RNA–Protein interactions for RNA: ENST00000382671.8

PSMD13-202, Transcript of proteasome 26S subunit, non-ATPase 13, humanhuman

TSL 1 (best)

Gene PSMD13, Length 1,489 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD13-202ENST00000382671 SLC24A1O60721 1099 aa22.28■■□□□ 1.16
PSMD13-202ENST00000382671 PAK3O75914 559 aaPredicted RBP22.28■■□□□ 1.16
PSMD13-202ENST00000382671 BRD4O60885 1362 aaPredicted RBP22.26■■□□□ 1.15
PSMD13-202ENST00000382671 NGLY1Q96IV0 654 aa22.26■■□□□ 1.15
PSMD13-202ENST00000382671 PUS7Q96PZ0 661 aaKnown RBP22.25■■□□□ 1.15
PSMD13-202ENST00000382671 CABLES1Q8TDN4 633 aa22.24■■□□□ 1.15
PSMD13-202ENST00000382671 USP6P35125 1406 aa22.24■■□□□ 1.15
PSMD13-202ENST00000382671 PHRF1Q9P1Y6 1649 aaKnown RBP22.23■■□□□ 1.15
PSMD13-202ENST00000382671 HAP1P54257 671 aaPredicted RBP22.22■■□□□ 1.15
PSMD13-202ENST00000382671 FNBP4Q8N3X1 1017 aaPredicted RBP22.22■■□□□ 1.15
PSMD13-202ENST00000382671 MON2Q7Z3U7 1717 aa22.22■■□□□ 1.15
PSMD13-202ENST00000382671 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.21■■□□□ 1.15
PSMD13-202ENST00000382671 ZNF692Q9BU19 519 aaPredicted RBP22.21■■□□□ 1.15
PSMD13-202ENST00000382671 CPSF1Q10570 1443 aaKnown RBP22.2■■□□□ 1.15
PSMD13-202ENST00000382671 PLCH1Q4KWH8 1693 aa22.2■■□□□ 1.14
PSMD13-202ENST00000382671 PLEKHG5O94827 1062 aa22.2■■□□□ 1.14
PSMD13-202ENST00000382671 SSH2Q76I76 1423 aa22.2■■□□□ 1.14
PSMD13-202ENST00000382671 NRKQ7Z2Y5 1582 aa22.2■■□□□ 1.14
PSMD13-202ENST00000382671 NWD2Q9ULI1 1742 aa22.2■■□□□ 1.14
PSMD13-202ENST00000382671 USP21Q9UK80 565 aa22.18■■□□□ 1.14
PSMD13-202ENST00000382671 PIK3C2AO00443 1686 aa22.17■■□□□ 1.14
PSMD13-202ENST00000382671 SLIT2O94813 1529 aa22.17■■□□□ 1.14
PSMD13-202ENST00000382671 ABTB2Q8N961 1025 aa22.17■■□□□ 1.14
PSMD13-202ENST00000382671 BCL9LQ86UU0 1499 aa22.17■■□□□ 1.14
PSMD13-202ENST00000382671 TMF1P82094 1093 aa22.16■■□□□ 1.14
PSMD13-202ENST00000382671 QTRT2Q9H974 415 aaKnown RBP22.16■■□□□ 1.14
PSMD13-202ENST00000382671 CD163L1Q9NR16 1453 aa22.16■■□□□ 1.14
PSMD13-202ENST00000382671 COL14A1Q05707 1796 aaKnown RBP22.16■■□□□ 1.14
PSMD13-202ENST00000382671 NUTM2GQ5VZR2 741 aa22.15■■□□□ 1.14
PSMD13-202ENST00000382671 KTN1Q86UP2 1357 aaKnown RBP22.15■■□□□ 1.14
PSMD13-202ENST00000382671 NINLQ9Y2I6 1382 aa22.15■■□□□ 1.14
PSMD13-202ENST00000382671 TMC1Q8TDI8 760 aa22.15■■□□□ 1.14
PSMD13-202ENST00000382671 SOCS7O14512 581 aa22.14■■□□□ 1.13
PSMD13-202ENST00000382671 RXRBP28702 533 aa22.14■■□□□ 1.13
PSMD13-202ENST00000382671 SLC12A5Q9H2X9 1139 aa22.14■■□□□ 1.13
PSMD13-202ENST00000382671 ATRNO75882 1429 aa22.14■■□□□ 1.13
PSMD13-202ENST00000382671 USP19O94966 1318 aa22.13■■□□□ 1.13
PSMD13-202ENST00000382671 TTC21BQ7Z4L5 1316 aa22.13■■□□□ 1.13
PSMD13-202ENST00000382671 NLRP13Q86W25 1043 aa22.13■■□□□ 1.13
PSMD13-202ENST00000382671 TRPC5Q9UL62 973 aaPredicted RBP22.13■■□□□ 1.13
PSMD13-202ENST00000382671 FAM83GA6ND36 823 aa22.12■■□□□ 1.13
PSMD13-202ENST00000382671 TTC21AQ8NDW8 1320 aa22.12■■□□□ 1.13
PSMD13-202ENST00000382671 CDK12Q9NYV4 1490 aaPredicted RBP22.12■■□□□ 1.13
PSMD13-202ENST00000382671 NRAPQ86VF7 1730 aa22.11■■□□□ 1.13
PSMD13-202ENST00000382671 RBM6P78332 1123 aaKnown RBP22.11■■□□□ 1.13
PSMD13-202ENST00000382671 HDGFL2Q7Z4V5 671 aaPredicted RBP22.11■■□□□ 1.13
PSMD13-202ENST00000382671 EIF4G2P78344 907 aaKnown RBP eCLIP22.1■■□□□ 1.136e-6■■■■□ 25.1
PSMD13-202ENST00000382671 CDCA8Q53HL2 280 aa22.1■■□□□ 1.13
PSMD13-202ENST00000382671 UNC5CLQ8IV45 518 aa22.1■■□□□ 1.13
PSMD13-202ENST00000382671 TERF2IPQ9NYB0 399 aa22.1■■□□□ 1.13
PSMD13-202ENST00000382671 USP54Q70EL1 1684 aa22.1■■□□□ 1.13
PSMD13-202ENST00000382671 SLIT3O75094 1523 aa22.09■■□□□ 1.13
PSMD13-202ENST00000382671 A0A1W2PP64 1363 aa22.09■■□□□ 1.13
PSMD13-202ENST00000382671 NLRP6P59044 892 aa22.09■■□□□ 1.13
PSMD13-202ENST00000382671 MYOM1P52179 1685 aa22.08■■□□□ 1.12
PSMD13-202ENST00000382671 KIAA0232Q92628 1395 aa22.07■■□□□ 1.12
PSMD13-202ENST00000382671 EDC4Q6P2E9 1401 aaKnown RBP22.07■■□□□ 1.12
PSMD13-202ENST00000382671 PRDM11Q9NQV5 511 aa22.07■■□□□ 1.12
PSMD13-202ENST00000382671 GCP02774 474 aa22.06■■□□□ 1.12
PSMD13-202ENST00000382671 HSPA5P11021 654 aaKnown RBP22.06■■□□□ 1.12
PSMD13-202ENST00000382671 CPDO75976 1380 aa22.06■■□□□ 1.12
PSMD13-202ENST00000382671 ZC3H6P61129 1189 aaKnown RBP22.05■■□□□ 1.12
PSMD13-202ENST00000382671 BTG4Q9NY30 223 aa22.04■■□□□ 1.12
PSMD13-202ENST00000382671 LMO7Q8WWI1 1683 aa22.04■■□□□ 1.12
PSMD13-202ENST00000382671 GLI3P10071 1580 aa22.04■■□□□ 1.12
PSMD13-202ENST00000382671 ANKRD36BQ8N2N9 1353 aa22.03■■□□□ 1.12
PSMD13-202ENST00000382671 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.03■■□□□ 1.12
PSMD13-202ENST00000382671 GJD4Q96KN9 370 aaPredicted RBP22.03■■□□□ 1.12
PSMD13-202ENST00000382671 RGS12O14924 1447 aa22.03■■□□□ 1.12
PSMD13-202ENST00000382671 USP31Q70CQ4 1352 aa22.03■■□□□ 1.12
PSMD13-202ENST00000382671 VPS72Q15906 364 aa22.03■■□□□ 1.12
PSMD13-202ENST00000382671 CHRNA2Q15822 529 aa22.01■■□□□ 1.11
PSMD13-202ENST00000382671 COL18A1P39060 1754 aa21.99■■□□□ 1.11
PSMD13-202ENST00000382671 NFAT5O94916 1531 aa21.99■■□□□ 1.11
PSMD13-202ENST00000382671 NME9Q86XW9 330 aa21.99■■□□□ 1.11
PSMD13-202ENST00000382671 KCNH5Q8NCM2 988 aa21.99■■□□□ 1.11
PSMD13-202ENST00000382671 CAMTA1Q9Y6Y1 1673 aa21.98■■□□□ 1.11
PSMD13-202ENST00000382671 ZRANB1Q9UGI0 708 aa21.97■■□□□ 1.11
PSMD13-202ENST00000382671 RGPD5Q99666 1765 aa21.97■■□□□ 1.11
PSMD13-202ENST00000382671 KIF20BQ96Q89 1820 aa21.96■■□□□ 1.11
PSMD13-202ENST00000382671 LTN1O94822 1766 aa21.96■■□□□ 1.11
PSMD13-202ENST00000382671 AATKQ6ZMQ8 1374 aa21.95■■□□□ 1.11
PSMD13-202ENST00000382671 BRWD3Q6RI45 1802 aa21.95■■□□□ 1.1
PSMD13-202ENST00000382671 OVOS2A0A0J9YW53 1432 aa21.95■■□□□ 1.1
PSMD13-202ENST00000382671 OVOS2Q6IE36 1432 aa21.95■■□□□ 1.1
PSMD13-202ENST00000382671 CCDC9Q9Y3X0 531 aaKnown RBP21.95■■□□□ 1.1
PSMD13-202ENST00000382671 ARHGEF25Q86VW2 580 aa21.93■■□□□ 1.1
PSMD13-202ENST00000382671 SPATA31A5Q5VU36 1347 aa21.93■■□□□ 1.1
PSMD13-202ENST00000382671 SPATA31A7Q8IWB4 1347 aa21.93■■□□□ 1.1
PSMD13-202ENST00000382671 ABCC6O95255 1503 aa21.92■■□□□ 1.1
PSMD13-202ENST00000382671 ONECUT3O60422 494 aaPredicted RBP21.91■■□□□ 1.1
PSMD13-202ENST00000382671 STRN4Q9NRL3 753 aa21.91■■□□□ 1.1
PSMD13-202ENST00000382671 COL5A2P05997 1499 aaPredicted RBP21.91■■□□□ 1.1
PSMD13-202ENST00000382671 ZBTB7CA1YPR0 619 aa21.9■■□□□ 1.1
PSMD13-202ENST00000382671 SOX12O15370 315 aa21.9■■□□□ 1.1
PSMD13-202ENST00000382671 EVA1CP58658 441 aa21.9■■□□□ 1.1
PSMD13-202ENST00000382671 POLR3GLQ9BT43 218 aa21.9■■□□□ 1.1
PSMD13-202ENST00000382671 C11orf95C9JLR9 678 aaPredicted RBP21.89■■□□□ 1.09
PSMD13-202ENST00000382671 COG3Q96JB2 828 aa21.89■■□□□ 1.09
PSMD13-202ENST00000382671 CARD14Q9BXL6 1004 aa21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms