RNA–Protein interactions for RNA: ENST00000389103.4

UBE3C-202, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 5 BASIC

Gene UBE3C, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-202ENST00000389103 CABP2Q9NPB3 220 aa20.21■□□□□ 0.83
UBE3C-202ENST00000389103 ACEP12821 1306 aa20.21■□□□□ 0.83
UBE3C-202ENST00000389103 PLCH1Q4KWH8 1693 aa20.2■□□□□ 0.82
UBE3C-202ENST00000389103 PLEKHG3A1L390 1219 aa20.2■□□□□ 0.82
UBE3C-202ENST00000389103 GJD4Q96KN9 370 aaPredicted RBP20.2■□□□□ 0.82
UBE3C-202ENST00000389103 FAM83GA6ND36 823 aa20.19■□□□□ 0.82
UBE3C-202ENST00000389103 CRYBG1Q9Y4K1 1723 aa20.19■□□□□ 0.82
UBE3C-202ENST00000389103 PPIP5K1Q6PFW1 1433 aa20.18■□□□□ 0.82
UBE3C-202ENST00000389103 TONSLQ96HA7 1378 aa20.18■□□□□ 0.82
UBE3C-202ENST00000389103 GLI3P10071 1580 aa20.17■□□□□ 0.82
UBE3C-202ENST00000389103 RALGAPBQ86X10 1494 aa20.17■□□□□ 0.82
UBE3C-202ENST00000389103 NWD2Q9ULI1 1742 aa20.15■□□□□ 0.82
UBE3C-202ENST00000389103 NUTM2GQ5VZR2 741 aa20.15■□□□□ 0.82
UBE3C-202ENST00000389103 EVC2Q86UK5 1308 aa20.13■□□□□ 0.81
UBE3C-202ENST00000389103 VPS72Q15906 364 aa20.13■□□□□ 0.81
UBE3C-202ENST00000389103 CABP1Q9NZU7 370 aa20.13■□□□□ 0.81
UBE3C-202ENST00000389103 PHRF1Q9P1Y6 1649 aaKnown RBP20.12■□□□□ 0.81
UBE3C-202ENST00000389103 BTG4Q9NY30 223 aa20.12■□□□□ 0.81
UBE3C-202ENST00000389103 COL14A1Q05707 1796 aaKnown RBP20.11■□□□□ 0.81
UBE3C-202ENST00000389103 NRAPQ86VF7 1730 aa20.11■□□□□ 0.81
UBE3C-202ENST00000389103 CARD11Q9BXL7 1154 aa20.11■□□□□ 0.81
UBE3C-202ENST00000389103 ATAD2Q6PL18 1390 aa20.11■□□□□ 0.81
UBE3C-202ENST00000389103 ABTB2Q8N961 1025 aa20.09■□□□□ 0.81
UBE3C-202ENST00000389103 CCDC9Q9Y3X0 531 aaKnown RBP20.09■□□□□ 0.81
UBE3C-202ENST00000389103 KIAA0232Q92628 1395 aa20.09■□□□□ 0.81
UBE3C-202ENST00000389103 PRDM11Q9NQV5 511 aa20.09■□□□□ 0.81
UBE3C-202ENST00000389103 USP6P35125 1406 aa20.07■□□□□ 0.8
UBE3C-202ENST00000389103 NRKQ7Z2Y5 1582 aa20.06■□□□□ 0.8
UBE3C-202ENST00000389103 ZC3H6P61129 1189 aaKnown RBP20.06■□□□□ 0.8
UBE3C-202ENST00000389103 CHRNA2Q15822 529 aa20.06■□□□□ 0.8
UBE3C-202ENST00000389103 SEPT12Q8IYM1 358 aa20.05■□□□□ 0.8
UBE3C-202ENST00000389103 USP19O94966 1318 aa20.05■□□□□ 0.8
UBE3C-202ENST00000389103 SBNO2Q9Y2G9 1366 aa20.05■□□□□ 0.8
UBE3C-202ENST00000389103 ONECUT3O60422 494 aaPredicted RBP20.04■□□□□ 0.8
UBE3C-202ENST00000389103 BRD4O60885 1362 aaPredicted RBP20.04■□□□□ 0.8
UBE3C-202ENST00000389103 SSH2Q76I76 1423 aa20.04■□□□□ 0.8
UBE3C-202ENST00000389103 BRWD3Q6RI45 1802 aa20.03■□□□□ 0.8
UBE3C-202ENST00000389103 NLRP13Q86W25 1043 aa20.02■□□□□ 0.8
UBE3C-202ENST00000389103 EP400Q96L91 3159 aa20.02■□□□□ 0.8
UBE3C-202ENST00000389103 FAM98CQ17RN3 349 aaKnown RBP20.01■□□□□ 0.79
UBE3C-202ENST00000389103 SPATA31A5Q5VU36 1347 aa20.01■□□□□ 0.79
UBE3C-202ENST00000389103 SPATA31A7Q8IWB4 1347 aa20.01■□□□□ 0.79
UBE3C-202ENST00000389103 GCP02774 474 aa20■□□□□ 0.79
UBE3C-202ENST00000389103 PIK3C2AO00443 1686 aa20■□□□□ 0.79
UBE3C-202ENST00000389103 CPDO75976 1380 aa19.99■□□□□ 0.79
UBE3C-202ENST00000389103 NLRP6P59044 892 aa19.99■□□□□ 0.79
UBE3C-202ENST00000389103 STRN4Q9NRL3 753 aa19.99■□□□□ 0.79
UBE3C-202ENST00000389103 AKAP12Q02952 1782 aa19.99■□□□□ 0.79
UBE3C-202ENST00000389103 CPSF1Q10570 1443 aaKnown RBP19.99■□□□□ 0.79
UBE3C-202ENST00000389103 A0A0G2JS52 829 aa19.98■□□□□ 0.79
UBE3C-202ENST00000389103 MYT1Q01538 1121 aa19.98■□□□□ 0.79
UBE3C-202ENST00000389103 ZNF692Q9BU19 519 aaPredicted RBP19.98■□□□□ 0.79
UBE3C-202ENST00000389103 LMO7Q8WWI1 1683 aa19.97■□□□□ 0.79
UBE3C-202ENST00000389103 CAMTA1Q9Y6Y1 1673 aa19.97■□□□□ 0.79
UBE3C-202ENST00000389103 TTC21BQ7Z4L5 1316 aa19.97■□□□□ 0.79
UBE3C-202ENST00000389103 KRT27Q7Z3Y8 459 aa19.97■□□□□ 0.79
UBE3C-202ENST00000389103 PCGF6Q9BYE7 350 aa19.97■□□□□ 0.79
UBE3C-202ENST00000389103 SLIT3O75094 1523 aa19.97■□□□□ 0.79
UBE3C-202ENST00000389103 SPATA31A1Q5TZJ5 1347 aa19.96■□□□□ 0.79
UBE3C-202ENST00000389103 KTN1Q86UP2 1357 aaKnown RBP19.95■□□□□ 0.78
UBE3C-202ENST00000389103 CD163L1Q9NR16 1453 aa19.95■□□□□ 0.78
UBE3C-202ENST00000389103 ST20-MTHFSA0A0A6YYL1 179 aa19.94■□□□□ 0.78
UBE3C-202ENST00000389103 THSD7AQ9UPZ6 1657 aa19.94■□□□□ 0.78
UBE3C-202ENST00000389103 CCDC125Q86Z20 511 aa19.94■□□□□ 0.78
UBE3C-202ENST00000389103 TESK2Q96S53 571 aa19.94■□□□□ 0.78
UBE3C-202ENST00000389103 ZBTB7CA1YPR0 619 aa19.93■□□□□ 0.78
UBE3C-202ENST00000389103 EVA1CP58658 441 aa19.93■□□□□ 0.78
UBE3C-202ENST00000389103 MON2Q7Z3U7 1717 aa19.93■□□□□ 0.78
UBE3C-202ENST00000389103 TTC21AQ8NDW8 1320 aa19.92■□□□□ 0.78
UBE3C-202ENST00000389103 BLMP54132 1417 aaPredicted RBP19.92■□□□□ 0.78
UBE3C-202ENST00000389103 LARP1Q6PKG0 1096 aaKnown RBP19.92■□□□□ 0.78
UBE3C-202ENST00000389103 TMC1Q8TDI8 760 aa19.92■□□□□ 0.78
UBE3C-202ENST00000389103 USP35Q9P2H5 1018 aa19.92■□□□□ 0.78
UBE3C-202ENST00000389103 SLC12A5Q9H2X9 1139 aa19.91■□□□□ 0.78
UBE3C-202ENST00000389103 COL5A2P05997 1499 aaPredicted RBP19.9■□□□□ 0.78
UBE3C-202ENST00000389103 FAM182BQ5T319 152 aa19.9■□□□□ 0.78
UBE3C-202ENST00000389103 AATKQ6ZMQ8 1374 aa19.89■□□□□ 0.77
UBE3C-202ENST00000389103 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.89■□□□□ 0.77
UBE3C-202ENST00000389103 SOX12O15370 315 aa19.88■□□□□ 0.77
UBE3C-202ENST00000389103 PUS7Q96PZ0 661 aaKnown RBP19.88■□□□□ 0.77
UBE3C-202ENST00000389103 ZRANB1Q9UGI0 708 aa19.88■□□□□ 0.77
UBE3C-202ENST00000389103 CLSPNQ9HAW4 1339 aa19.88■□□□□ 0.77
UBE3C-202ENST00000389103 USP47Q96K76 1375 aa19.88■□□□□ 0.77
UBE3C-202ENST00000389103 A0A1W2PP64 1363 aa19.87■□□□□ 0.77
UBE3C-202ENST00000389103 COL18A1P39060 1754 aa19.87■□□□□ 0.77
UBE3C-202ENST00000389103 BARGINQ6ZT62 677 aa19.87■□□□□ 0.77
UBE3C-202ENST00000389103 HDGFL2Q7Z4V5 671 aaPredicted RBP19.87■□□□□ 0.77
UBE3C-202ENST00000389103 NME9Q86XW9 330 aa19.87■□□□□ 0.77
UBE3C-202ENST00000389103 DEFB132Q7Z7B7 95 aa19.86■□□□□ 0.77
UBE3C-202ENST00000389103 KCNH5Q8NCM2 988 aa19.86■□□□□ 0.77
UBE3C-202ENST00000389103 AXIN2Q9Y2T1 843 aa19.86■□□□□ 0.77
UBE3C-202ENST00000389103 NFAT5O94916 1531 aa19.86■□□□□ 0.77
UBE3C-202ENST00000389103 ARHGEF25Q86VW2 580 aa19.85■□□□□ 0.77
UBE3C-202ENST00000389103 TCP11L2Q8N4U5 519 aa19.85■□□□□ 0.77
UBE3C-202ENST00000389103 TIMELESSQ9UNS1 1208 aa19.85■□□□□ 0.77
UBE3C-202ENST00000389103 TERF2IPQ9NYB0 399 aa19.84■□□□□ 0.77
UBE3C-202ENST00000389103 USP31Q70CQ4 1352 aa19.84■□□□□ 0.77
UBE3C-202ENST00000389103 CRB1P82279 1406 aa19.84■□□□□ 0.77
UBE3C-202ENST00000389103 EDC4Q6P2E9 1401 aaKnown RBP19.84■□□□□ 0.77
UBE3C-202ENST00000389103 SF3B2Q13435 895 aaKnown RBP19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms