RNA–Protein interactions for RNA: ENST00000382227.7

TMEM41A-202, Transcript of transmembrane protein 41A, humanhuman

TSL 4

Gene TMEM41A, Length 541 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM41A-202ENST00000382227 ITSN1Q15811 1721 aa27.24■■□□□ 1.95
TMEM41A-202ENST00000382227 CDK19Q9BWU1 502 aa27.23■■□□□ 1.95
TMEM41A-202ENST00000382227 NRAPQ86VF7 1730 aa27.23■■□□□ 1.95
TMEM41A-202ENST00000382227 KIAA1210Q9ULL0 1709 aa27.23■■□□□ 1.95
TMEM41A-202ENST00000382227 COL14A1Q05707 1796 aaKnown RBP27.22■■□□□ 1.95
TMEM41A-202ENST00000382227 KRT27Q7Z3Y8 459 aa27.21■■□□□ 1.95
TMEM41A-202ENST00000382227 CRYBG1Q9Y4K1 1723 aa27.2■■□□□ 1.94
TMEM41A-202ENST00000382227 A0A0G2JS52 829 aa27.18■■□□□ 1.94
TMEM41A-202ENST00000382227 MYT1Q01538 1121 aa27.18■■□□□ 1.94
TMEM41A-202ENST00000382227 FAM98CQ17RN3 349 aaKnown RBP27.18■■□□□ 1.94
TMEM41A-202ENST00000382227 NBPF1Q3BBV0 1214 aa27.18■■□□□ 1.94
TMEM41A-202ENST00000382227 PRDM11Q9NQV5 511 aa27.18■■□□□ 1.94
TMEM41A-202ENST00000382227 CCDC61Q9Y6R9 512 aa27.18■■□□□ 1.94
TMEM41A-202ENST00000382227 SF3B2Q13435 895 aaKnown RBP27.17■■□□□ 1.94
TMEM41A-202ENST00000382227 POLR3AO14802 1390 aaPredicted RBP27.17■■□□□ 1.94
TMEM41A-202ENST00000382227 TOPAZ1Q8N9V7 1692 aa27.15■■□□□ 1.94
TMEM41A-202ENST00000382227 DEFB132Q7Z7B7 95 aa27.15■■□□□ 1.94
TMEM41A-202ENST00000382227 ACEP12821 1306 aa27.15■■□□□ 1.94
TMEM41A-202ENST00000382227 SPATA31A5Q5VU36 1347 aa27.15■■□□□ 1.94
TMEM41A-202ENST00000382227 SPATA31A7Q8IWB4 1347 aa27.15■■□□□ 1.94
TMEM41A-202ENST00000382227 PLEKHG3A1L390 1219 aa27.13■■□□□ 1.93
TMEM41A-202ENST00000382227 NBPF8Q3BBV2 869 aa27.13■■□□□ 1.93
TMEM41A-202ENST00000382227 KIAA0232Q92628 1395 aa27.12■■□□□ 1.93
TMEM41A-202ENST00000382227 NUTM2GQ5VZR2 741 aa27.11■■□□□ 1.93
TMEM41A-202ENST00000382227 CENPJQ9HC77 1338 aaPredicted RBP27.1■■□□□ 1.93
TMEM41A-202ENST00000382227 PHRF1Q9P1Y6 1649 aaKnown RBP27.09■■□□□ 1.93
TMEM41A-202ENST00000382227 CHRNA2Q15822 529 aa27.08■■□□□ 1.93
TMEM41A-202ENST00000382227 ZC3H6P61129 1189 aaKnown RBP27.07■■□□□ 1.92
TMEM41A-202ENST00000382227 SRPK2P78362 688 aaKnown RBP27.07■■□□□ 1.92
TMEM41A-202ENST00000382227 ABTB2Q8N961 1025 aa27.05■■□□□ 1.92
TMEM41A-202ENST00000382227 PPIP5K1Q6PFW1 1433 aa27.05■■□□□ 1.92
TMEM41A-202ENST00000382227 THSD7AQ9UPZ6 1657 aa27.05■■□□□ 1.92
TMEM41A-202ENST00000382227 L3MBTL2Q969R5 705 aa27.04■■□□□ 1.92
TMEM41A-202ENST00000382227 STRN4Q9NRL3 753 aa27.04■■□□□ 1.92
TMEM41A-202ENST00000382227 SPATA31A1Q5TZJ5 1347 aa27.04■■□□□ 1.92
TMEM41A-202ENST00000382227 BAG6P46379 1132 aa27.03■■□□□ 1.92
TMEM41A-202ENST00000382227 CABP2Q9NPB3 220 aa27.03■■□□□ 1.92
TMEM41A-202ENST00000382227 FAM182BQ5T319 152 aa27.01■■□□□ 1.91
TMEM41A-202ENST00000382227 NRKQ7Z2Y5 1582 aa27.01■■□□□ 1.91
TMEM41A-202ENST00000382227 USP19O94966 1318 aa27■■□□□ 1.91
TMEM41A-202ENST00000382227 SRCAPQ6ZRS2 3230 aa27■■□□□ 1.91
TMEM41A-202ENST00000382227 QRICH2Q9H0J4 1663 aa26.99■■□□□ 1.91
TMEM41A-202ENST00000382227 CPDO75976 1380 aa26.98■■□□□ 1.91
TMEM41A-202ENST00000382227 EVA1CP58658 441 aa26.98■■□□□ 1.91
TMEM41A-202ENST00000382227 NLRP13Q86W25 1043 aa26.98■■□□□ 1.91
TMEM41A-202ENST00000382227 BRD4O60885 1362 aaPredicted RBP26.97■■□□□ 1.91
TMEM41A-202ENST00000382227 SIN3AQ96ST3 1273 aa26.97■■□□□ 1.91
TMEM41A-202ENST00000382227 SSH2Q76I76 1423 aa26.97■■□□□ 1.91
TMEM41A-202ENST00000382227 CAMTA1Q9Y6Y1 1673 aa26.95■■□□□ 1.91
TMEM41A-202ENST00000382227 GCP02774 474 aa26.95■■□□□ 1.9
TMEM41A-202ENST00000382227 CABP1Q9NZU7 370 aa26.95■■□□□ 1.9
TMEM41A-202ENST00000382227 USP35Q9P2H5 1018 aa26.95■■□□□ 1.9
TMEM41A-202ENST00000382227 RGPD1P0DJD0 1748 aa26.95■■□□□ 1.9
TMEM41A-202ENST00000382227 USP6P35125 1406 aa26.93■■□□□ 1.9
TMEM41A-202ENST00000382227 LMO7Q8WWI1 1683 aa26.93■■□□□ 1.9
TMEM41A-202ENST00000382227 EN1Q05925 392 aaPredicted RBP26.93■■□□□ 1.9
TMEM41A-202ENST00000382227 BARGINQ6ZT62 677 aa26.93■■□□□ 1.9
TMEM41A-202ENST00000382227 TRPM1Q7Z4N2 1603 aa26.93■■□□□ 1.9
TMEM41A-202ENST00000382227 LARP1Q6PKG0 1096 aaKnown RBP26.92■■□□□ 1.9
TMEM41A-202ENST00000382227 FAM196AQ6ZSG2 479 aa26.92■■□□□ 1.9
TMEM41A-202ENST00000382227 EVC2Q86UK5 1308 aa26.91■■□□□ 1.9
TMEM41A-202ENST00000382227 DISP2A7MBM2 1401 aa26.91■■□□□ 1.9
TMEM41A-202ENST00000382227 NEUROD1Q13562 356 aa26.91■■□□□ 1.9
TMEM41A-202ENST00000382227 ROCK2O75116 1388 aaKnown RBP26.9■■□□□ 1.9
TMEM41A-202ENST00000382227 TCP11L2Q8N4U5 519 aa26.89■■□□□ 1.9
TMEM41A-202ENST00000382227 NLRP6P59044 892 aa26.88■■□□□ 1.89
TMEM41A-202ENST00000382227 TNS1Q9HBL0 1735 aaKnown RBP26.87■■□□□ 1.89
TMEM41A-202ENST00000382227 PSDA5PKW4 1024 aaPredicted RBP26.87■■□□□ 1.89
TMEM41A-202ENST00000382227 TRIM37O94972 964 aa26.86■■□□□ 1.89
TMEM41A-202ENST00000382227 PDE3BQ13370 1112 aa26.86■■□□□ 1.89
TMEM41A-202ENST00000382227 THRAP3Q9Y2W1 955 aaKnown RBP26.86■■□□□ 1.89
TMEM41A-202ENST00000382227 COL5A2P05997 1499 aaPredicted RBP26.86■■□□□ 1.89
TMEM41A-202ENST00000382227 SLIT3O75094 1523 aa26.84■■□□□ 1.89
TMEM41A-202ENST00000382227 LRP5O75197 1615 aa26.83■■□□□ 1.89
TMEM41A-202ENST00000382227 AATKQ6ZMQ8 1374 aa26.83■■□□□ 1.88
TMEM41A-202ENST00000382227 ZBTB7CA1YPR0 619 aa26.82■■□□□ 1.88
TMEM41A-202ENST00000382227 EZH2Q15910 746 aaKnown RBP26.82■■□□□ 1.88
TMEM41A-202ENST00000382227 CAMKK2Q96RR4 588 aa26.81■■□□□ 1.88
TMEM41A-202ENST00000382227 ZNF692Q9BU19 519 aaPredicted RBP26.81■■□□□ 1.88
TMEM41A-202ENST00000382227 PIK3C2AO00443 1686 aa26.81■■□□□ 1.88
TMEM41A-202ENST00000382227 CRB1P82279 1406 aa26.81■■□□□ 1.88
TMEM41A-202ENST00000382227 APBA3O96018 575 aa26.79■■□□□ 1.88
TMEM41A-202ENST00000382227 R3HDM1Q15032 1099 aaKnown RBP26.78■■□□□ 1.88
TMEM41A-202ENST00000382227 TTC21BQ7Z4L5 1316 aa26.78■■□□□ 1.88
TMEM41A-202ENST00000382227 PARD3Q8TEW0 1356 aa26.78■■□□□ 1.88
TMEM41A-202ENST00000382227 PARP4Q9UKK3 1724 aaKnown RBP26.76■■□□□ 1.87
TMEM41A-202ENST00000382227 CPSF1Q10570 1443 aaKnown RBP26.74■■□□□ 1.87
TMEM41A-202ENST00000382227 TTC21AQ8NDW8 1320 aa26.74■■□□□ 1.87
TMEM41A-202ENST00000382227 AKAP12Q02952 1782 aa26.74■■□□□ 1.87
TMEM41A-202ENST00000382227 TOM1L2Q6ZVM7 507 aa26.73■■□□□ 1.87
TMEM41A-202ENST00000382227 KCNH5Q8NCM2 988 aa26.73■■□□□ 1.87
TMEM41A-202ENST00000382227 AXIN2Q9Y2T1 843 aa26.73■■□□□ 1.87
TMEM41A-202ENST00000382227 COL18A1P39060 1754 aa26.73■■□□□ 1.87
TMEM41A-202ENST00000382227 SBNO2Q9Y2G9 1366 aa26.72■■□□□ 1.87
TMEM41A-202ENST00000382227 ARHGEF25Q86VW2 580 aa26.72■■□□□ 1.87
TMEM41A-202ENST00000382227 KTN1Q86UP2 1357 aaKnown RBP26.71■■□□□ 1.87
TMEM41A-202ENST00000382227 C11orf95C9JLR9 678 aaPredicted RBP26.71■■□□□ 1.87
TMEM41A-202ENST00000382227 WDR17Q8IZU2 1322 aa26.7■■□□□ 1.87
TMEM41A-202ENST00000382227 CARD11Q9BXL7 1154 aa26.7■■□□□ 1.86
TMEM41A-202ENST00000382227 OVOS2A0A0G2JMS6 1433 aa26.68■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms