■■■□□ 2.35
PIKFYVE-203ENST00000392202 MARF1Q9Y4F3 1742 aaKnown RBP29.75■■■□□ 2.35
PIKFYVE-203ENST00000392202 PSME1Q06323 249 aa29.72■■■□□ 2.35
PIKFYVE-203ENST00000392202 FAM9BQ8IZU0 186 aa29.72■■■□□ 2.35
PIKFYVE-203ENST00000392202 AATKQ6ZMQ8 1374 aa29.72■■■□□ 2.35
PIKFYVE-203ENST00000392202 MAP2P11137 1827 aaKnown RBP29.71■■■□□ 2.35
PIKFYVE-203ENST00000392202 FOXO3O43524 673 aa29.71■■■□□ 2.35
PIKFYVE-203ENST00000392202 MTHFSP49914 203 aa29.69■■■□□ 2.34
PIKFYVE-203ENST00000392202 SMG6Q86US8 1419 aaKnown RBP29.68■■■□□ 2.34
PIKFYVE-203ENST00000392202 SLAIN2Q9P270 581 aa29.67■■■□□ 2.34
PIKFYVE-203ENST00000392202 SHPRHQ149N8 1683 aa29.67■■■□□ 2.34
PIKFYVE-203ENST00000392202 ALS2Q96Q42 1657 aa29.66■■■□□ 2.34
PIKFYVE-203ENST00000392202 KRT28Q7Z3Y7 464 aa29.66■■■□□ 2.34
PIKFYVE-203ENST00000392202 PAK3O75914 559 aaPredicted RBP29.65■■■□□ 2.34
PIKFYVE-203ENST00000392202 BRINP3Q76B58 766 aa29.65■■■□□ 2.34
PIKFYVE-203ENST00000392202 NPHP3Q7Z494 1330 aa29.65■■■□□ 2.34
PIKFYVE-203ENST00000392202 INSRP06213 1382 aa29.64■■■□□ 2.34
PIKFYVE-203ENST00000392202 COL3A1P02461 1466 aaPredicted RBP29.63■■■□□ 2.33
PIKFYVE-203ENST00000392202 ABTB2Q8N961 1025 aa29.63■■■□□ 2.33
PIKFYVE-203ENST00000392202 CFAP53Q96M91 514 aa29.63■■■□□ 2.33
PIKFYVE-203ENST00000392202 PXDNQ92626 1479 aa29.63■■■□□ 2.33
PIKFYVE-203ENST00000392202 NLRP6P59044 892 aa29.62■■■□□ 2.33
PIKFYVE-203ENST00000392202 POLKQ9UBT6 870 aa29.62■■■□□ 2.33
PIKFYVE-203ENST00000392202 SBNO1A3KN83 1393 aa29.61■■■□□ 2.33
PIKFYVE-203ENST00000392202 XPCQ01831 940 aaPredicted RBP29.61■■■□□ 2.33
PIKFYVE-203ENST00000392202 NHSL1Q5SYE7 1610 aa29.61■■■□□ 2.33
PIKFYVE-203ENST00000392202 PNPLA6Q8IY17 1366 aa29.61■■■□□ 2.33
PIKFYVE-203ENST00000392202 CDK12Q9NYV4 1490 aaPredicted RBP29.6■■■□□ 2.33
PIKFYVE-203ENST00000392202 DDX17Q92841 729 aaKnown RBP29.59■■■□□ 2.33
PIKFYVE-203ENST00000392202 FBLN1P23142 703 aa29.58■■■□□ 2.33
PIKFYVE-203ENST00000392202 WDR43Q15061 677 aaKnown RBP eCLIP29.57■■■□□ 2.32
PIKFYVE-203ENST00000392202 BLMP54132 1417 aaPredicted RBP29.56■■■□□ 2.32
PIKFYVE-203ENST00000392202 SLIT3O75094 1523 aa29.56■■■□□ 2.32
PIKFYVE-203ENST00000392202 EMILIN1Q9Y6C2 1016 aa29.55■■■□□ 2.32
PIKFYVE-203ENST00000392202 NUTM2GQ5VZR2 741 aa29.54■■■□□ 2.32
PIKFYVE-203ENST00000392202 TNS3Q68CZ2 1445 aa29.54■■■□□ 2.32
PIKFYVE-203ENST00000392202 PEAK1Q9H792 1746 aa29.54■■■□□ 2.32
PIKFYVE-203ENST00000392202 NFAT5O94916 1531 aa29.53■■■□□ 2.32
PIKFYVE-203ENST00000392202 RRS1Q15050 365 aaKnown RBP29.53■■■□□ 2.32
PIKFYVE-203ENST00000392202 HNRNPUQ00839 825 aaKnown RBP eCLIP29.52■■■□□ 2.32
PIKFYVE-203ENST00000392202 ADAMTS8Q9UP79 889 aa29.52■■■□□ 2.32
PIKFYVE-203ENST00000392202 ROBO1Q9Y6N7 1651 aa29.52■■■□□ 2.32
PIKFYVE-203ENST00000392202 SOS2Q07890 1332 aaPredicted RBP29.51■■■□□ 2.31
PIKFYVE-203ENST00000392202 USP19O94966 1318 aa29.51■■■□□ 2.31
PIKFYVE-203ENST00000392202 IQSEC2Q5JU85 1478 aa29.5■■■□□ 2.31
PIKFYVE-203ENST00000392202 SPATA31A3Q5VYP0 1347 aa29.49■■■□□ 2.31
PIKFYVE-203ENST00000392202 LTN1O94822 1766 aa29.48■■■□□ 2.31
PIKFYVE-203ENST00000392202 MED1Q15648 1581 aaPredicted RBP29.48■■■□□ 2.31
PIKFYVE-203ENST00000392202 CRYBG1Q9Y4K1 1723 aa29.48■■■□□ 2.31
PIKFYVE-203ENST00000392202 MAP3K19Q56UN5 1328 aa29.48■■■□□ 2.31
PIKFYVE-203ENST00000392202 PHRF1Q9P1Y6 1649 aaKnown RBP29.47■■■□□ 2.31
PIKFYVE-203ENST00000392202 PPM1GO15355 546 aaPredicted RBP29.47■■■□□ 2.31
PIKFYVE-203ENST00000392202 KIF24Q5T7B8 1368 aa29.47■■■□□ 2.31
PIKFYVE-203ENST00000392202 DIAPH1O60610 1272 aaKnown RBP29.47■■■□□ 2.31
PIKFYVE-203ENST00000392202 KCNH5Q8NCM2 988 aa29.47■■■□□ 2.31
PIKFYVE-203ENST00000392202 AHDC1Q5TGY3 1603 aaPredicted RBP29.46■■■□□ 2.31
PIKFYVE-203ENST00000392202 ARHGEF10O15013 1369 aa29.46■■■□□ 2.31
PIKFYVE-203ENST00000392202 SOX12O15370 315 aa29.46■■■□□ 2.31
PIKFYVE-203ENST00000392202 CENPBP07199 599 aaPredicted RBP29.46■■■□□ 2.31
PIKFYVE-203ENST00000392202 NUDCQ9Y266 331 aa29.45■■■□□ 2.31
PIKFYVE-203ENST00000392202 LMOD2Q6P5Q4 547 aa29.45■■■□□ 2.3
PIKFYVE-203ENST00000392202 CERKQ8TCT0 537 aa29.45■■■□□ 2.3
PIKFYVE-203ENST00000392202 FLT4P35916 1363 aa29.44■■■□□ 2.3
PIKFYVE-203ENST00000392202 RTL1A6NKG5 1358 aa29.42■■■□□ 2.3
PIKFYVE-203ENST00000392202 TOM1O60784 492 aa29.41■■■□□ 2.3
PIKFYVE-203ENST00000392202 ZBED9Q6R2W3 1325 aa29.41■■■□□ 2.3
PIKFYVE-203ENST00000392202 GCP02774 474 aa29.4■■■□□ 2.3
PIKFYVE-203ENST00000392202 UBAP1LF5GYI3 381 aa29.39■■■□□ 2.3
PIKFYVE-203ENST00000392202 IL13P35225 146 aa29.39■■■□□ 2.3
PIKFYVE-203ENST00000392202 U2AF1L5P0DN76 240 aaPredicted RBP29.37■■■□□ 2.29
PIKFYVE-203ENST00000392202 AMPHP49418 695 aa29.37■■■□□ 2.29
PIKFYVE-203ENST00000392202 U2AF1Q01081 240 aaKnown RBP eCLIP29.37■■■□□ 2.293e-7■■■■□ 21.6
PIKFYVE-203ENST00000392202 RGPD1P0DJD0 1748 aa29.37■■■□□ 2.29
PIKFYVE-203ENST00000392202 U2SURPO15042 1029 aaKnown RBP29.37■■■□□ 2.29
PIKFYVE-203ENST00000392202 PIP4K2BP78356 416 aa29.36■■■□□ 2.29
PIKFYVE-203ENST00000392202 ABCA3Q99758 1704 aa29.36■■■□□ 2.29
PIKFYVE-203ENST00000392202 HSP90AB2PQ58FF8 381 aa29.35■■■□□ 2.29
PIKFYVE-203ENST00000392202 PLEKHG5O94827 1062 aa29.35■■■□□ 2.29
PIKFYVE-203ENST00000392202 HOXC9P31274 260 aa29.35■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms