RNA–Protein interactions for RNA: ENST00000390454.2

TRAV25-201, Transcript of T cell receptor alpha variable 25, humanhuman

APPRIS P1 BASIC

Gene TRAV25, Length 403 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25-201ENST00000390454 PCDHGC3Q9UN70 934 aa8.75□□□□□ -1.01
TRAV25-201ENST00000390454 PEG3Q9GZU2 1588 aa8.74□□□□□ -1.01
TRAV25-201ENST00000390454 USP17L3A6NCW0 530 aa8.74□□□□□ -1.01
TRAV25-201ENST00000390454 USP17L4A6NCW7 530 aa8.74□□□□□ -1.01
TRAV25-201ENST00000390454 NR6A1Q15406 480 aa8.74□□□□□ -1.01
TRAV25-201ENST00000390454 USP17L2Q6R6M4 530 aa8.74□□□□□ -1.01
TRAV25-201ENST00000390454 USP17L1Q7RTZ2 530 aa8.74□□□□□ -1.01
TRAV25-201ENST00000390454 FAM198AQ9UFP1 575 aa8.74□□□□□ -1.01
TRAV25-201ENST00000390454 RUSC2Q8N2Y8 1516 aa8.74□□□□□ -1.01
TRAV25-201ENST00000390454 PPM1GO15355 546 aaPredicted RBP8.73□□□□□ -1.01
TRAV25-201ENST00000390454 SKIP12755 728 aa8.73□□□□□ -1.01
TRAV25-201ENST00000390454 NR1H3Q13133 447 aa8.73□□□□□ -1.01
TRAV25-201ENST00000390454 GRIPAP1Q4V328 841 aa8.73□□□□□ -1.01
TRAV25-201ENST00000390454 PACS2Q86VP3 889 aa8.73□□□□□ -1.01
TRAV25-201ENST00000390454 FAM200AQ8TCP9 573 aa8.73□□□□□ -1.01
TRAV25-201ENST00000390454 CLP1Q92989 425 aaKnown RBP8.73□□□□□ -1.01
TRAV25-201ENST00000390454 KDM4FA0A1W2PPD8 638 aa8.72□□□□□ -1.01
TRAV25-201ENST00000390454 ANKRD33BA6NCL7 494 aa8.72□□□□□ -1.01
TRAV25-201ENST00000390454 USP17L15C9J2P7 530 aa8.72□□□□□ -1.01
TRAV25-201ENST00000390454 USP17L10C9JJH3 530 aa8.72□□□□□ -1.01
TRAV25-201ENST00000390454 USP17L13C9JLJ4 530 aa8.72□□□□□ -1.01
TRAV25-201ENST00000390454 USP17L12C9JPN9 530 aa8.72□□□□□ -1.01
TRAV25-201ENST00000390454 USP17L11C9JVI0 530 aa8.72□□□□□ -1.01
TRAV25-201ENST00000390454 USP17L21D6R901 530 aa8.72□□□□□ -1.01
TRAV25-201ENST00000390454 USP17L18D6R9N7 530 aa8.72□□□□□ -1.01
TRAV25-201ENST00000390454 USP17L22D6RA61 530 aa8.72□□□□□ -1.01
TRAV25-201ENST00000390454 USP17L17D6RBQ6 530 aa8.72□□□□□ -1.01
TRAV25-201ENST00000390454 USP17L19D6RCP7 530 aa8.72□□□□□ -1.01
TRAV25-201ENST00000390454 CFAP99D6REC4 459 aa8.72□□□□□ -1.01
TRAV25-201ENST00000390454 USP17L20D6RJB6 530 aa8.72□□□□□ -1.01
TRAV25-201ENST00000390454 VAMP1P23763 118 aa8.72□□□□□ -1.01
TRAV25-201ENST00000390454 ZC3H6P61129 1189 aaKnown RBP8.72□□□□□ -1.01
TRAV25-201ENST00000390454 GUCA2AQ02747 115 aa8.72□□□□□ -1.01
TRAV25-201ENST00000390454 USP17L24Q0WX57 530 aa8.72□□□□□ -1.01
TRAV25-201ENST00000390454 PLEKHM2Q8IWE5 1019 aa8.72□□□□□ -1.01
TRAV25-201ENST00000390454 TATDN2Q93075 761 aa8.72□□□□□ -1.01
TRAV25-201ENST00000390454 ATP2B4P23634 1241 aa8.71□□□□□ -1.02
TRAV25-201ENST00000390454 SERPINB4P48594 390 aa8.71□□□□□ -1.02
TRAV25-201ENST00000390454 TSKSQ9UJT2 592 aa8.71□□□□□ -1.02
TRAV25-201ENST00000390454 USP17L5A8MUK1 530 aa8.7□□□□□ -1.02
TRAV25-201ENST00000390454 SF3A1Q15459 793 aaKnown RBP8.7□□□□□ -1.02
TRAV25-201ENST00000390454 UBXN4Q92575 508 aa8.7□□□□□ -1.02
TRAV25-201ENST00000390454 CDCA7Q9BWT1 371 aaPredicted RBP8.7□□□□□ -1.02
TRAV25-201ENST00000390454 MKRN1Q9UHC7 482 aaKnown RBP8.7□□□□□ -1.02
TRAV25-201ENST00000390454 RASA1P20936 1047 aa8.69□□□□□ -1.02
TRAV25-201ENST00000390454 NPAS4Q8IUM7 802 aa8.69□□□□□ -1.02
TRAV25-201ENST00000390454 ATP5J2-PTCD1G3V325 749 aa8.68□□□□□ -1.02
TRAV25-201ENST00000390454 PIK3CDO00329 1044 aa8.68□□□□□ -1.02
TRAV25-201ENST00000390454 NOM1Q5C9Z4 860 aaKnown RBP8.68□□□□□ -1.02
TRAV25-201ENST00000390454 PPP1R1BQ9UD71 204 aaPredicted RBP8.68□□□□□ -1.02
TRAV25-201ENST00000390454 DHX57Q6P158 1386 aaKnown RBP8.68□□□□□ -1.02
TRAV25-201ENST00000390454 ERICH3Q5RHP9 1530 aa8.68□□□□□ -1.02
TRAV25-201ENST00000390454 ZBBXA8MT70 800 aa8.67□□□□□ -1.02
TRAV25-201ENST00000390454 CUX2O14529 1486 aa8.67□□□□□ -1.02
TRAV25-201ENST00000390454 EIF5BO60841 1220 aaKnown RBP8.67□□□□□ -1.02
TRAV25-201ENST00000390454 NCLP19338 710 aaKnown RBP8.67□□□□□ -1.02
TRAV25-201ENST00000390454 SLC4A3P48751 1232 aa8.67□□□□□ -1.02
TRAV25-201ENST00000390454 SWI5Q1ZZU3 235 aa8.67□□□□□ -1.02
TRAV25-201ENST00000390454 ZNF592Q92610 1267 aa8.67□□□□□ -1.02
TRAV25-201ENST00000390454 HLA-CQ95604 372 aa8.67□□□□□ -1.02
TRAV25-201ENST00000390454 SPATA32Q96LK8 384 aa8.67□□□□□ -1.02
TRAV25-201ENST00000390454 SUPT16HQ9Y5B9 1047 aaKnown RBP8.67□□□□□ -1.02
TRAV25-201ENST00000390454 SYNJ1O43426 1573 aa8.66□□□□□ -1.02
TRAV25-201ENST00000390454 POTEMA6NI47 508 aa8.66□□□□□ -1.02
TRAV25-201ENST00000390454 TRIM6-TRIM34B2RNG4 842 aa8.66□□□□□ -1.02
TRAV25-201ENST00000390454 PPP1R3GB7ZBB8 358 aa8.66□□□□□ -1.02
TRAV25-201ENST00000390454 SMARCA5O60264 1052 aaPredicted RBP8.66□□□□□ -1.02
TRAV25-201ENST00000390454 COL9A1P20849 921 aa8.66□□□□□ -1.02
TRAV25-201ENST00000390454 PTK7Q13308 1070 aa8.66□□□□□ -1.02
TRAV25-201ENST00000390454 CRTC2Q53ET0 693 aaPredicted RBP8.66□□□□□ -1.02
TRAV25-201ENST00000390454 MAMSTRQ6ZN01 415 aa8.66□□□□□ -1.02
TRAV25-201ENST00000390454 DEPDC4Q8N2C3 294 aa8.66□□□□□ -1.02
TRAV25-201ENST00000390454 LZTS3O60299 673 aaPredicted RBP8.65□□□□□ -1.02
TRAV25-201ENST00000390454 FBXO45P0C2W1 286 aa8.65□□□□□ -1.02
TRAV25-201ENST00000390454 ANKMY2Q8IV38 441 aa8.65□□□□□ -1.02
TRAV25-201ENST00000390454 RRBP1Q9P2E9 1410 aaKnown RBP8.64□□□□□ -1.03
TRAV25-201ENST00000390454 NUDT7P0C024 238 aa8.64□□□□□ -1.03
TRAV25-201ENST00000390454 PTPREP23469 700 aa8.64□□□□□ -1.03
TRAV25-201ENST00000390454 SLFNL1Q499Z3 407 aa8.64□□□□□ -1.03
TRAV25-201ENST00000390454 NAALADL2Q58DX5 795 aa8.64□□□□□ -1.03
TRAV25-201ENST00000390454 PPP4R3BQ5MIZ7 849 aa8.64□□□□□ -1.03
TRAV25-201ENST00000390454 EGFL7Q9UHF1 273 aa8.64□□□□□ -1.03
TRAV25-201ENST00000390454 RAPGEF2Q9Y4G8 1499 aa8.64□□□□□ -1.03
TRAV25-201ENST00000390454 ABL1P00519 1130 aa8.63□□□□□ -1.03
TRAV25-201ENST00000390454 FAM69CQ0P6D2 419 aa8.63□□□□□ -1.03
TRAV25-201ENST00000390454 POTEGQ6S5H5 508 aa8.63□□□□□ -1.03
TRAV25-201ENST00000390454 ZSCAN29Q8IWY8 852 aaPredicted RBP8.63□□□□□ -1.03
TRAV25-201ENST00000390454 C1orf216Q8TAB5 229 aa8.63□□□□□ -1.03
TRAV25-201ENST00000390454 ANP32EQ9BTT0 268 aa8.63□□□□□ -1.03
TRAV25-201ENST00000390454 SLAIN2Q9P270 581 aa8.63□□□□□ -1.03
TRAV25-201ENST00000390454 UNC13AQ9UPW8 1703 aa8.63□□□□□ -1.03
TRAV25-201ENST00000390454 C3orf80F5H4A9 247 aa8.62□□□□□ -1.03
TRAV25-201ENST00000390454 SMAPO00193 183 aa8.62□□□□□ -1.03
TRAV25-201ENST00000390454 MAPK1P28482 360 aa8.62□□□□□ -1.03
TRAV25-201ENST00000390454 HDGFP51858 240 aaKnown RBP8.62□□□□□ -1.03
TRAV25-201ENST00000390454 NCOA4Q13772 614 aa8.62□□□□□ -1.03
TRAV25-201ENST00000390454 CHMP4AQ9BY43 222 aa8.62□□□□□ -1.03
TRAV25-201ENST00000390454 BCL2L12Q9HB09 334 aa8.62□□□□□ -1.03
TRAV25-201ENST00000390454 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.62□□□□□ -1.03
TRAV25-201ENST00000390454 TOP2BQ02880 1626 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms