RNA–Protein interactions for RNA: ENST00000383820.9

RPUSD3-201, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD3, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-201ENST00000383820 KRT27Q7Z3Y8 459 aa26.11■■□□□ 1.77
RPUSD3-201ENST00000383820 BTG4Q9NY30 223 aa26.1■■□□□ 1.77
RPUSD3-201ENST00000383820 CRYBG1Q9Y4K1 1723 aa26.1■■□□□ 1.77
RPUSD3-201ENST00000383820 ATP7BP35670 1465 aa26.1■■□□□ 1.77
RPUSD3-201ENST00000383820 NUDT16Q96DE0 195 aaKnown RBP26.07■■□□□ 1.76
RPUSD3-201ENST00000383820 KIAA1210Q9ULL0 1709 aa26.07■■□□□ 1.76
RPUSD3-201ENST00000383820 PAK3O75914 559 aaPredicted RBP26.06■■□□□ 1.76
RPUSD3-201ENST00000383820 DEFB132Q7Z7B7 95 aa26.05■■□□□ 1.76
RPUSD3-201ENST00000383820 A0A0G2JS52 829 aa26.04■■□□□ 1.76
RPUSD3-201ENST00000383820 MYT1Q01538 1121 aa26.04■■□□□ 1.76
RPUSD3-201ENST00000383820 FAM98CQ17RN3 349 aaKnown RBP26.04■■□□□ 1.76
RPUSD3-201ENST00000383820 SPATA31A5Q5VU36 1347 aa26.03■■□□□ 1.76
RPUSD3-201ENST00000383820 SPATA31A7Q8IWB4 1347 aa26.03■■□□□ 1.76
RPUSD3-201ENST00000383820 PRDM11Q9NQV5 511 aa26.02■■□□□ 1.76
RPUSD3-201ENST00000383820 TOPAZ1Q8N9V7 1692 aa26.01■■□□□ 1.75
RPUSD3-201ENST00000383820 CDK19Q9BWU1 502 aa26.01■■□□□ 1.75
RPUSD3-201ENST00000383820 POLR3AO14802 1390 aaPredicted RBP26■■□□□ 1.75
RPUSD3-201ENST00000383820 CCDC61Q9Y6R9 512 aa25.99■■□□□ 1.75
RPUSD3-201ENST00000383820 PHRF1Q9P1Y6 1649 aaKnown RBP25.99■■□□□ 1.75
RPUSD3-201ENST00000383820 THSD7AQ9UPZ6 1657 aa25.98■■□□□ 1.75
RPUSD3-201ENST00000383820 SRCAPQ6ZRS2 3230 aa25.98■■□□□ 1.75
RPUSD3-201ENST00000383820 BAG6P46379 1132 aa25.97■■□□□ 1.75
RPUSD3-201ENST00000383820 KIAA0232Q92628 1395 aa25.96■■□□□ 1.75
RPUSD3-201ENST00000383820 PLEKHG3A1L390 1219 aa25.96■■□□□ 1.75
RPUSD3-201ENST00000383820 ACEP12821 1306 aa25.95■■□□□ 1.75
RPUSD3-201ENST00000383820 NBPF8Q3BBV2 869 aa25.95■■□□□ 1.74
RPUSD3-201ENST00000383820 RGPD1P0DJD0 1748 aa25.94■■□□□ 1.74
RPUSD3-201ENST00000383820 SPATA31A1Q5TZJ5 1347 aa25.92■■□□□ 1.74
RPUSD3-201ENST00000383820 NBPF1Q3BBV0 1214 aa25.91■■□□□ 1.74
RPUSD3-201ENST00000383820 CHRNA2Q15822 529 aa25.9■■□□□ 1.74
RPUSD3-201ENST00000383820 ZC3H6P61129 1189 aaKnown RBP25.89■■□□□ 1.74
RPUSD3-201ENST00000383820 NRKQ7Z2Y5 1582 aa25.88■■□□□ 1.73
RPUSD3-201ENST00000383820 NUTM2GQ5VZR2 741 aa25.88■■□□□ 1.73
RPUSD3-201ENST00000383820 LRP5O75197 1615 aa25.88■■□□□ 1.73
RPUSD3-201ENST00000383820 DISP2A7MBM2 1401 aa25.88■■□□□ 1.73
RPUSD3-201ENST00000383820 CENPJQ9HC77 1338 aaPredicted RBP25.88■■□□□ 1.73
RPUSD3-201ENST00000383820 BRD4O60885 1362 aaPredicted RBP25.87■■□□□ 1.73
RPUSD3-201ENST00000383820 ABTB2Q8N961 1025 aa25.87■■□□□ 1.73
RPUSD3-201ENST00000383820 STRN4Q9NRL3 753 aa25.87■■□□□ 1.73
RPUSD3-201ENST00000383820 USP19O94966 1318 aa25.87■■□□□ 1.73
RPUSD3-201ENST00000383820 CPDO75976 1380 aa25.86■■□□□ 1.73
RPUSD3-201ENST00000383820 SRPK2P78362 688 aaKnown RBP25.85■■□□□ 1.73
RPUSD3-201ENST00000383820 FAM182BQ5T319 152 aa25.85■■□□□ 1.73
RPUSD3-201ENST00000383820 PPIP5K1Q6PFW1 1433 aa25.85■■□□□ 1.73
RPUSD3-201ENST00000383820 SSH2Q76I76 1423 aa25.85■■□□□ 1.73
RPUSD3-201ENST00000383820 BARGINQ6ZT62 677 aa25.84■■□□□ 1.73
RPUSD3-201ENST00000383820 TNS1Q9HBL0 1735 aaKnown RBP25.84■■□□□ 1.73
RPUSD3-201ENST00000383820 EVA1CP58658 441 aa25.83■■□□□ 1.73
RPUSD3-201ENST00000383820 EN1Q05925 392 aaPredicted RBP25.83■■□□□ 1.73
RPUSD3-201ENST00000383820 FAM196AQ6ZSG2 479 aa25.83■■□□□ 1.73
RPUSD3-201ENST00000383820 NLRP13Q86W25 1043 aa25.83■■□□□ 1.73
RPUSD3-201ENST00000383820 LMO7Q8WWI1 1683 aa25.83■■□□□ 1.73
RPUSD3-201ENST00000383820 CAMTA1Q9Y6Y1 1673 aa25.82■■□□□ 1.72
RPUSD3-201ENST00000383820 QRICH2Q9H0J4 1663 aa25.81■■□□□ 1.72
RPUSD3-201ENST00000383820 CABP2Q9NPB3 220 aa25.8■■□□□ 1.72
RPUSD3-201ENST00000383820 PSDA5PKW4 1024 aaPredicted RBP25.78■■□□□ 1.72
RPUSD3-201ENST00000383820 GCP02774 474 aa25.78■■□□□ 1.72
RPUSD3-201ENST00000383820 USP35Q9P2H5 1018 aa25.78■■□□□ 1.72
RPUSD3-201ENST00000383820 TCP11L2Q8N4U5 519 aa25.77■■□□□ 1.72
RPUSD3-201ENST00000383820 THRAP3Q9Y2W1 955 aaKnown RBP25.77■■□□□ 1.72
RPUSD3-201ENST00000383820 PDE3BQ13370 1112 aa25.76■■□□□ 1.71
RPUSD3-201ENST00000383820 LARP1Q6PKG0 1096 aaKnown RBP25.76■■□□□ 1.71
RPUSD3-201ENST00000383820 PARD3Q8TEW0 1356 aa25.76■■□□□ 1.71
RPUSD3-201ENST00000383820 USP6P35125 1406 aa25.76■■□□□ 1.71
RPUSD3-201ENST00000383820 TRIM37O94972 964 aa25.75■■□□□ 1.71
RPUSD3-201ENST00000383820 L3MBTL2Q969R5 705 aa25.75■■□□□ 1.71
RPUSD3-201ENST00000383820 CAMKK2Q96RR4 588 aa25.74■■□□□ 1.71
RPUSD3-201ENST00000383820 CABP1Q9NZU7 370 aa25.74■■□□□ 1.71
RPUSD3-201ENST00000383820 COL5A2P05997 1499 aaPredicted RBP25.73■■□□□ 1.71
RPUSD3-201ENST00000383820 EZH2Q15910 746 aaKnown RBP25.73■■□□□ 1.71
RPUSD3-201ENST00000383820 TRPM1Q7Z4N2 1603 aa25.72■■□□□ 1.71
RPUSD3-201ENST00000383820 SLIT3O75094 1523 aa25.72■■□□□ 1.71
RPUSD3-201ENST00000383820 EVC2Q86UK5 1308 aa25.71■■□□□ 1.71
RPUSD3-201ENST00000383820 APBA3O96018 575 aa25.7■■□□□ 1.7
RPUSD3-201ENST00000383820 NLRP6P59044 892 aa25.7■■□□□ 1.7
RPUSD3-201ENST00000383820 R3HDM1Q15032 1099 aaKnown RBP25.7■■□□□ 1.7
RPUSD3-201ENST00000383820 PARP4Q9UKK3 1724 aaKnown RBP25.7■■□□□ 1.7
RPUSD3-201ENST00000383820 CRB1P82279 1406 aa25.7■■□□□ 1.7
RPUSD3-201ENST00000383820 AATKQ6ZMQ8 1374 aa25.69■■□□□ 1.7
RPUSD3-201ENST00000383820 C11orf95C9JLR9 678 aaPredicted RBP25.69■■□□□ 1.7
RPUSD3-201ENST00000383820 ZNF692Q9BU19 519 aaPredicted RBP25.66■■□□□ 1.7
RPUSD3-201ENST00000383820 PIK3C2AO00443 1686 aa25.66■■□□□ 1.7
RPUSD3-201ENST00000383820 RREB1Q92766 1687 aa25.66■■□□□ 1.7
RPUSD3-201ENST00000383820 ROCK2O75116 1388 aaKnown RBP25.65■■□□□ 1.7
RPUSD3-201ENST00000383820 SIN3AQ96ST3 1273 aa25.64■■□□□ 1.7
RPUSD3-201ENST00000383820 COL18A1P39060 1754 aa25.62■■□□□ 1.69
RPUSD3-201ENST00000383820 ZBTB7CA1YPR0 619 aa25.61■■□□□ 1.69
RPUSD3-201ENST00000383820 AKAP12Q02952 1782 aa25.61■■□□□ 1.69
RPUSD3-201ENST00000383820 NUP188Q5SRE5 1749 aa25.6■■□□□ 1.69
RPUSD3-201ENST00000383820 KCNH5Q8NCM2 988 aa25.6■■□□□ 1.69
RPUSD3-201ENST00000383820 OVOS2A0A0G2JMS6 1433 aa25.6■■□□□ 1.69
RPUSD3-201ENST00000383820 OVOS2A0A0J9YW53 1432 aa25.6■■□□□ 1.69
RPUSD3-201ENST00000383820 OVOS2Q6IE36 1432 aa25.6■■□□□ 1.69
RPUSD3-201ENST00000383820 TTC21BQ7Z4L5 1316 aa25.6■■□□□ 1.69
RPUSD3-201ENST00000383820 TTC21AQ8NDW8 1320 aa25.6■■□□□ 1.69
RPUSD3-201ENST00000383820 CPSF1Q10570 1443 aaKnown RBP25.59■■□□□ 1.69
RPUSD3-201ENST00000383820 PEAK1Q9H792 1746 aa25.59■■□□□ 1.69
RPUSD3-201ENST00000383820 NEUROD1Q13562 356 aa25.58■■□□□ 1.69
RPUSD3-201ENST00000383820 NBPF14Q5TI25 921 aa25.58■■□□□ 1.69
RPUSD3-201ENST00000383820 TOM1L2Q6ZVM7 507 aa25.58■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms