RNA–Protein interactions for RNA: ENST00000390971.1

SNORA40.4-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.4-201ENST00000390971 ZNF511Q8NB15 262 aa12.63□□□□□ -0.39
SNORA40.4-201ENST00000390971 FKBPLQ9UIM3 349 aa12.63□□□□□ -0.39
SNORA40.4-201ENST00000390971 SKOR1P84550 965 aa12.62□□□□□ -0.39
SNORA40.4-201ENST00000390971 FOXC1Q12948 553 aa12.62□□□□□ -0.39
SNORA40.4-201ENST00000390971 RC3H1Q5TC82 1133 aaKnown RBP12.62□□□□□ -0.39
SNORA40.4-201ENST00000390971 GPKOWQ92917 476 aaPredicted RBP eCLIP12.62□□□□□ -0.39
SNORA40.4-201ENST00000390971 WNT7AO00755 349 aa12.61□□□□□ -0.39
SNORA40.4-201ENST00000390971 EPS8L1Q8TE68 723 aa12.61□□□□□ -0.39
SNORA40.4-201ENST00000390971 TRIM34Q9BYJ4 488 aa12.61□□□□□ -0.39
SNORA40.4-201ENST00000390971 ZC3H4Q9UPT8 1303 aaKnown RBP12.61□□□□□ -0.39
SNORA40.4-201ENST00000390971 GDF9O60383 454 aa12.6□□□□□ -0.39
SNORA40.4-201ENST00000390971 MTMR14Q8NCE2 650 aa12.6□□□□□ -0.39
SNORA40.4-201ENST00000390971 PKD2L1Q9P0L9 805 aa12.6□□□□□ -0.39
SNORA40.4-201ENST00000390971 PDZRN3Q9UPQ7 1066 aa12.6□□□□□ -0.39
SNORA40.4-201ENST00000390971 PRR20EP86478 221 aa12.59□□□□□ -0.39
SNORA40.4-201ENST00000390971 PRR20CP86479 221 aa12.59□□□□□ -0.39
SNORA40.4-201ENST00000390971 PRR20DP86480 221 aa12.59□□□□□ -0.39
SNORA40.4-201ENST00000390971 PRR20BP86481 221 aa12.59□□□□□ -0.39
SNORA40.4-201ENST00000390971 PRR20AP86496 221 aa12.59□□□□□ -0.39
SNORA40.4-201ENST00000390971 GJD4Q96KN9 370 aaPredicted RBP12.59□□□□□ -0.39
SNORA40.4-201ENST00000390971 IRX2Q9BZI1 471 aaPredicted RBP12.58□□□□□ -0.4
SNORA40.4-201ENST00000390971 PRM3Q9NNZ6 103 aa12.58□□□□□ -0.4
SNORA40.4-201ENST00000390971 AGERQ15109 404 aa12.57□□□□□ -0.4
SNORA40.4-201ENST00000390971 PDXDC2PQ6P474 469 aa12.57□□□□□ -0.4
SNORA40.4-201ENST00000390971 TRIM67Q6ZTA4 783 aa12.57□□□□□ -0.4
SNORA40.4-201ENST00000390971 BPHLQ86WA6 291 aaPredicted RBP12.57□□□□□ -0.4
SNORA40.4-201ENST00000390971 EHBP1Q8NDI1 1231 aa12.57□□□□□ -0.4
SNORA40.4-201ENST00000390971 GFRA3O60609 400 aa12.56□□□□□ -0.4
SNORA40.4-201ENST00000390971 FLIIQ13045 1269 aa12.56□□□□□ -0.4
SNORA40.4-201ENST00000390971 LAPTM4AQ15012 233 aa12.56□□□□□ -0.4
SNORA40.4-201ENST00000390971 MRGPRX2Q96LB1 330 aa12.56□□□□□ -0.4
SNORA40.4-201ENST00000390971 TNFRSF10AO00220 468 aa12.55□□□□□ -0.4
SNORA40.4-201ENST00000390971 VARSP26640 1264 aaKnown RBP12.55□□□□□ -0.4
SNORA40.4-201ENST00000390971 FOXJ1Q92949 421 aa12.55□□□□□ -0.4
SNORA40.4-201ENST00000390971 MCM6Q14566 821 aa12.54□□□□□ -0.4
SNORA40.4-201ENST00000390971 GPSM3Q9Y4H4 160 aa12.54□□□□□ -0.4
SNORA40.4-201ENST00000390971 NDUFB9Q9Y6M9 179 aa12.54□□□□□ -0.4
SNORA40.4-201ENST00000390971 PTK2Q05397 1052 aa12.53□□□□□ -0.4
SNORA40.4-201ENST00000390971 SH3BP5LQ7L8J4 393 aa12.53□□□□□ -0.4
SNORA40.4-201ENST00000390971 CYP4X1Q8N118 509 aa12.53□□□□□ -0.4
SNORA40.4-201ENST00000390971 SNIP1Q8TAD8 396 aaKnown RBP12.52□□□□□ -0.41
SNORA40.4-201ENST00000390971 NRG2O14511 850 aaPredicted RBP12.51□□□□□ -0.41
SNORA40.4-201ENST00000390971 SH3RF1Q7Z6J0 888 aa12.51□□□□□ -0.41
SNORA40.4-201ENST00000390971 FAM174AQ8TBP5 190 aa12.51□□□□□ -0.41
SNORA40.4-201ENST00000390971 ARHGAP9Q9BRR9 750 aa12.51□□□□□ -0.41
SNORA40.4-201ENST00000390971 TTC24A2A3L6 582 aaPredicted RBP12.5□□□□□ -0.41
SNORA40.4-201ENST00000390971 SIAH2O43255 324 aa12.5□□□□□ -0.41
SNORA40.4-201ENST00000390971 TOR4AQ9NXH8 423 aa12.5□□□□□ -0.41
SNORA40.4-201ENST00000390971 C4orf48Q5BLP8 95 aa12.49□□□□□ -0.41
SNORA40.4-201ENST00000390971 MAGEB6P1A0A0J9YX57 407 aa12.48□□□□□ -0.41
SNORA40.4-201ENST00000390971 ZBTB33Q86T24 672 aa12.48□□□□□ -0.41
SNORA40.4-201ENST00000390971 MPNDQ8N594 471 aa12.48□□□□□ -0.41
SNORA40.4-201ENST00000390971 C1QTNF2Q9BXJ5 285 aa12.46□□□□□ -0.41
SNORA40.4-201ENST00000390971 CARD14Q9BXL6 1004 aa12.46□□□□□ -0.41
SNORA40.4-201ENST00000390971 TBC1D2BQ9UPU7 963 aa12.46□□□□□ -0.41
SNORA40.4-201ENST00000390971 ZBBXA8MT70 800 aa12.44□□□□□ -0.42
SNORA40.4-201ENST00000390971 ALDH1A1P00352 501 aa12.44□□□□□ -0.42
SNORA40.4-201ENST00000390971 ERFEQ4G0M1 354 aa12.43□□□□□ -0.42
SNORA40.4-201ENST00000390971 TRMT44Q8IYL2 757 aaKnown RBP12.43□□□□□ -0.42
SNORA40.4-201ENST00000390971 ADAM32Q8TC27 787 aa12.43□□□□□ -0.42
SNORA40.4-201ENST00000390971 CDK15Q96Q40 435 aa12.43□□□□□ -0.42
SNORA40.4-201ENST00000390971 OCSTAMPQ9BR26 566 aa12.43□□□□□ -0.42
SNORA40.4-201ENST00000390971 GDPD2Q9HCC8 539 aa12.43□□□□□ -0.42
SNORA40.4-201ENST00000390971 RAD21O60216 631 aa12.42□□□□□ -0.42
SNORA40.4-201ENST00000390971 DGAT1O75907 488 aa12.42□□□□□ -0.42
SNORA40.4-201ENST00000390971 UBTFP17480 764 aaKnown RBP12.42□□□□□ -0.42
SNORA40.4-201ENST00000390971 FAM187AA6NFU0 413 aa12.41□□□□□ -0.42
SNORA40.4-201ENST00000390971 J3QL48 77 aa12.41□□□□□ -0.42
SNORA40.4-201ENST00000390971 GPR37L1O60883 481 aa12.41□□□□□ -0.42
SNORA40.4-201ENST00000390971 NR1H3Q13133 447 aa12.41□□□□□ -0.42
SNORA40.4-201ENST00000390971 ARID5BQ14865 1188 aa12.41□□□□□ -0.42
SNORA40.4-201ENST00000390971 PKDCCQ504Y2 493 aa12.41□□□□□ -0.42
SNORA40.4-201ENST00000390971 GTF3C3Q9Y5Q9 886 aa12.41□□□□□ -0.42
SNORA40.4-201ENST00000390971 WASF2Q9Y6W5 498 aa12.41□□□□□ -0.42
SNORA40.4-201ENST00000390971 FBXO45P0C2W1 286 aa12.4□□□□□ -0.42
SNORA40.4-201ENST00000390971 SMPD1P17405 629 aa12.4□□□□□ -0.42
SNORA40.4-201ENST00000390971 ABL2P42684 1182 aa12.4□□□□□ -0.42
SNORA40.4-201ENST00000390971 COG6Q9Y2V7 657 aa12.4□□□□□ -0.42
SNORA40.4-201ENST00000390971 TLL2Q9Y6L7 1015 aa12.4□□□□□ -0.42
SNORA40.4-201ENST00000390971 CDV3Q9UKY7 258 aaKnown RBP12.39□□□□□ -0.43
SNORA40.4-201ENST00000390971 ZNF330Q9Y3S2 320 aaPredicted RBP12.39□□□□□ -0.43
SNORA40.4-201ENST00000390971 SLC10A4Q96EP9 437 aa12.38□□□□□ -0.43
SNORA40.4-201ENST00000390971 MAP4K5Q9Y4K4 846 aa12.38□□□□□ -0.43
SNORA40.4-201ENST00000390971 IRF5Q13568 498 aa12.37□□□□□ -0.43
SNORA40.4-201ENST00000390971 VASH1Q7L8A9 365 aaPredicted RBP12.37□□□□□ -0.43
SNORA40.4-201ENST00000390971 DZIP3Q86Y13 1208 aaKnown RBP12.37□□□□□ -0.43
SNORA40.4-201ENST00000390971 WWC1Q8IX03 1113 aa12.37□□□□□ -0.43
SNORA40.4-201ENST00000390971 ADH1CP00326 375 aa12.36□□□□□ -0.43
SNORA40.4-201ENST00000390971 MCCD1P59942 119 aaPredicted RBP12.36□□□□□ -0.43
SNORA40.4-201ENST00000390971 WASHC4Q2M389 1173 aa12.36□□□□□ -0.43
SNORA40.4-201ENST00000390971 ZNF592Q92610 1267 aa12.36□□□□□ -0.43
SNORA40.4-201ENST00000390971 GRM5P41594 1212 aa12.35□□□□□ -0.43
SNORA40.4-201ENST00000390971 NR5A1Q13285 461 aa12.35□□□□□ -0.43
SNORA40.4-201ENST00000390971 Q6ZNB5 142 aa12.35□□□□□ -0.43
SNORA40.4-201ENST00000390971 POM121Q96HA1 1249 aa12.35□□□□□ -0.43
SNORA40.4-201ENST00000390971 PCDHB9Q9Y5E1 797 aa12.34□□□□□ -0.43
SNORA40.4-201ENST00000390971 AVPP01185 164 aa12.32□□□□□ -0.44
SNORA40.4-201ENST00000390971 NBPF20Q3BBV1 942 aa12.32□□□□□ -0.44
SNORA40.4-201ENST00000390971 KCTD15Q96SI1 283 aaPredicted RBP12.32□□□□□ -0.44
SNORA40.4-201ENST00000390971 EIF4G2P78344 907 aaKnown RBP eCLIP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms