RNA–Protein interactions for RNA: ENST00000382096.5

VLDLR-201, Transcript of very low density lipoprotein receptor, humanhuman

TSL 5

Gene VLDLR, Length 736 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-201ENST00000382096 MINK1Q8N4C8 1332 aaPredicted RBP33.28■■■□□ 2.92
VLDLR-201ENST00000382096 BTG4Q9NY30 223 aa33.28■■■□□ 2.92
VLDLR-201ENST00000382096 THSD7AQ9UPZ6 1657 aa33.26■■■□□ 2.92
VLDLR-201ENST00000382096 WASLO00401 505 aaPredicted RBP33.25■■■□□ 2.91
VLDLR-201ENST00000382096 FAM98CQ17RN3 349 aaKnown RBP33.25■■■□□ 2.91
VLDLR-201ENST00000382096 A0A0G2JS52 829 aa33.24■■■□□ 2.91
VLDLR-201ENST00000382096 MYT1Q01538 1121 aa33.24■■■□□ 2.91
VLDLR-201ENST00000382096 PHRF1Q9P1Y6 1649 aaKnown RBP33.22■■■□□ 2.91
VLDLR-201ENST00000382096 DCAF11Q8TEB1 546 aa33.22■■■□□ 2.91
VLDLR-201ENST00000382096 STAC3Q96MF2 364 aa33.22■■■□□ 2.91
VLDLR-201ENST00000382096 ATP7BP35670 1465 aa33.21■■■□□ 2.91
VLDLR-201ENST00000382096 TNS1Q9HBL0 1735 aaKnown RBP33.2■■■□□ 2.91
VLDLR-201ENST00000382096 BAG6P46379 1132 aa33.2■■■□□ 2.91
VLDLR-201ENST00000382096 KDM2AQ9Y2K7 1162 aa33.2■■■□□ 2.91
VLDLR-201ENST00000382096 SPATA31A5Q5VU36 1347 aa33.2■■■□□ 2.91
VLDLR-201ENST00000382096 SPATA31A7Q8IWB4 1347 aa33.2■■■□□ 2.91
VLDLR-201ENST00000382096 NGDNQ8NEJ9 315 aaKnown RBP33.18■■■□□ 2.9
VLDLR-201ENST00000382096 TOPAZ1Q8N9V7 1692 aa33.17■■■□□ 2.9
VLDLR-201ENST00000382096 PAK3O75914 559 aaPredicted RBP33.14■■■□□ 2.9
VLDLR-201ENST00000382096 PRDM11Q9NQV5 511 aa33.13■■■□□ 2.89
VLDLR-201ENST00000382096 DISP2A7MBM2 1401 aa33.12■■■□□ 2.89
VLDLR-201ENST00000382096 KIAA1210Q9ULL0 1709 aa33.11■■■□□ 2.89
VLDLR-201ENST00000382096 NUDT16Q96DE0 195 aaKnown RBP33.09■■■□□ 2.89
VLDLR-201ENST00000382096 KIAA0232Q92628 1395 aa33.09■■■□□ 2.89
VLDLR-201ENST00000382096 PSDA5PKW4 1024 aaPredicted RBP33.08■■■□□ 2.89
VLDLR-201ENST00000382096 FAM182BQ5T319 152 aa33.08■■■□□ 2.89
VLDLR-201ENST00000382096 SPATA31A1Q5TZJ5 1347 aa33.06■■■□□ 2.88
VLDLR-201ENST00000382096 EN1Q05925 392 aaPredicted RBP33.06■■■□□ 2.88
VLDLR-201ENST00000382096 POLR3AO14802 1390 aaPredicted RBP33.06■■■□□ 2.88
VLDLR-201ENST00000382096 NRKQ7Z2Y5 1582 aa33.04■■■□□ 2.88
VLDLR-201ENST00000382096 CHRNA2Q15822 529 aa33■■■□□ 2.87
VLDLR-201ENST00000382096 CDK19Q9BWU1 502 aa33■■■□□ 2.87
VLDLR-201ENST00000382096 LMO7Q8WWI1 1683 aa33■■■□□ 2.87
VLDLR-201ENST00000382096 ACEP12821 1306 aa32.97■■■□□ 2.87
VLDLR-201ENST00000382096 ZC3H6P61129 1189 aaKnown RBP32.96■■■□□ 2.87
VLDLR-201ENST00000382096 STRN4Q9NRL3 753 aa32.96■■■□□ 2.87
VLDLR-201ENST00000382096 CCDC61Q9Y6R9 512 aa32.96■■■□□ 2.87
VLDLR-201ENST00000382096 SSH2Q76I76 1423 aa32.95■■■□□ 2.87
VLDLR-201ENST00000382096 RREB1Q92766 1687 aa32.95■■■□□ 2.87
VLDLR-201ENST00000382096 FAM196AQ6ZSG2 479 aa32.95■■■□□ 2.87
VLDLR-201ENST00000382096 CAMTA1Q9Y6Y1 1673 aa32.94■■■□□ 2.86
VLDLR-201ENST00000382096 PLEKHG3A1L390 1219 aa32.94■■■□□ 2.86
VLDLR-201ENST00000382096 NBPF8Q3BBV2 869 aa32.94■■■□□ 2.86
VLDLR-201ENST00000382096 NUTM2GQ5VZR2 741 aa32.94■■■□□ 2.86
VLDLR-201ENST00000382096 R3HDM1Q15032 1099 aaKnown RBP32.93■■■□□ 2.86
VLDLR-201ENST00000382096 EZH2Q15910 746 aaKnown RBP32.92■■■□□ 2.86
VLDLR-201ENST00000382096 CPDO75976 1380 aa32.92■■■□□ 2.86
VLDLR-201ENST00000382096 BARGINQ6ZT62 677 aa32.91■■■□□ 2.86
VLDLR-201ENST00000382096 PARD3Q8TEW0 1356 aa32.91■■■□□ 2.86
VLDLR-201ENST00000382096 TRIM37O94972 964 aa32.9■■■□□ 2.86
VLDLR-201ENST00000382096 CAMKK2Q96RR4 588 aa32.9■■■□□ 2.86
VLDLR-201ENST00000382096 USP19O94966 1318 aa32.9■■■□□ 2.86
VLDLR-201ENST00000382096 NUP188Q5SRE5 1749 aa32.9■■■□□ 2.86
VLDLR-201ENST00000382096 PARP4Q9UKK3 1724 aaKnown RBP32.88■■■□□ 2.85
VLDLR-201ENST00000382096 ABTB2Q8N961 1025 aa32.87■■■□□ 2.85
VLDLR-201ENST00000382096 USP35Q9P2H5 1018 aa32.87■■■□□ 2.85
VLDLR-201ENST00000382096 QRICH2Q9H0J4 1663 aa32.86■■■□□ 2.85
VLDLR-201ENST00000382096 EVA1CP58658 441 aa32.86■■■□□ 2.85
VLDLR-201ENST00000382096 PPIP5K1Q6PFW1 1433 aa32.84■■■□□ 2.85
VLDLR-201ENST00000382096 LARP1Q6PKG0 1096 aaKnown RBP32.83■■■□□ 2.85
VLDLR-201ENST00000382096 APBA3O96018 575 aa32.82■■■□□ 2.84
VLDLR-201ENST00000382096 PDE3BQ13370 1112 aa32.81■■■□□ 2.84
VLDLR-201ENST00000382096 NBPF1Q3BBV0 1214 aa32.81■■■□□ 2.84
VLDLR-201ENST00000382096 TCP11L2Q8N4U5 519 aa32.81■■■□□ 2.84
VLDLR-201ENST00000382096 COL5A2P05997 1499 aaPredicted RBP32.8■■■□□ 2.84
VLDLR-201ENST00000382096 BRD4O60885 1362 aaPredicted RBP32.8■■■□□ 2.84
VLDLR-201ENST00000382096 NLRP13Q86W25 1043 aa32.79■■■□□ 2.84
VLDLR-201ENST00000382096 THRAP3Q9Y2W1 955 aaKnown RBP32.79■■■□□ 2.84
VLDLR-201ENST00000382096 CENPJQ9HC77 1338 aaPredicted RBP32.77■■■□□ 2.84
VLDLR-201ENST00000382096 GCP02774 474 aa32.77■■■□□ 2.84
VLDLR-201ENST00000382096 SRPK2P78362 688 aaKnown RBP32.77■■■□□ 2.84
VLDLR-201ENST00000382096 PEAK1Q9H792 1746 aa32.77■■■□□ 2.84
VLDLR-201ENST00000382096 SBF2Q86WG5 1849 aa32.76■■■□□ 2.83
VLDLR-201ENST00000382096 RGPD3A6NKT7 1758 aaPredicted RBP32.75■■■□□ 2.83
VLDLR-201ENST00000382096 RGPD4Q7Z3J3 1758 aa32.75■■■□□ 2.83
VLDLR-201ENST00000382096 SLIT3O75094 1523 aa32.75■■■□□ 2.83
VLDLR-201ENST00000382096 WNK3Q9BYP7 1800 aa32.74■■■□□ 2.83
VLDLR-201ENST00000382096 USP6P35125 1406 aa32.73■■■□□ 2.83
VLDLR-201ENST00000382096 CRB1P82279 1406 aa32.73■■■□□ 2.83
VLDLR-201ENST00000382096 LRRC37A3O60309 1634 aa32.73■■■□□ 2.83
VLDLR-201ENST00000382096 PIK3C2AO00443 1686 aa32.72■■■□□ 2.83
VLDLR-201ENST00000382096 CABP2Q9NPB3 220 aa32.72■■■□□ 2.83
VLDLR-201ENST00000382096 COL18A1P39060 1754 aa32.72■■■□□ 2.83
VLDLR-201ENST00000382096 AATKQ6ZMQ8 1374 aa32.68■■■□□ 2.82
VLDLR-201ENST00000382096 C11orf95C9JLR9 678 aaPredicted RBP32.67■■■□□ 2.82
VLDLR-201ENST00000382096 OVOS2A0A0G2JMS6 1433 aa32.67■■■□□ 2.82
VLDLR-201ENST00000382096 OVOS2A0A0J9YW53 1432 aa32.67■■■□□ 2.82
VLDLR-201ENST00000382096 OVOS2Q6IE36 1432 aa32.67■■■□□ 2.82
VLDLR-201ENST00000382096 NBPF14Q5TI25 921 aa32.66■■■□□ 2.82
VLDLR-201ENST00000382096 TRPM1Q7Z4N2 1603 aa32.65■■■□□ 2.82
VLDLR-201ENST00000382096 AKAP12Q02952 1782 aa32.65■■■□□ 2.82
VLDLR-201ENST00000382096 CABP1Q9NZU7 370 aa32.64■■■□□ 2.82
VLDLR-201ENST00000382096 RGPD5Q99666 1765 aa32.63■■■□□ 2.81
VLDLR-201ENST00000382096 NLRP6P59044 892 aa32.63■■■□□ 2.81
VLDLR-201ENST00000382096 L3MBTL2Q969R5 705 aa32.63■■■□□ 2.81
VLDLR-201ENST00000382096 ZBTB7CA1YPR0 619 aa32.57■■■□□ 2.8
VLDLR-201ENST00000382096 CPSF1Q10570 1443 aaKnown RBP32.57■■■□□ 2.8
VLDLR-201ENST00000382096 SIN3AQ96ST3 1273 aa32.56■■■□□ 2.8
VLDLR-201ENST00000382096 EVC2Q86UK5 1308 aa32.55■■■□□ 2.8
VLDLR-201ENST00000382096 DDB1Q16531 1140 aa32.55■■■□□ 2.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms