RNA–Protein interactions for RNA: ENST00000390433.1

TRAV12-1-201, Transcript of T cell receptor alpha variable 12-1, humanhuman

APPRIS P1 BASIC

Gene TRAV12-1, Length 340 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1-201ENST00000390433 ARHGEF10O15013 1369 aa10.67□□□□□ -0.7
TRAV12-1-201ENST00000390433 THSD7AQ9UPZ6 1657 aa10.67□□□□□ -0.7
TRAV12-1-201ENST00000390433 ZEB1P37275 1124 aaPredicted RBP10.67□□□□□ -0.7
TRAV12-1-201ENST00000390433 STK26Q9P289 416 aa10.67□□□□□ -0.7
TRAV12-1-201ENST00000390433 PHF8Q9UPP1 1060 aa10.67□□□□□ -0.7
TRAV12-1-201ENST00000390433 SBNO1A3KN83 1393 aa10.66□□□□□ -0.7
TRAV12-1-201ENST00000390433 COL14A1Q05707 1796 aaKnown RBP10.66□□□□□ -0.7
TRAV12-1-201ENST00000390433 RPGRIP1LQ68CZ1 1315 aa10.65□□□□□ -0.7
TRAV12-1-201ENST00000390433 PPLO60437 1756 aa10.64□□□□□ -0.71
TRAV12-1-201ENST00000390433 PDE3BQ13370 1112 aa10.63□□□□□ -0.71
TRAV12-1-201ENST00000390433 PLEKHH1Q9ULM0 1364 aa10.63□□□□□ -0.71
TRAV12-1-201ENST00000390433 IFT172Q9UG01 1749 aa10.62□□□□□ -0.71
TRAV12-1-201ENST00000390433 NRKQ7Z2Y5 1582 aa10.62□□□□□ -0.71
TRAV12-1-201ENST00000390433 NRXN1Q9ULB1 1477 aa10.61□□□□□ -0.71
TRAV12-1-201ENST00000390433 SPATA31A1Q5TZJ5 1347 aa10.61□□□□□ -0.71
TRAV12-1-201ENST00000390433 TECPR2O15040 1411 aa10.61□□□□□ -0.71
TRAV12-1-201ENST00000390433 GIGYF1O75420 1035 aaPredicted RBP10.61□□□□□ -0.71
TRAV12-1-201ENST00000390433 SIN3AQ96ST3 1273 aa10.61□□□□□ -0.71
TRAV12-1-201ENST00000390433 PMFBP1Q8TBY8 1022 aa10.6□□□□□ -0.71
TRAV12-1-201ENST00000390433 PRDM11Q9NQV5 511 aa10.6□□□□□ -0.71
TRAV12-1-201ENST00000390433 STRN4Q9NRL3 753 aa10.6□□□□□ -0.71
TRAV12-1-201ENST00000390433 KNDC1Q76NI1 1749 aa10.6□□□□□ -0.71
TRAV12-1-201ENST00000390433 ABCC11Q96J66 1382 aa10.6□□□□□ -0.71
TRAV12-1-201ENST00000390433 ZBTB7AO95365 584 aa10.59□□□□□ -0.71
TRAV12-1-201ENST00000390433 TMEM132EQ6IEE7 984 aa10.59□□□□□ -0.71
TRAV12-1-201ENST00000390433 SYT17Q9BSW7 474 aa10.59□□□□□ -0.71
TRAV12-1-201ENST00000390433 USP35Q9P2H5 1018 aa10.59□□□□□ -0.71
TRAV12-1-201ENST00000390433 MYOM1P52179 1685 aa10.59□□□□□ -0.71
TRAV12-1-201ENST00000390433 CASZ1Q86V15 1759 aa10.59□□□□□ -0.71
TRAV12-1-201ENST00000390433 FHDC1Q9C0D6 1143 aaPredicted RBP10.58□□□□□ -0.72
TRAV12-1-201ENST00000390433 ATF5Q9Y2D1 282 aaPredicted RBP10.58□□□□□ -0.72
TRAV12-1-201ENST00000390433 ADGRF5Q8IZF2 1346 aa10.58□□□□□ -0.72
TRAV12-1-201ENST00000390433 ALS2Q96Q42 1657 aa10.57□□□□□ -0.72
TRAV12-1-201ENST00000390433 PTGER2P43116 358 aa10.57□□□□□ -0.72
TRAV12-1-201ENST00000390433 PDGFDQ9GZP0 370 aaPredicted RBP10.57□□□□□ -0.72
TRAV12-1-201ENST00000390433 TRPM3Q9HCF6 1732 aaPredicted RBP10.57□□□□□ -0.72
TRAV12-1-201ENST00000390433 UTRNP46939 3433 aa10.56□□□□□ -0.72
TRAV12-1-201ENST00000390433 EVA1CP58658 441 aa10.56□□□□□ -0.72
TRAV12-1-201ENST00000390433 CHRNA2Q15822 529 aa10.56□□□□□ -0.72
TRAV12-1-201ENST00000390433 BARGINQ6ZT62 677 aa10.56□□□□□ -0.72
TRAV12-1-201ENST00000390433 STAC3Q96MF2 364 aa10.56□□□□□ -0.72
TRAV12-1-201ENST00000390433 ANO8Q9HCE9 1232 aaPredicted RBP10.56□□□□□ -0.72
TRAV12-1-201ENST00000390433 GPRASP1Q5JY77 1395 aa10.55□□□□□ -0.72
TRAV12-1-201ENST00000390433 NEUROD1Q13562 356 aa10.55□□□□□ -0.72
TRAV12-1-201ENST00000390433 SIRT1Q96EB6 747 aa10.55□□□□□ -0.72
TRAV12-1-201ENST00000390433 BCL11BQ9C0K0 894 aaPredicted RBP10.55□□□□□ -0.72
TRAV12-1-201ENST00000390433 CRYBG1Q9Y4K1 1723 aa10.55□□□□□ -0.72
TRAV12-1-201ENST00000390433 C11orf95C9JLR9 678 aaPredicted RBP10.54□□□□□ -0.72
TRAV12-1-201ENST00000390433 PLSCR1O15162 318 aa10.54□□□□□ -0.72
TRAV12-1-201ENST00000390433 PAK3O75914 559 aaPredicted RBP10.54□□□□□ -0.72
TRAV12-1-201ENST00000390433 SPATA31E1Q6ZUB1 1445 aa10.54□□□□□ -0.72
TRAV12-1-201ENST00000390433 YTHDC2Q9H6S0 1430 aaKnown RBP10.54□□□□□ -0.72
TRAV12-1-201ENST00000390433 RGPD3A6NKT7 1758 aaPredicted RBP10.54□□□□□ -0.72
TRAV12-1-201ENST00000390433 RGPD4Q7Z3J3 1758 aa10.54□□□□□ -0.72
TRAV12-1-201ENST00000390433 KIAA0232Q92628 1395 aa10.53□□□□□ -0.72
TRAV12-1-201ENST00000390433 SAFB2Q14151 953 aaKnown RBP eCLIP10.53□□□□□ -0.72
TRAV12-1-201ENST00000390433 L3MBTL2Q969R5 705 aa10.53□□□□□ -0.72
TRAV12-1-201ENST00000390433 SBF2Q86WG5 1849 aa10.53□□□□□ -0.72
TRAV12-1-201ENST00000390433 DLC1Q96QB1 1528 aa10.53□□□□□ -0.72
TRAV12-1-201ENST00000390433 TONSLQ96HA7 1378 aa10.52□□□□□ -0.72
TRAV12-1-201ENST00000390433 ZC3H6P61129 1189 aaKnown RBP10.52□□□□□ -0.73
TRAV12-1-201ENST00000390433 GPR162Q16538 588 aa10.52□□□□□ -0.73
TRAV12-1-201ENST00000390433 RGL3Q3MIN7 710 aa10.52□□□□□ -0.73
TRAV12-1-201ENST00000390433 TCP11L2Q8N4U5 519 aa10.52□□□□□ -0.73
TRAV12-1-201ENST00000390433 ANKARQ7Z5J8 1434 aa10.51□□□□□ -0.73
TRAV12-1-201ENST00000390433 SSH2Q76I76 1423 aa10.5□□□□□ -0.73
TRAV12-1-201ENST00000390433 CEP350Q5VT06 3117 aa10.5□□□□□ -0.73
TRAV12-1-201ENST00000390433 LARP1Q6PKG0 1096 aaKnown RBP10.5□□□□□ -0.73
TRAV12-1-201ENST00000390433 NGDNQ8NEJ9 315 aaKnown RBP10.5□□□□□ -0.73
TRAV12-1-201ENST00000390433 PRAM1Q96QH2 718 aa10.5□□□□□ -0.73
TRAV12-1-201ENST00000390433 MTFR1LQ9H019 292 aa10.5□□□□□ -0.73
TRAV12-1-201ENST00000390433 STK32BQ9NY57 414 aa10.5□□□□□ -0.73
TRAV12-1-201ENST00000390433 THRAP3Q9Y2W1 955 aaKnown RBP10.5□□□□□ -0.73
TRAV12-1-201ENST00000390433 PROM2Q8N271 834 aa10.49□□□□□ -0.73
TRAV12-1-201ENST00000390433 ARXQ96QS3 562 aa10.49□□□□□ -0.73
TRAV12-1-201ENST00000390433 POGKQ9P215 609 aa10.49□□□□□ -0.73
TRAV12-1-201ENST00000390433 PARP4Q9UKK3 1724 aaKnown RBP10.49□□□□□ -0.73
TRAV12-1-201ENST00000390433 OVOS2A0A0G2JMS6 1433 aa10.49□□□□□ -0.73
TRAV12-1-201ENST00000390433 OVOS2A0A0J9YW53 1432 aa10.49□□□□□ -0.73
TRAV12-1-201ENST00000390433 OVOS2Q6IE36 1432 aa10.49□□□□□ -0.73
TRAV12-1-201ENST00000390433 PHRF1Q9P1Y6 1649 aaKnown RBP10.48□□□□□ -0.73
TRAV12-1-201ENST00000390433 SLC15A2Q16348 729 aa10.48□□□□□ -0.73
TRAV12-1-201ENST00000390433 SGIP1Q9BQI5 828 aa10.48□□□□□ -0.73
TRAV12-1-201ENST00000390433 SHANK3Q9BYB0 1731 aa10.47□□□□□ -0.73
TRAV12-1-201ENST00000390433 PEAK1Q9H792 1746 aa10.47□□□□□ -0.73
TRAV12-1-201ENST00000390433 PTF1AQ7RTS3 328 aa10.47□□□□□ -0.73
TRAV12-1-201ENST00000390433 PELP1Q8IZL8 1130 aaKnown RBP10.47□□□□□ -0.73
TRAV12-1-201ENST00000390433 PIK3C2GO75747 1445 aa10.47□□□□□ -0.73
TRAV12-1-201ENST00000390433 NUTM2GQ5VZR2 741 aa10.46□□□□□ -0.73
TRAV12-1-201ENST00000390433 DCAF11Q8TEB1 546 aa10.46□□□□□ -0.73
TRAV12-1-201ENST00000390433 HIRIP3Q9BW71 556 aaPredicted RBP10.46□□□□□ -0.73
TRAV12-1-201ENST00000390433 C14orf93Q9H972 538 aaKnown RBP10.46□□□□□ -0.73
TRAV12-1-201ENST00000390433 MAP3K5Q99683 1374 aa10.46□□□□□ -0.74
TRAV12-1-201ENST00000390433 EIF3AQ14152 1382 aaKnown RBP10.45□□□□□ -0.74
TRAV12-1-201ENST00000390433 PRR36Q9H6K5 1346 aa10.45□□□□□ -0.74
TRAV12-1-201ENST00000390433 HSPA6P17066 643 aa10.45□□□□□ -0.74
TRAV12-1-201ENST00000390433 TXNRD1Q16881 649 aa10.45□□□□□ -0.74
TRAV12-1-201ENST00000390433 KLHL34Q8N239 644 aa10.45□□□□□ -0.74
TRAV12-1-201ENST00000390433 DDB1Q16531 1140 aa10.44□□□□□ -0.74
TRAV12-1-201ENST00000390433 CFAP70Q5T0N1 1121 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms