RNA–Protein interactions for RNA: ENST00000392000.4

LRRFIP1-204, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRRFIP1, Length 3,365 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-204ENST00000392000 SSFA2P28290 1259 aa18.17■□□□□ 0.5
LRRFIP1-204ENST00000392000 RBM10P98175 930 aaKnown RBP18.17■□□□□ 0.5
LRRFIP1-204ENST00000392000 PLPPR3Q6T4P5 718 aa18.17■□□□□ 0.5
LRRFIP1-204ENST00000392000 ZRANB1Q9UGI0 708 aa18.17■□□□□ 0.5
LRRFIP1-204ENST00000392000 ZFYVE16Q7Z3T8 1539 aa18.17■□□□□ 0.5
LRRFIP1-204ENST00000392000 ATP7AQ04656 1500 aa18.17■□□□□ 0.5
LRRFIP1-204ENST00000392000 DIAPH1O60610 1272 aaKnown RBP18.17■□□□□ 0.5
LRRFIP1-204ENST00000392000 DCTN1Q14203 1278 aa18.17■□□□□ 0.5
LRRFIP1-204ENST00000392000 CHAMP1Q96JM3 812 aa18.16■□□□□ 0.5
LRRFIP1-204ENST00000392000 GBP4Q96PP9 640 aa18.16■□□□□ 0.5
LRRFIP1-204ENST00000392000 DDX11L8A8MPP1 907 aa18.15■□□□□ 0.5
LRRFIP1-204ENST00000392000 NGEFQ8N5V2 710 aa18.15■□□□□ 0.5
LRRFIP1-204ENST00000392000 TSPYL6Q8N831 410 aa18.15■□□□□ 0.5
LRRFIP1-204ENST00000392000 MYOM1P52179 1685 aa18.15■□□□□ 0.5
LRRFIP1-204ENST00000392000 PHACTR3Q96KR7 559 aa18.14■□□□□ 0.5
LRRFIP1-204ENST00000392000 ERBB4Q15303 1308 aa18.14■□□□□ 0.5
LRRFIP1-204ENST00000392000 NCKAP5LQ9HCH0 1330 aa18.14■□□□□ 0.49
LRRFIP1-204ENST00000392000 SPHKAPQ2M3C7 1700 aa18.14■□□□□ 0.49
LRRFIP1-204ENST00000392000 ABCA6Q8N139 1617 aa18.14■□□□□ 0.49
LRRFIP1-204ENST00000392000 MCTP1Q6DN14 999 aa18.13■□□□□ 0.49
LRRFIP1-204ENST00000392000 FAM83GA6ND36 823 aa18.13■□□□□ 0.49
LRRFIP1-204ENST00000392000 A0A1W2PP64 1363 aa18.13■□□□□ 0.49
LRRFIP1-204ENST00000392000 ATAD2Q6PL18 1390 aa18.13■□□□□ 0.49
LRRFIP1-204ENST00000392000 RTEL1-TNFRSF6BF6WH68 1400 aa18.13■□□□□ 0.49
LRRFIP1-204ENST00000392000 CDK19Q9BWU1 502 aa18.12■□□□□ 0.49
LRRFIP1-204ENST00000392000 GOLGA6L22H0YM25 854 aa18.12■□□□□ 0.49
LRRFIP1-204ENST00000392000 EMILIN1Q9Y6C2 1016 aa18.12■□□□□ 0.49
LRRFIP1-204ENST00000392000 NPATQ14207 1427 aa18.12■□□□□ 0.49
LRRFIP1-204ENST00000392000 CHD1LQ86WJ1 897 aa18.11■□□□□ 0.49
LRRFIP1-204ENST00000392000 PHF23Q9BUL5 403 aaPredicted RBP18.11■□□□□ 0.49
LRRFIP1-204ENST00000392000 TERF2IPQ9NYB0 399 aa18.11■□□□□ 0.49
LRRFIP1-204ENST00000392000 ASXL2Q76L83 1435 aa18.11■□□□□ 0.49
LRRFIP1-204ENST00000392000 CAVIN1Q6NZI2 390 aaKnown RBP18.11■□□□□ 0.49
LRRFIP1-204ENST00000392000 IPO8O15397 1037 aaKnown RBP18.1■□□□□ 0.49
LRRFIP1-204ENST00000392000 RRS1Q15050 365 aaKnown RBP18.1■□□□□ 0.49
LRRFIP1-204ENST00000392000 RNF214Q8ND24 703 aa18.09■□□□□ 0.49
LRRFIP1-204ENST00000392000 CLCN1P35523 988 aa18.09■□□□□ 0.49
LRRFIP1-204ENST00000392000 HDGFL2Q7Z4V5 671 aaPredicted RBP18.09■□□□□ 0.49
LRRFIP1-204ENST00000392000 PLEKHF1Q96S99 279 aa18.09■□□□□ 0.49
LRRFIP1-204ENST00000392000 KRT24Q2M2I5 525 aa18.08■□□□□ 0.49
LRRFIP1-204ENST00000392000 GAS2L2Q8NHY3 880 aa18.08■□□□□ 0.49
LRRFIP1-204ENST00000392000 CEP152O94986 1710 aa18.08■□□□□ 0.49
LRRFIP1-204ENST00000392000 MAP3K4Q9Y6R4 1608 aa18.08■□□□□ 0.49
LRRFIP1-204ENST00000392000 NASPP49321 788 aaPredicted RBP18.08■□□□□ 0.48
LRRFIP1-204ENST00000392000 ZMYND15Q9H091 742 aa18.08■□□□□ 0.48
LRRFIP1-204ENST00000392000 FSD2A1L4K1 749 aa18.08■□□□□ 0.48
LRRFIP1-204ENST00000392000 MSNP26038 577 aaKnown RBP18.08■□□□□ 0.48
LRRFIP1-204ENST00000392000 C16orf71Q8IYS4 520 aaPredicted RBP18.08■□□□□ 0.48
LRRFIP1-204ENST00000392000 FAM13BQ9NYF5 915 aa18.08■□□□□ 0.48
LRRFIP1-204ENST00000392000 PKNOX2Q96KN3 472 aa18.07■□□□□ 0.48
LRRFIP1-204ENST00000392000 ZBTB40Q9NUA8 1239 aa18.07■□□□□ 0.48
LRRFIP1-204ENST00000392000 ZNF518AQ6AHZ1 1483 aa18.07■□□□□ 0.48
LRRFIP1-204ENST00000392000 CD109Q6YHK3 1445 aa18.07■□□□□ 0.48
LRRFIP1-204ENST00000392000 NINLQ9Y2I6 1382 aa18.06■□□□□ 0.48
LRRFIP1-204ENST00000392000 CCDC27Q2M243 656 aa18.06■□□□□ 0.48
LRRFIP1-204ENST00000392000 TBC1D9Q6ZT07 1266 aa18.06■□□□□ 0.48
LRRFIP1-204ENST00000392000 ANKRD36BQ8N2N9 1353 aa18.05■□□□□ 0.48
LRRFIP1-204ENST00000392000 KIAA1211Q6ZU35 1233 aa18.05■□□□□ 0.48
LRRFIP1-204ENST00000392000 NME9Q86XW9 330 aa18.05■□□□□ 0.48
LRRFIP1-204ENST00000392000 CLASP1Q7Z460 1538 aa18.05■□□□□ 0.48
LRRFIP1-204ENST00000392000 SMARCA5O60264 1052 aaPredicted RBP18.05■□□□□ 0.48
LRRFIP1-204ENST00000392000 PLEKHG5O94827 1062 aa18.05■□□□□ 0.48
LRRFIP1-204ENST00000392000 PKP1Q13835 747 aa18.05■□□□□ 0.48
LRRFIP1-204ENST00000392000 RBM27Q9P2N5 1060 aaKnown RBP18.05■□□□□ 0.48
LRRFIP1-204ENST00000392000 R3HCC1Q9Y3T6 440 aaKnown RBP18.05■□□□□ 0.48
LRRFIP1-204ENST00000392000 NLRP1Q9C000 1473 aa18.04■□□□□ 0.48
LRRFIP1-204ENST00000392000 TET3O43151 1660 aa18.04■□□□□ 0.48
LRRFIP1-204ENST00000392000 PLCB2Q00722 1185 aa18.04■□□□□ 0.48
LRRFIP1-204ENST00000392000 CALD1Q05682 793 aaKnown RBP18.04■□□□□ 0.48
LRRFIP1-204ENST00000392000 DTNBO60941 627 aa18.03■□□□□ 0.48
LRRFIP1-204ENST00000392000 PRPF40AO75400 957 aaKnown RBP18.03■□□□□ 0.48
LRRFIP1-204ENST00000392000 K7ELQ4 463 aaPredicted RBP18.03■□□□□ 0.48
LRRFIP1-204ENST00000392000 MIS18AQ9NYP9 233 aa18.03■□□□□ 0.48
LRRFIP1-204ENST00000392000 SMC5Q8IY18 1101 aa18.02■□□□□ 0.48
LRRFIP1-204ENST00000392000 C8orf58Q8NAV2 365 aa18.02■□□□□ 0.48
LRRFIP1-204ENST00000392000 SLC4A10Q6U841 1118 aa18.02■□□□□ 0.47
LRRFIP1-204ENST00000392000 OTUD7AQ8TE49 926 aaPredicted RBP18.02■□□□□ 0.47
LRRFIP1-204ENST00000392000 POLKQ9UBT6 870 aa18.02■□□□□ 0.47
LRRFIP1-204ENST00000392000 MROH2AA6NES4 1674 aa18.02■□□□□ 0.47
LRRFIP1-204ENST00000392000 HDAC1Q13547 482 aaPredicted RBP18.01■□□□□ 0.47
LRRFIP1-204ENST00000392000 TXNDC2Q86VQ3 553 aa18.01■□□□□ 0.47
LRRFIP1-204ENST00000392000 TSHZ3Q63HK5 1081 aa18.01■□□□□ 0.47
LRRFIP1-204ENST00000392000 XPCQ01831 940 aaPredicted RBP18■□□□□ 0.47
LRRFIP1-204ENST00000392000 NUCB1Q02818 461 aa18■□□□□ 0.47
LRRFIP1-204ENST00000392000 PTMAP06454 111 aaKnown RBP18■□□□□ 0.47
LRRFIP1-204ENST00000392000 MYOM2P54296 1465 aa18■□□□□ 0.47
LRRFIP1-204ENST00000392000 MBIPQ9NS73 344 aa17.99■□□□□ 0.47
LRRFIP1-204ENST00000392000 KIF16BQ96L93 1317 aa17.99■□□□□ 0.47
LRRFIP1-204ENST00000392000 NECTIN2Q92692 538 aa17.99■□□□□ 0.47
LRRFIP1-204ENST00000392000 KIF1BO60333 1816 aa17.99■□□□□ 0.47
LRRFIP1-204ENST00000392000 SBNO2Q9Y2G9 1366 aa17.99■□□□□ 0.47
LRRFIP1-204ENST00000392000 TWISTNBQ3B726 338 aaPredicted RBP17.99■□□□□ 0.47
LRRFIP1-204ENST00000392000 PPRC1Q5VV67 1664 aaKnown RBP17.98■□□□□ 0.47
LRRFIP1-204ENST00000392000 DNTTIP2Q5QJE6 756 aaKnown RBP17.98■□□□□ 0.47
LRRFIP1-204ENST00000392000 ZGPATQ8N5A5 531 aaKnown RBP17.98■□□□□ 0.47
LRRFIP1-204ENST00000392000 VAMP4O75379 141 aa17.98■□□□□ 0.47
LRRFIP1-204ENST00000392000 ZNF692Q9BU19 519 aaPredicted RBP17.98■□□□□ 0.47
LRRFIP1-204ENST00000392000 SHROOM2Q13796 1616 aa17.97■□□□□ 0.47
LRRFIP1-204ENST00000392000 BAG4O95429 457 aaKnown RBP17.97■□□□□ 0.47
LRRFIP1-204ENST00000392000 AEBP1Q8IUX7 1158 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms