RNA–Protein interactions for RNA: ENST00000390624.3

IGHV3-48-201, Transcript of immunoglobulin heavy variable 3-48, humanhuman

APPRIS P1 BASIC

Gene IGHV3-48, Length 432 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-48-201ENST00000390624 RBM6P78332 1123 aaKnown RBP20.08■□□□□ 0.81
IGHV3-48-201ENST00000390624 CABP1Q9NZU7 370 aa20.08■□□□□ 0.81
IGHV3-48-201ENST00000390624 TRPC5Q9UL62 973 aaPredicted RBP20.07■□□□□ 0.8
IGHV3-48-201ENST00000390624 SBNO2Q9Y2G9 1366 aa20.06■□□□□ 0.8
IGHV3-48-201ENST00000390624 BCL9LQ86UU0 1499 aa20.05■□□□□ 0.8
IGHV3-48-201ENST00000390624 CCER1Q8TC90 406 aaPredicted RBP20.04■□□□□ 0.8
IGHV3-48-201ENST00000390624 CDK12Q9NYV4 1490 aaPredicted RBP20.04■□□□□ 0.8
IGHV3-48-201ENST00000390624 ABCA3Q99758 1704 aa20.03■□□□□ 0.8
IGHV3-48-201ENST00000390624 UNC5CLQ8IV45 518 aa20.02■□□□□ 0.8
IGHV3-48-201ENST00000390624 ABTB2Q8N961 1025 aa20.02■□□□□ 0.8
IGHV3-48-201ENST00000390624 BRD4O60885 1362 aaPredicted RBP20.02■□□□□ 0.8
IGHV3-48-201ENST00000390624 SLIT2O94813 1529 aa20.02■□□□□ 0.79
IGHV3-48-201ENST00000390624 ATAD2Q6PL18 1390 aa20.01■□□□□ 0.79
IGHV3-48-201ENST00000390624 FAM83GA6ND36 823 aa20.01■□□□□ 0.79
IGHV3-48-201ENST00000390624 ATRNO75882 1429 aa20.01■□□□□ 0.79
IGHV3-48-201ENST00000390624 SLC24A1O60721 1099 aa20■□□□□ 0.79
IGHV3-48-201ENST00000390624 ZNF692Q9BU19 519 aaPredicted RBP20■□□□□ 0.79
IGHV3-48-201ENST00000390624 ST20-MTHFSA0A0A6YYL1 179 aa19.99■□□□□ 0.79
IGHV3-48-201ENST00000390624 NUTM2GQ5VZR2 741 aa19.99■□□□□ 0.79
IGHV3-48-201ENST00000390624 NLRP13Q86W25 1043 aa19.98■□□□□ 0.79
IGHV3-48-201ENST00000390624 GJD4Q96KN9 370 aaPredicted RBP19.98■□□□□ 0.79
IGHV3-48-201ENST00000390624 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.98■□□□□ 0.79
IGHV3-48-201ENST00000390624 CRYBG1Q9Y4K1 1723 aa19.97■□□□□ 0.79
IGHV3-48-201ENST00000390624 USP6P35125 1406 aa19.97■□□□□ 0.79
IGHV3-48-201ENST00000390624 PUS7Q96PZ0 661 aaKnown RBP19.97■□□□□ 0.79
IGHV3-48-201ENST00000390624 NWD2Q9ULI1 1742 aa19.96■□□□□ 0.79
IGHV3-48-201ENST00000390624 PLCH1Q4KWH8 1693 aa19.95■□□□□ 0.78
IGHV3-48-201ENST00000390624 TESK2Q96S53 571 aa19.95■□□□□ 0.78
IGHV3-48-201ENST00000390624 BTG4Q9NY30 223 aa19.95■□□□□ 0.78
IGHV3-48-201ENST00000390624 RGS12O14924 1447 aa19.94■□□□□ 0.78
IGHV3-48-201ENST00000390624 VPS72Q15906 364 aa19.94■□□□□ 0.78
IGHV3-48-201ENST00000390624 PRDM11Q9NQV5 511 aa19.94■□□□□ 0.78
IGHV3-48-201ENST00000390624 COL14A1Q05707 1796 aaKnown RBP19.93■□□□□ 0.78
IGHV3-48-201ENST00000390624 ZC3H6P61129 1189 aaKnown RBP19.93■□□□□ 0.78
IGHV3-48-201ENST00000390624 CPSF1Q10570 1443 aaKnown RBP19.93■□□□□ 0.78
IGHV3-48-201ENST00000390624 SSH2Q76I76 1423 aa19.93■□□□□ 0.78
IGHV3-48-201ENST00000390624 PHRF1Q9P1Y6 1649 aaKnown RBP19.92■□□□□ 0.78
IGHV3-48-201ENST00000390624 NLRP6P59044 892 aa19.92■□□□□ 0.78
IGHV3-48-201ENST00000390624 TMC1Q8TDI8 760 aa19.92■□□□□ 0.78
IGHV3-48-201ENST00000390624 USP19O94966 1318 aa19.92■□□□□ 0.78
IGHV3-48-201ENST00000390624 AKAP12Q02952 1782 aa19.92■□□□□ 0.78
IGHV3-48-201ENST00000390624 USP47Q96K76 1375 aa19.92■□□□□ 0.78
IGHV3-48-201ENST00000390624 GCP02774 474 aa19.91■□□□□ 0.78
IGHV3-48-201ENST00000390624 CCDC9Q9Y3X0 531 aaKnown RBP19.91■□□□□ 0.78
IGHV3-48-201ENST00000390624 TTC21BQ7Z4L5 1316 aa19.91■□□□□ 0.78
IGHV3-48-201ENST00000390624 KTN1Q86UP2 1357 aaKnown RBP19.91■□□□□ 0.78
IGHV3-48-201ENST00000390624 KIAA0232Q92628 1395 aa19.91■□□□□ 0.78
IGHV3-48-201ENST00000390624 SLC12A5Q9H2X9 1139 aa19.9■□□□□ 0.78
IGHV3-48-201ENST00000390624 CHRNA2Q15822 529 aa19.89■□□□□ 0.77
IGHV3-48-201ENST00000390624 TTC21AQ8NDW8 1320 aa19.89■□□□□ 0.77
IGHV3-48-201ENST00000390624 TMF1P82094 1093 aa19.88■□□□□ 0.77
IGHV3-48-201ENST00000390624 HDGFL2Q7Z4V5 671 aaPredicted RBP19.88■□□□□ 0.77
IGHV3-48-201ENST00000390624 UPF1Q92900 1129 aaKnown RBP eCLIP19.88■□□□□ 0.77
IGHV3-48-201ENST00000390624 GLI3P10071 1580 aa19.87■□□□□ 0.77
IGHV3-48-201ENST00000390624 TERF2IPQ9NYB0 399 aa19.87■□□□□ 0.77
IGHV3-48-201ENST00000390624 NRAPQ86VF7 1730 aa19.87■□□□□ 0.77
IGHV3-48-201ENST00000390624 CPDO75976 1380 aa19.86■□□□□ 0.77
IGHV3-48-201ENST00000390624 ONECUT3O60422 494 aaPredicted RBP19.86■□□□□ 0.77
IGHV3-48-201ENST00000390624 NRKQ7Z2Y5 1582 aa19.86■□□□□ 0.77
IGHV3-48-201ENST00000390624 PIK3C2AO00443 1686 aa19.85■□□□□ 0.77
IGHV3-48-201ENST00000390624 CD163L1Q9NR16 1453 aa19.85■□□□□ 0.77
IGHV3-48-201ENST00000390624 MON2Q7Z3U7 1717 aa19.85■□□□□ 0.77
IGHV3-48-201ENST00000390624 NINLQ9Y2I6 1382 aa19.84■□□□□ 0.77
IGHV3-48-201ENST00000390624 EVA1CP58658 441 aa19.83■□□□□ 0.77
IGHV3-48-201ENST00000390624 CDCA8Q53HL2 280 aa19.83■□□□□ 0.77
IGHV3-48-201ENST00000390624 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.83■□□□□ 0.77
IGHV3-48-201ENST00000390624 KCNH5Q8NCM2 988 aa19.83■□□□□ 0.77
IGHV3-48-201ENST00000390624 SLIT3O75094 1523 aa19.82■□□□□ 0.76
IGHV3-48-201ENST00000390624 SPATA31A5Q5VU36 1347 aa19.82■□□□□ 0.76
IGHV3-48-201ENST00000390624 SPATA31A7Q8IWB4 1347 aa19.82■□□□□ 0.76
IGHV3-48-201ENST00000390624 SEPT12Q8IYM1 358 aa19.82■□□□□ 0.76
IGHV3-48-201ENST00000390624 STRN4Q9NRL3 753 aa19.82■□□□□ 0.76
IGHV3-48-201ENST00000390624 A0A1W2PP64 1363 aa19.81■□□□□ 0.76
IGHV3-48-201ENST00000390624 EDC4Q6P2E9 1401 aaKnown RBP19.8■□□□□ 0.76
IGHV3-48-201ENST00000390624 FAM98CQ17RN3 349 aaKnown RBP19.8■□□□□ 0.76
IGHV3-48-201ENST00000390624 CAMTA1Q9Y6Y1 1673 aa19.8■□□□□ 0.76
IGHV3-48-201ENST00000390624 ZBTB7CA1YPR0 619 aa19.79■□□□□ 0.76
IGHV3-48-201ENST00000390624 NME9Q86XW9 330 aa19.78■□□□□ 0.76
IGHV3-48-201ENST00000390624 AATKQ6ZMQ8 1374 aa19.78■□□□□ 0.76
IGHV3-48-201ENST00000390624 USP31Q70CQ4 1352 aa19.78■□□□□ 0.76
IGHV3-48-201ENST00000390624 LMO7Q8WWI1 1683 aa19.78■□□□□ 0.76
IGHV3-48-201ENST00000390624 SPATA31A1Q5TZJ5 1347 aa19.77■□□□□ 0.76
IGHV3-48-201ENST00000390624 EP400Q96L91 3159 aa19.77■□□□□ 0.76
IGHV3-48-201ENST00000390624 BRWD3Q6RI45 1802 aa19.77■□□□□ 0.76
IGHV3-48-201ENST00000390624 A0A0G2JS52 829 aa19.77■□□□□ 0.76
IGHV3-48-201ENST00000390624 EIF4G2P78344 907 aaKnown RBP eCLIP19.77■□□□□ 0.76
IGHV3-48-201ENST00000390624 MYT1Q01538 1121 aa19.77■□□□□ 0.76
IGHV3-48-201ENST00000390624 ARHGEF25Q86VW2 580 aa19.77■□□□□ 0.76
IGHV3-48-201ENST00000390624 ZRANB1Q9UGI0 708 aa19.77■□□□□ 0.76
IGHV3-48-201ENST00000390624 SOX12O15370 315 aa19.76■□□□□ 0.75
IGHV3-48-201ENST00000390624 KRT27Q7Z3Y8 459 aa19.76■□□□□ 0.75
IGHV3-48-201ENST00000390624 LARP1Q6PKG0 1096 aaKnown RBP19.75■□□□□ 0.75
IGHV3-48-201ENST00000390624 ANKRD36BQ8N2N9 1353 aa19.74■□□□□ 0.75
IGHV3-48-201ENST00000390624 CCDC125Q86Z20 511 aa19.74■□□□□ 0.75
IGHV3-48-201ENST00000390624 USP35Q9P2H5 1018 aa19.74■□□□□ 0.75
IGHV3-48-201ENST00000390624 USP54Q70EL1 1684 aa19.73■□□□□ 0.75
IGHV3-48-201ENST00000390624 COL5A2P05997 1499 aaPredicted RBP19.73■□□□□ 0.75
IGHV3-48-201ENST00000390624 COL18A1P39060 1754 aa19.72■□□□□ 0.75
IGHV3-48-201ENST00000390624 BARGINQ6ZT62 677 aa19.72■□□□□ 0.75
IGHV3-48-201ENST00000390624 AXIN2Q9Y2T1 843 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms