RNA–Protein interactions for RNA: ENST00000389645.7

CAPRIN1-202, Transcript of cell cycle associated protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPRIN1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-202ENST00000389645 ATAD2Q6PL18 1390 aa15.63■□□□□ 0.09
CAPRIN1-202ENST00000389645 FYB1O15117 783 aa15.63■□□□□ 0.09
CAPRIN1-202ENST00000389645 U2AF1L5P0DN76 240 aaPredicted RBP15.63■□□□□ 0.09
CAPRIN1-202ENST00000389645 U2AF1Q01081 240 aaKnown RBP eCLIP15.63■□□□□ 0.09
CAPRIN1-202ENST00000389645 BACH2Q9BYV9 841 aa15.62■□□□□ 0.09
CAPRIN1-202ENST00000389645 HDGFL2Q7Z4V5 671 aaPredicted RBP15.62■□□□□ 0.09
CAPRIN1-202ENST00000389645 COG6Q9Y2V7 657 aa15.62■□□□□ 0.09
CAPRIN1-202ENST00000389645 AMOTL2Q9Y2J4 779 aa15.62■□□□□ 0.09
CAPRIN1-202ENST00000389645 NUDT16Q96DE0 195 aaKnown RBP15.61■□□□□ 0.09
CAPRIN1-202ENST00000389645 PANK1Q8TE04 598 aa15.6■□□□□ 0.09
CAPRIN1-202ENST00000389645 DMRT2Q9Y5R5 561 aa15.6■□□□□ 0.09
CAPRIN1-202ENST00000389645 PLEKHG1Q9ULL1 1385 aa15.6■□□□□ 0.09
CAPRIN1-202ENST00000389645 SLFN5Q08AF3 891 aa15.6■□□□□ 0.09
CAPRIN1-202ENST00000389645 CD163L1Q9NR16 1453 aa15.6■□□□□ 0.09
CAPRIN1-202ENST00000389645 CFAP53Q96M91 514 aa15.6■□□□□ 0.09
CAPRIN1-202ENST00000389645 RBM33Q96EV2 1170 aaKnown RBP15.59■□□□□ 0.09
CAPRIN1-202ENST00000389645 ZRANB1Q9UGI0 708 aa15.59■□□□□ 0.09
CAPRIN1-202ENST00000389645 BLMP54132 1417 aaPredicted RBP15.59■□□□□ 0.09
CAPRIN1-202ENST00000389645 PTPRUQ92729 1446 aa15.58■□□□□ 0.09
CAPRIN1-202ENST00000389645 E9PSI1 815 aa15.58■□□□□ 0.09
CAPRIN1-202ENST00000389645 RIMS1Q86UR5 1692 aaKnown RBP15.58■□□□□ 0.08
CAPRIN1-202ENST00000389645 DLC1Q96QB1 1528 aa15.57■□□□□ 0.08
CAPRIN1-202ENST00000389645 PRR36Q9H6K5 1346 aa15.57■□□□□ 0.08
CAPRIN1-202ENST00000389645 CENPQQ7L2Z9 268 aaPredicted RBP15.57■□□□□ 0.08
CAPRIN1-202ENST00000389645 TCP11L2Q8N4U5 519 aa15.56■□□□□ 0.08
CAPRIN1-202ENST00000389645 MS4A1P11836 297 aa15.56■□□□□ 0.08
CAPRIN1-202ENST00000389645 CCDC61Q9Y6R9 512 aa15.56■□□□□ 0.08
CAPRIN1-202ENST00000389645 PPIP5K1Q6PFW1 1433 aa15.55■□□□□ 0.08
CAPRIN1-202ENST00000389645 TBX22Q9Y458 520 aa15.55■□□□□ 0.08
CAPRIN1-202ENST00000389645 NINLQ9Y2I6 1382 aa15.55■□□□□ 0.08
CAPRIN1-202ENST00000389645 NME9Q86XW9 330 aa15.55■□□□□ 0.08
CAPRIN1-202ENST00000389645 POLR3AO14802 1390 aaPredicted RBP15.54■□□□□ 0.08
CAPRIN1-202ENST00000389645 KCNA6P17658 529 aa15.53■□□□□ 0.08
CAPRIN1-202ENST00000389645 SIRT1Q96EB6 747 aa15.53■□□□□ 0.08
CAPRIN1-202ENST00000389645 FAM135BQ49AJ0 1406 aa15.53■□□□□ 0.08
CAPRIN1-202ENST00000389645 WWC1Q8IX03 1113 aa15.53■□□□□ 0.08
CAPRIN1-202ENST00000389645 ARHGAP23Q9P227 1491 aa15.53■□□□□ 0.08
CAPRIN1-202ENST00000389645 TECPR2O15040 1411 aa15.52■□□□□ 0.08
CAPRIN1-202ENST00000389645 PMFBP1Q8TBY8 1022 aa15.52■□□□□ 0.08
CAPRIN1-202ENST00000389645 SLIT1O75093 1534 aa15.52■□□□□ 0.07
CAPRIN1-202ENST00000389645 DDRGK1Q96HY6 314 aa15.52■□□□□ 0.07
CAPRIN1-202ENST00000389645 MED14O60244 1454 aa15.52■□□□□ 0.07
CAPRIN1-202ENST00000389645 ANKLE2Q86XL3 938 aa15.51■□□□□ 0.07
CAPRIN1-202ENST00000389645 FTSJ3Q8IY81 847 aaKnown RBP15.51■□□□□ 0.07
CAPRIN1-202ENST00000389645 NSD2O96028 1365 aa15.5■□□□□ 0.07
CAPRIN1-202ENST00000389645 BRPF3Q9ULD4 1205 aa15.5■□□□□ 0.07
CAPRIN1-202ENST00000389645 FAM161AQ3B820 660 aa15.5■□□□□ 0.07
CAPRIN1-202ENST00000389645 RUNDC1Q96C34 613 aa15.5■□□□□ 0.07
CAPRIN1-202ENST00000389645 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.49■□□□□ 0.07
CAPRIN1-202ENST00000389645 MAPK8IP3Q9UPT6 1336 aa15.49■□□□□ 0.07
CAPRIN1-202ENST00000389645 CEP170BQ9Y4F5 1589 aaPredicted RBP15.49■□□□□ 0.07
CAPRIN1-202ENST00000389645 TNNQ9UQP3 1299 aa15.49■□□□□ 0.07
CAPRIN1-202ENST00000389645 ACEP12821 1306 aa15.49■□□□□ 0.07
CAPRIN1-202ENST00000389645 SOX12O15370 315 aa15.48■□□□□ 0.07
CAPRIN1-202ENST00000389645 TSR2Q969E8 191 aaKnown RBP15.48■□□□□ 0.07
CAPRIN1-202ENST00000389645 CPS1P31327 1500 aa15.48■□□□□ 0.07
CAPRIN1-202ENST00000389645 INSRP06213 1382 aa15.48■□□□□ 0.07
CAPRIN1-202ENST00000389645 USP32Q8NFA0 1604 aa15.48■□□□□ 0.07
CAPRIN1-202ENST00000389645 EMILIN1Q9Y6C2 1016 aa15.48■□□□□ 0.07
CAPRIN1-202ENST00000389645 ZNF521Q96K83 1311 aa15.47■□□□□ 0.07
CAPRIN1-202ENST00000389645 RRS1Q15050 365 aaKnown RBP15.47■□□□□ 0.07
CAPRIN1-202ENST00000389645 POLKQ9UBT6 870 aa15.47■□□□□ 0.07
CAPRIN1-202ENST00000389645 CPSF1Q10570 1443 aaKnown RBP15.47■□□□□ 0.07
CAPRIN1-202ENST00000389645 IGHDP01880 384 aa15.47■□□□□ 0.07
CAPRIN1-202ENST00000389645 PODXL2Q9NZ53 605 aa15.46■□□□□ 0.07
CAPRIN1-202ENST00000389645 ATP7BP35670 1465 aa15.46■□□□□ 0.06
CAPRIN1-202ENST00000389645 ADAMTSL3P82987 1691 aa15.45■□□□□ 0.06
CAPRIN1-202ENST00000389645 KNDC1Q76NI1 1749 aa15.45■□□□□ 0.06
CAPRIN1-202ENST00000389645 NKTRP30414 1462 aaKnown RBP15.45■□□□□ 0.06
CAPRIN1-202ENST00000389645 SMC4Q9NTJ3 1288 aa15.44■□□□□ 0.06
CAPRIN1-202ENST00000389645 COG3Q96JB2 828 aa15.44■□□□□ 0.06
CAPRIN1-202ENST00000389645 SHPRHQ149N8 1683 aa15.44■□□□□ 0.06
CAPRIN1-202ENST00000389645 DIAPH1O60610 1272 aaKnown RBP15.43■□□□□ 0.06
CAPRIN1-202ENST00000389645 NGDNQ8NEJ9 315 aaKnown RBP15.43■□□□□ 0.06
CAPRIN1-202ENST00000389645 ZNF692Q9BU19 519 aaPredicted RBP15.43■□□□□ 0.06
CAPRIN1-202ENST00000389645 EDC4Q6P2E9 1401 aaKnown RBP15.43■□□□□ 0.06
CAPRIN1-202ENST00000389645 SPRYD3Q8NCJ5 442 aa15.42■□□□□ 0.06
CAPRIN1-202ENST00000389645 MYH16Q9H6N6 1097 aa15.42■□□□□ 0.06
CAPRIN1-202ENST00000389645 ITPRIPQ8IWB1 547 aa15.42■□□□□ 0.06
CAPRIN1-202ENST00000389645 SLKQ9H2G2 1235 aaPredicted RBP15.42■□□□□ 0.06
CAPRIN1-202ENST00000389645 SETD1BQ9UPS6 1966 aaKnown RBP15.42■□□□□ 0.06
CAPRIN1-202ENST00000389645 TTC21BQ7Z4L5 1316 aa15.41■□□□□ 0.06
CAPRIN1-202ENST00000389645 HMOX1P09601 288 aa15.41■□□□□ 0.06
CAPRIN1-202ENST00000389645 NUTM2GQ5VZR2 741 aa15.41■□□□□ 0.06
CAPRIN1-202ENST00000389645 KDM2BQ8NHM5 1336 aa15.41■□□□□ 0.06
CAPRIN1-202ENST00000389645 PLEKHG3A1L390 1219 aa15.41■□□□□ 0.06
CAPRIN1-202ENST00000389645 ELL2O00472 640 aaPredicted RBP15.41■□□□□ 0.06
CAPRIN1-202ENST00000389645 RARSP54136 660 aaKnown RBP15.41■□□□□ 0.06
CAPRIN1-202ENST00000389645 VSIG10Q8N0Z9 540 aa15.41■□□□□ 0.06
CAPRIN1-202ENST00000389645 UPF2Q9HAU5 1272 aaKnown RBP15.41■□□□□ 0.06
CAPRIN1-202ENST00000389645 RLBP1P12271 317 aa15.4■□□□□ 0.06
CAPRIN1-202ENST00000389645 C14orf37Q86TY3 774 aa15.4■□□□□ 0.06
CAPRIN1-202ENST00000389645 EXOSC9Q06265 439 aaKnown RBP15.39■□□□□ 0.05
CAPRIN1-202ENST00000389645 CDC42BPGQ6DT37 1551 aa15.39■□□□□ 0.05
CAPRIN1-202ENST00000389645 RIPK4P57078 832 aa15.38■□□□□ 0.05
CAPRIN1-202ENST00000389645 PDE3AQ14432 1141 aa15.38■□□□□ 0.05
CAPRIN1-202ENST00000389645 C8orf34Q49A92 452 aa15.38■□□□□ 0.05
CAPRIN1-202ENST00000389645 KIF20BQ96Q89 1820 aa15.38■□□□□ 0.05
CAPRIN1-202ENST00000389645 PTCH1Q13635 1447 aa15.37■□□□□ 0.05
CAPRIN1-202ENST00000389645 HSPA2P54652 639 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms