RNA–Protein interactions for RNA: ENST00000390357.3

TRBV4-1-201, Transcript of T cell receptor beta variable 4-1, humanhuman

APPRIS P1 BASIC

Gene TRBV4-1, Length 373 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1-201ENST00000390357 ACEP12821 1306 aa19.5■□□□□ 0.71
TRBV4-1-201ENST00000390357 RALGAPBQ86X10 1494 aa19.49■□□□□ 0.71
TRBV4-1-201ENST00000390357 SRPK2P78362 688 aaKnown RBP19.49■□□□□ 0.71
TRBV4-1-201ENST00000390357 NEUROD1Q13562 356 aa19.49■□□□□ 0.71
TRBV4-1-201ENST00000390357 BRD4O60885 1362 aaPredicted RBP19.48■□□□□ 0.71
TRBV4-1-201ENST00000390357 PLEKHG5O94827 1062 aa19.48■□□□□ 0.71
TRBV4-1-201ENST00000390357 CCDC9Q9Y3X0 531 aaKnown RBP19.48■□□□□ 0.71
TRBV4-1-201ENST00000390357 PLCH1Q4KWH8 1693 aa19.47■□□□□ 0.71
TRBV4-1-201ENST00000390357 BTG4Q9NY30 223 aa19.47■□□□□ 0.71
TRBV4-1-201ENST00000390357 COL14A1Q05707 1796 aaKnown RBP19.47■□□□□ 0.71
TRBV4-1-201ENST00000390357 GLI3P10071 1580 aa19.46■□□□□ 0.71
TRBV4-1-201ENST00000390357 SEPT12Q8IYM1 358 aa19.45■□□□□ 0.7
TRBV4-1-201ENST00000390357 TOPAZ1Q8N9V7 1692 aa19.45■□□□□ 0.7
TRBV4-1-201ENST00000390357 EVC2Q86UK5 1308 aa19.45■□□□□ 0.7
TRBV4-1-201ENST00000390357 ABTB2Q8N961 1025 aa19.44■□□□□ 0.7
TRBV4-1-201ENST00000390357 NLRP13Q86W25 1043 aa19.43■□□□□ 0.7
TRBV4-1-201ENST00000390357 PRDM11Q9NQV5 511 aa19.43■□□□□ 0.7
TRBV4-1-201ENST00000390357 TRPM1Q7Z4N2 1603 aa19.43■□□□□ 0.7
TRBV4-1-201ENST00000390357 ROCK2O75116 1388 aaKnown RBP19.43■□□□□ 0.7
TRBV4-1-201ENST00000390357 ZNF692Q9BU19 519 aaPredicted RBP19.42■□□□□ 0.7
TRBV4-1-201ENST00000390357 CABP2Q9NPB3 220 aa19.42■□□□□ 0.7
TRBV4-1-201ENST00000390357 QRICH2Q9H0J4 1663 aa19.42■□□□□ 0.7
TRBV4-1-201ENST00000390357 CRYBG1Q9Y4K1 1723 aa19.42■□□□□ 0.7
TRBV4-1-201ENST00000390357 PPIP5K1Q6PFW1 1433 aa19.42■□□□□ 0.7
TRBV4-1-201ENST00000390357 TRIM26Q12899 539 aaPredicted RBP19.4■□□□□ 0.7
TRBV4-1-201ENST00000390357 KRT27Q7Z3Y8 459 aa19.4■□□□□ 0.7
TRBV4-1-201ENST00000390357 SF3B2Q13435 895 aaKnown RBP19.39■□□□□ 0.69
TRBV4-1-201ENST00000390357 CABP1Q9NZU7 370 aa19.39■□□□□ 0.69
TRBV4-1-201ENST00000390357 NRAPQ86VF7 1730 aa19.39■□□□□ 0.69
TRBV4-1-201ENST00000390357 BRWD3Q6RI45 1802 aa19.39■□□□□ 0.69
TRBV4-1-201ENST00000390357 SPATA31A5Q5VU36 1347 aa19.38■□□□□ 0.69
TRBV4-1-201ENST00000390357 SPATA31A7Q8IWB4 1347 aa19.38■□□□□ 0.69
TRBV4-1-201ENST00000390357 BLMP54132 1417 aaPredicted RBP19.37■□□□□ 0.69
TRBV4-1-201ENST00000390357 KIAA0232Q92628 1395 aa19.37■□□□□ 0.69
TRBV4-1-201ENST00000390357 EVA1CP58658 441 aa19.36■□□□□ 0.69
TRBV4-1-201ENST00000390357 ZC3H6P61129 1189 aaKnown RBP19.36■□□□□ 0.69
TRBV4-1-201ENST00000390357 FAM98CQ17RN3 349 aaKnown RBP19.36■□□□□ 0.69
TRBV4-1-201ENST00000390357 CPDO75976 1380 aa19.35■□□□□ 0.69
TRBV4-1-201ENST00000390357 GCP02774 474 aa19.35■□□□□ 0.69
TRBV4-1-201ENST00000390357 NUTM2GQ5VZR2 741 aa19.35■□□□□ 0.69
TRBV4-1-201ENST00000390357 ZRANB1Q9UGI0 708 aa19.35■□□□□ 0.69
TRBV4-1-201ENST00000390357 PHRF1Q9P1Y6 1649 aaKnown RBP19.35■□□□□ 0.69
TRBV4-1-201ENST00000390357 TONSLQ96HA7 1378 aa19.34■□□□□ 0.69
TRBV4-1-201ENST00000390357 USP19O94966 1318 aa19.34■□□□□ 0.69
TRBV4-1-201ENST00000390357 A0A0G2JS52 829 aa19.34■□□□□ 0.69
TRBV4-1-201ENST00000390357 SLC24A1O60721 1099 aa19.34■□□□□ 0.69
TRBV4-1-201ENST00000390357 MYT1Q01538 1121 aa19.34■□□□□ 0.69
TRBV4-1-201ENST00000390357 CARD11Q9BXL7 1154 aa19.33■□□□□ 0.68
TRBV4-1-201ENST00000390357 USP6P35125 1406 aa19.33■□□□□ 0.68
TRBV4-1-201ENST00000390357 SBNO2Q9Y2G9 1366 aa19.32■□□□□ 0.68
TRBV4-1-201ENST00000390357 SPATA31A1Q5TZJ5 1347 aa19.32■□□□□ 0.68
TRBV4-1-201ENST00000390357 NLRP6P59044 892 aa19.32■□□□□ 0.68
TRBV4-1-201ENST00000390357 CHRNA2Q15822 529 aa19.32■□□□□ 0.68
TRBV4-1-201ENST00000390357 BARGINQ6ZT62 677 aa19.3■□□□□ 0.68
TRBV4-1-201ENST00000390357 PUS7Q96PZ0 661 aaKnown RBP19.3■□□□□ 0.68
TRBV4-1-201ENST00000390357 STRN4Q9NRL3 753 aa19.3■□□□□ 0.68
TRBV4-1-201ENST00000390357 THRAP3Q9Y2W1 955 aaKnown RBP19.3■□□□□ 0.68
TRBV4-1-201ENST00000390357 TTC21AQ8NDW8 1320 aa19.28■□□□□ 0.68
TRBV4-1-201ENST00000390357 SSH2Q76I76 1423 aa19.28■□□□□ 0.68
TRBV4-1-201ENST00000390357 KCNH5Q8NCM2 988 aa19.28■□□□□ 0.68
TRBV4-1-201ENST00000390357 BAG6P46379 1132 aa19.27■□□□□ 0.68
TRBV4-1-201ENST00000390357 EP400Q96L91 3159 aa19.27■□□□□ 0.67
TRBV4-1-201ENST00000390357 NRKQ7Z2Y5 1582 aa19.27■□□□□ 0.67
TRBV4-1-201ENST00000390357 TTC21BQ7Z4L5 1316 aa19.25■□□□□ 0.67
TRBV4-1-201ENST00000390357 CAMTA1Q9Y6Y1 1673 aa19.25■□□□□ 0.67
TRBV4-1-201ENST00000390357 C11orf95C9JLR9 678 aaPredicted RBP19.25■□□□□ 0.67
TRBV4-1-201ENST00000390357 FAM196AQ6ZSG2 479 aa19.25■□□□□ 0.67
TRBV4-1-201ENST00000390357 TCP11L2Q8N4U5 519 aa19.25■□□□□ 0.67
TRBV4-1-201ENST00000390357 AKAP12Q02952 1782 aa19.24■□□□□ 0.67
TRBV4-1-201ENST00000390357 THSD7AQ9UPZ6 1657 aa19.24■□□□□ 0.67
TRBV4-1-201ENST00000390357 AATKQ6ZMQ8 1374 aa19.24■□□□□ 0.67
TRBV4-1-201ENST00000390357 CPSF1Q10570 1443 aaKnown RBP19.24■□□□□ 0.67
TRBV4-1-201ENST00000390357 LMO7Q8WWI1 1683 aa19.24■□□□□ 0.67
TRBV4-1-201ENST00000390357 PDE3BQ13370 1112 aa19.23■□□□□ 0.67
TRBV4-1-201ENST00000390357 LARP1Q6PKG0 1096 aaKnown RBP19.23■□□□□ 0.67
TRBV4-1-201ENST00000390357 KTN1Q86UP2 1357 aaKnown RBP19.22■□□□□ 0.67
TRBV4-1-201ENST00000390357 SLIT3O75094 1523 aa19.22■□□□□ 0.67
TRBV4-1-201ENST00000390357 DEFB132Q7Z7B7 95 aa19.22■□□□□ 0.67
TRBV4-1-201ENST00000390357 USP35Q9P2H5 1018 aa19.22■□□□□ 0.67
TRBV4-1-201ENST00000390357 HDGFL2Q7Z4V5 671 aaPredicted RBP19.21■□□□□ 0.67
TRBV4-1-201ENST00000390357 RGPD1P0DJD0 1748 aa19.2■□□□□ 0.66
TRBV4-1-201ENST00000390357 TIMELESSQ9UNS1 1208 aa19.2■□□□□ 0.66
TRBV4-1-201ENST00000390357 ARHGEF25Q86VW2 580 aa19.19■□□□□ 0.66
TRBV4-1-201ENST00000390357 TERF2IPQ9NYB0 399 aa19.19■□□□□ 0.66
TRBV4-1-201ENST00000390357 COL5A2P05997 1499 aaPredicted RBP19.19■□□□□ 0.66
TRBV4-1-201ENST00000390357 CRB1P82279 1406 aa19.18■□□□□ 0.66
TRBV4-1-201ENST00000390357 PIK3C2AO00443 1686 aa19.18■□□□□ 0.66
TRBV4-1-201ENST00000390357 TMC1Q8TDI8 760 aa19.18■□□□□ 0.66
TRBV4-1-201ENST00000390357 CDCA7Q9BWT1 371 aaPredicted RBP19.17■□□□□ 0.66
TRBV4-1-201ENST00000390357 ZBTB7CA1YPR0 619 aa19.16■□□□□ 0.66
TRBV4-1-201ENST00000390357 TOM1L2Q6ZVM7 507 aa19.16■□□□□ 0.66
TRBV4-1-201ENST00000390357 USP31Q70CQ4 1352 aa19.16■□□□□ 0.66
TRBV4-1-201ENST00000390357 NINLQ9Y2I6 1382 aa19.16■□□□□ 0.66
TRBV4-1-201ENST00000390357 DISP2A7MBM2 1401 aa19.16■□□□□ 0.66
TRBV4-1-201ENST00000390357 MON2Q7Z3U7 1717 aa19.15■□□□□ 0.66
TRBV4-1-201ENST00000390357 COL18A1P39060 1754 aa19.15■□□□□ 0.66
TRBV4-1-201ENST00000390357 FAM182BQ5T319 152 aa19.15■□□□□ 0.66
TRBV4-1-201ENST00000390357 WDR17Q8IZU2 1322 aa19.15■□□□□ 0.66
TRBV4-1-201ENST00000390357 SLC12A5Q9H2X9 1139 aa19.14■□□□□ 0.65
TRBV4-1-201ENST00000390357 CLSPNQ9HAW4 1339 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms