RNA–Protein interactions for RNA: ENST00000391764.7

NDUFA3-204, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 3 BASIC

Gene NDUFA3, Length 267 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-204ENST00000391764 CD163L1Q9NR16 1453 aa22.66■■□□□ 1.22
NDUFA3-204ENST00000391764 PIK3C2AO00443 1686 aa22.66■■□□□ 1.22
NDUFA3-204ENST00000391764 ADAMTS2O95450 1211 aa22.66■■□□□ 1.22
NDUFA3-204ENST00000391764 HSPA5P11021 654 aaKnown RBP22.66■■□□□ 1.22
NDUFA3-204ENST00000391764 TMF1P82094 1093 aa22.66■■□□□ 1.22
NDUFA3-204ENST00000391764 CABLES1Q8TDN4 633 aa22.65■■□□□ 1.22
NDUFA3-204ENST00000391764 EIF4G2P78344 907 aaKnown RBP eCLIP22.64■■□□□ 1.21
NDUFA3-204ENST00000391764 TMC1Q8TDI8 760 aa22.64■■□□□ 1.21
NDUFA3-204ENST00000391764 CPSF1Q10570 1443 aaKnown RBP22.64■■□□□ 1.21
NDUFA3-204ENST00000391764 PLCH1Q4KWH8 1693 aa22.63■■□□□ 1.21
NDUFA3-204ENST00000391764 C8orf37Q96NL8 207 aa22.63■■□□□ 1.21
NDUFA3-204ENST00000391764 RGS17Q9UGC6 210 aaPredicted RBP22.63■■□□□ 1.21
NDUFA3-204ENST00000391764 SLC24A1O60721 1099 aa22.62■■□□□ 1.21
NDUFA3-204ENST00000391764 PUS7Q96PZ0 661 aaKnown RBP22.62■■□□□ 1.21
NDUFA3-204ENST00000391764 HAP1P54257 671 aaPredicted RBP22.61■■□□□ 1.21
NDUFA3-204ENST00000391764 NUTM2GQ5VZR2 741 aa22.61■■□□□ 1.21
NDUFA3-204ENST00000391764 SSH2Q76I76 1423 aa22.61■■□□□ 1.21
NDUFA3-204ENST00000391764 SLC12A5Q9H2X9 1139 aa22.61■■□□□ 1.21
NDUFA3-204ENST00000391764 KTN1Q86UP2 1357 aaKnown RBP22.61■■□□□ 1.21
NDUFA3-204ENST00000391764 BRD4O60885 1362 aaPredicted RBP22.6■■□□□ 1.21
NDUFA3-204ENST00000391764 AFF2P51816 1311 aa22.59■■□□□ 1.21
NDUFA3-204ENST00000391764 A0A1W2PP64 1363 aa22.59■■□□□ 1.21
NDUFA3-204ENST00000391764 NINLQ9Y2I6 1382 aa22.58■■□□□ 1.21
NDUFA3-204ENST00000391764 ABTB2Q8N961 1025 aa22.57■■□□□ 1.2
NDUFA3-204ENST00000391764 ZNF692Q9BU19 519 aaPredicted RBP22.56■■□□□ 1.2
NDUFA3-204ENST00000391764 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.55■■□□□ 1.2
NDUFA3-204ENST00000391764 CDCA8Q53HL2 280 aa22.55■■□□□ 1.2
NDUFA3-204ENST00000391764 HDGFL2Q7Z4V5 671 aaPredicted RBP22.55■■□□□ 1.2
NDUFA3-204ENST00000391764 NGLY1Q96IV0 654 aa22.55■■□□□ 1.2
NDUFA3-204ENST00000391764 USP54Q70EL1 1684 aa22.55■■□□□ 1.2
NDUFA3-204ENST00000391764 TTC21BQ7Z4L5 1316 aa22.55■■□□□ 1.2
NDUFA3-204ENST00000391764 NWD2Q9ULI1 1742 aa22.54■■□□□ 1.2
NDUFA3-204ENST00000391764 COL14A1Q05707 1796 aaKnown RBP22.54■■□□□ 1.2
NDUFA3-204ENST00000391764 POTEAQ6S8J7 498 aa22.54■■□□□ 1.2
NDUFA3-204ENST00000391764 SLIT3O75094 1523 aa22.53■■□□□ 1.2
NDUFA3-204ENST00000391764 ILDR2Q71H61 639 aa22.53■■□□□ 1.2
NDUFA3-204ENST00000391764 TERF2IPQ9NYB0 399 aa22.53■■□□□ 1.2
NDUFA3-204ENST00000391764 EDC4Q6P2E9 1401 aaKnown RBP22.53■■□□□ 1.2
NDUFA3-204ENST00000391764 USP19O94966 1318 aa22.53■■□□□ 1.2
NDUFA3-204ENST00000391764 ANKRD36BQ8N2N9 1353 aa22.52■■□□□ 1.2
NDUFA3-204ENST00000391764 NRAPQ86VF7 1730 aa22.52■■□□□ 1.2
NDUFA3-204ENST00000391764 POLR3GLQ9BT43 218 aa22.52■■□□□ 1.2
NDUFA3-204ENST00000391764 TTC21AQ8NDW8 1320 aa22.52■■□□□ 1.2
NDUFA3-204ENST00000391764 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.51■■□□□ 1.19
NDUFA3-204ENST00000391764 KIF20BQ96Q89 1820 aa22.51■■□□□ 1.19
NDUFA3-204ENST00000391764 ZNF772Q68DY9 489 aaPredicted RBP22.5■■□□□ 1.19
NDUFA3-204ENST00000391764 SLIT2O94813 1529 aa22.5■■□□□ 1.19
NDUFA3-204ENST00000391764 NLRP6P59044 892 aa22.49■■□□□ 1.19
NDUFA3-204ENST00000391764 NLRP13Q86W25 1043 aa22.49■■□□□ 1.19
NDUFA3-204ENST00000391764 BCL9LQ86UU0 1499 aa22.48■■□□□ 1.19
NDUFA3-204ENST00000391764 USP21Q9UK80 565 aa22.48■■□□□ 1.19
NDUFA3-204ENST00000391764 NME9Q86XW9 330 aa22.47■■□□□ 1.19
NDUFA3-204ENST00000391764 FNBP4Q8N3X1 1017 aaPredicted RBP22.47■■□□□ 1.19
NDUFA3-204ENST00000391764 ZRANB1Q9UGI0 708 aa22.47■■□□□ 1.19
NDUFA3-204ENST00000391764 KIAA0232Q92628 1395 aa22.47■■□□□ 1.19
NDUFA3-204ENST00000391764 LMO7Q8WWI1 1683 aa22.46■■□□□ 1.19
NDUFA3-204ENST00000391764 FAM83GA6ND36 823 aa22.45■■□□□ 1.18
NDUFA3-204ENST00000391764 C11orf95C9JLR9 678 aaPredicted RBP22.45■■□□□ 1.18
NDUFA3-204ENST00000391764 ZC3H6P61129 1189 aaKnown RBP22.45■■□□□ 1.18
NDUFA3-204ENST00000391764 ATRNO75882 1429 aa22.44■■□□□ 1.18
NDUFA3-204ENST00000391764 NFAT5O94916 1531 aa22.44■■□□□ 1.18
NDUFA3-204ENST00000391764 LTN1O94822 1766 aa22.43■■□□□ 1.18
NDUFA3-204ENST00000391764 USP31Q70CQ4 1352 aa22.43■■□□□ 1.18
NDUFA3-204ENST00000391764 GCP02774 474 aa22.43■■□□□ 1.18
NDUFA3-204ENST00000391764 PRDM11Q9NQV5 511 aa22.43■■□□□ 1.18
NDUFA3-204ENST00000391764 OVOS2A0A0J9YW53 1432 aa22.42■■□□□ 1.18
NDUFA3-204ENST00000391764 OVOS2Q6IE36 1432 aa22.42■■□□□ 1.18
NDUFA3-204ENST00000391764 NSD3Q9BZ95 1437 aa22.42■■□□□ 1.18
NDUFA3-204ENST00000391764 SOX12O15370 315 aa22.42■■□□□ 1.18
NDUFA3-204ENST00000391764 CHRNA2Q15822 529 aa22.42■■□□□ 1.18
NDUFA3-204ENST00000391764 CPDO75976 1380 aa22.41■■□□□ 1.18
NDUFA3-204ENST00000391764 QTRT2Q9H974 415 aaKnown RBP22.41■■□□□ 1.18
NDUFA3-204ENST00000391764 COL18A1P39060 1754 aa22.4■■□□□ 1.18
NDUFA3-204ENST00000391764 RGPD5Q99666 1765 aa22.4■■□□□ 1.18
NDUFA3-204ENST00000391764 KIF7Q2M1P5 1343 aa22.4■■□□□ 1.18
NDUFA3-204ENST00000391764 ZBTB7CA1YPR0 619 aa22.4■■□□□ 1.18
NDUFA3-204ENST00000391764 TRPC5Q9UL62 973 aaPredicted RBP22.4■■□□□ 1.18
NDUFA3-204ENST00000391764 GLI3P10071 1580 aa22.4■■□□□ 1.18
NDUFA3-204ENST00000391764 UNC5CLQ8IV45 518 aa22.39■■□□□ 1.17
NDUFA3-204ENST00000391764 BTG4Q9NY30 223 aa22.39■■□□□ 1.17
NDUFA3-204ENST00000391764 CAMTA1Q9Y6Y1 1673 aa22.38■■□□□ 1.17
NDUFA3-204ENST00000391764 ANKRD26Q9UPS8 1709 aa22.37■■□□□ 1.17
NDUFA3-204ENST00000391764 RXRBP28702 533 aa22.37■■□□□ 1.17
NDUFA3-204ENST00000391764 CARD14Q9BXL6 1004 aa22.37■■□□□ 1.17
NDUFA3-204ENST00000391764 RGS12O14924 1447 aa22.35■■□□□ 1.17
NDUFA3-204ENST00000391764 KCNH5Q8NCM2 988 aa22.35■■□□□ 1.17
NDUFA3-204ENST00000391764 RBM6P78332 1123 aaKnown RBP22.34■■□□□ 1.17
NDUFA3-204ENST00000391764 GGNBP2Q9H3C7 697 aa22.33■■□□□ 1.17
NDUFA3-204ENST00000391764 CCDC7Q96M83 1385 aa22.33■■□□□ 1.17
NDUFA3-204ENST00000391764 CDK12Q9NYV4 1490 aaPredicted RBP22.33■■□□□ 1.16
NDUFA3-204ENST00000391764 COG3Q96JB2 828 aa22.32■■□□□ 1.16
NDUFA3-204ENST00000391764 STRN4Q9NRL3 753 aa22.32■■□□□ 1.16
NDUFA3-204ENST00000391764 CCDC9Q9Y3X0 531 aaKnown RBP22.32■■□□□ 1.16
NDUFA3-204ENST00000391764 COL5A2P05997 1499 aaPredicted RBP22.31■■□□□ 1.16
NDUFA3-204ENST00000391764 AATKQ6ZMQ8 1374 aa22.31■■□□□ 1.16
NDUFA3-204ENST00000391764 FYB1O15117 783 aa22.31■■□□□ 1.16
NDUFA3-204ENST00000391764 VPS72Q15906 364 aa22.31■■□□□ 1.16
NDUFA3-204ENST00000391764 GJD4Q96KN9 370 aaPredicted RBP22.31■■□□□ 1.16
NDUFA3-204ENST00000391764 ABCC6O95255 1503 aa22.31■■□□□ 1.16
NDUFA3-204ENST00000391764 ARHGEF25Q86VW2 580 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms