RNA–Protein interactions for RNA: ENST00000381254.6

GEN1-202, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

APPRIS P1 TSL 5 BASIC

Gene GEN1, Length 6,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-202ENST00000381254 FANCIQ9NVI1 1328 aa6.96□□□□□ -1.3
GEN1-202ENST00000381254 PLEKHG1Q9ULL1 1385 aa6.95□□□□□ -1.3
GEN1-202ENST00000381254 FTSJ3Q8IY81 847 aaKnown RBP6.95□□□□□ -1.3
GEN1-202ENST00000381254 ANKRD50Q9ULJ7 1429 aa6.95□□□□□ -1.3
GEN1-202ENST00000381254 MED1Q15648 1581 aaPredicted RBP6.95□□□□□ -1.3
GEN1-202ENST00000381254 ZBED9Q6R2W3 1325 aa6.95□□□□□ -1.3
GEN1-202ENST00000381254 PZPP20742 1482 aa6.95□□□□□ -1.3
GEN1-202ENST00000381254 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.95□□□□□ -1.3
GEN1-202ENST00000381254 ZRSR1Q15695 479 aaKnown RBP6.95□□□□□ -1.3
GEN1-202ENST00000381254 SYAP1Q96A49 352 aaPredicted RBP6.95□□□□□ -1.3
GEN1-202ENST00000381254 GOLGA2Q08379 1002 aa6.95□□□□□ -1.3
GEN1-202ENST00000381254 VPS72Q15906 364 aa6.95□□□□□ -1.3
GEN1-202ENST00000381254 TTC5Q8N0Z6 440 aa6.95□□□□□ -1.3
GEN1-202ENST00000381254 CCDC34Q96HJ3 373 aa6.95□□□□□ -1.3
GEN1-202ENST00000381254 SPG7Q9UQ90 795 aa6.95□□□□□ -1.3
GEN1-202ENST00000381254 HFM1A2PYH4 1435 aa6.94□□□□□ -1.3
GEN1-202ENST00000381254 ARHGEF6Q15052 776 aa6.94□□□□□ -1.3
GEN1-202ENST00000381254 NINLQ9Y2I6 1382 aa6.94□□□□□ -1.3
GEN1-202ENST00000381254 CSPP1Q1MSJ5 1256 aa6.94□□□□□ -1.3
GEN1-202ENST00000381254 RBM42Q9BTD8 480 aaKnown RBP6.94□□□□□ -1.3
GEN1-202ENST00000381254 FCHSD2O94868 740 aa6.94□□□□□ -1.3
GEN1-202ENST00000381254 ZBTB7AO95365 584 aa6.94□□□□□ -1.3
GEN1-202ENST00000381254 DEFB132Q7Z7B7 95 aa6.94□□□□□ -1.3
GEN1-202ENST00000381254 ZNF692Q9BU19 519 aaPredicted RBP6.94□□□□□ -1.3
GEN1-202ENST00000381254 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.94□□□□□ -1.3
GEN1-202ENST00000381254 AATKQ6ZMQ8 1374 aa6.94□□□□□ -1.3
GEN1-202ENST00000381254 PTCH1Q13635 1447 aa6.94□□□□□ -1.3
GEN1-202ENST00000381254 NCOA3Q9Y6Q9 1424 aa6.94□□□□□ -1.3
GEN1-202ENST00000381254 HSP90AB1P08238 724 aaKnown RBP6.94□□□□□ -1.3
GEN1-202ENST00000381254 RFC4P35249 363 aa6.94□□□□□ -1.3
GEN1-202ENST00000381254 APLP1P51693 650 aa6.94□□□□□ -1.3
GEN1-202ENST00000381254 MPHOSPH9Q99550 1183 aa6.94□□□□□ -1.3
GEN1-202ENST00000381254 DUOX2Q9NRD8 1548 aa6.94□□□□□ -1.3
GEN1-202ENST00000381254 GPATCH8Q9UKJ3 1502 aaKnown RBP6.94□□□□□ -1.3
GEN1-202ENST00000381254 BCS1LQ9Y276 419 aa6.94□□□□□ -1.3
GEN1-202ENST00000381254 EFCAB6Q5THR3 1501 aa6.93□□□□□ -1.3
GEN1-202ENST00000381254 LTKP29376 864 aa6.93□□□□□ -1.3
GEN1-202ENST00000381254 THRAP3Q9Y2W1 955 aaKnown RBP6.93□□□□□ -1.3
GEN1-202ENST00000381254 CNGB1Q14028 1251 aaPredicted RBP6.93□□□□□ -1.3
GEN1-202ENST00000381254 HSCBQ8IWL3 235 aa6.93□□□□□ -1.3
GEN1-202ENST00000381254 SKOR2Q2VWA4 1001 aaPredicted RBP6.93□□□□□ -1.3
GEN1-202ENST00000381254 MYBBP1AQ9BQG0 1328 aaKnown RBP6.93□□□□□ -1.3
GEN1-202ENST00000381254 PRAM1Q96QH2 718 aa6.93□□□□□ -1.3
GEN1-202ENST00000381254 ERBINQ96RT1 1412 aa6.93□□□□□ -1.3
GEN1-202ENST00000381254 ZMYM4Q5VZL5 1548 aa6.92□□□□□ -1.3
GEN1-202ENST00000381254 ARHGEF12Q9NZN5 1544 aa6.92□□□□□ -1.3
GEN1-202ENST00000381254 HMMRO75330 724 aa6.92□□□□□ -1.3
GEN1-202ENST00000381254 SAMD9Q5K651 1589 aa6.92□□□□□ -1.3
GEN1-202ENST00000381254 ITSN2Q9NZM3 1697 aa6.92□□□□□ -1.3
GEN1-202ENST00000381254 PDIA4P13667 645 aaKnown RBP6.92□□□□□ -1.3
GEN1-202ENST00000381254 CHAF1AQ13111 956 aaPredicted RBP6.92□□□□□ -1.3
GEN1-202ENST00000381254 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.92□□□□□ -1.3
GEN1-202ENST00000381254 CAMSAP2Q08AD1 1489 aa6.92□□□□□ -1.3
GEN1-202ENST00000381254 KIF3AQ9Y496 699 aa6.92□□□□□ -1.3
GEN1-202ENST00000381254 KDM5CP41229 1560 aa6.92□□□□□ -1.3
GEN1-202ENST00000381254 PHF14O94880 888 aa6.92□□□□□ -1.3
GEN1-202ENST00000381254 RTF1Q92541 710 aaKnown RBP6.92□□□□□ -1.3
GEN1-202ENST00000381254 HSPA5P11021 654 aaKnown RBP6.91□□□□□ -1.3
GEN1-202ENST00000381254 CDK11BP21127 795 aaKnown RBP6.91□□□□□ -1.3
GEN1-202ENST00000381254 SLC16A10Q8TF71 515 aa6.91□□□□□ -1.3
GEN1-202ENST00000381254 ZNF219Q9P2Y4 722 aaPredicted RBP6.91□□□□□ -1.3
GEN1-202ENST00000381254 CHRNA2Q15822 529 aa6.91□□□□□ -1.3
GEN1-202ENST00000381254 TRPM2O94759 1503 aa6.9□□□□□ -1.3
GEN1-202ENST00000381254 CT47B1P0C2W7 299 aaPredicted RBP6.9□□□□□ -1.3
GEN1-202ENST00000381254 TTLL12Q14166 644 aaPredicted RBP6.9□□□□□ -1.3
GEN1-202ENST00000381254 CABLES1Q8TDN4 633 aa6.9□□□□□ -1.3
GEN1-202ENST00000381254 ACSBG1Q96GR2 724 aa6.9□□□□□ -1.3
GEN1-202ENST00000381254 MTFR1LQ9H019 292 aa6.9□□□□□ -1.3
GEN1-202ENST00000381254 CCNL1Q9UK58 526 aaPredicted RBP6.9□□□□□ -1.3
GEN1-202ENST00000381254 RCAN3Q9UKA8 241 aa6.9□□□□□ -1.3
GEN1-202ENST00000381254 HDAC9Q9UKV0 1011 aa6.9□□□□□ -1.3
GEN1-202ENST00000381254 DHX8Q14562 1220 aaKnown RBP6.9□□□□□ -1.3
GEN1-202ENST00000381254 NKTRP30414 1462 aaKnown RBP6.9□□□□□ -1.3
GEN1-202ENST00000381254 CENPQQ7L2Z9 268 aaPredicted RBP6.9□□□□□ -1.3
GEN1-202ENST00000381254 ABT1Q9ULW3 272 aaKnown RBP6.9□□□□□ -1.31
GEN1-202ENST00000381254 PARD3Q8TEW0 1356 aa6.9□□□□□ -1.31
GEN1-202ENST00000381254 TMOD3Q9NYL9 352 aa6.89□□□□□ -1.31
GEN1-202ENST00000381254 LTBP4Q8N2S1 1624 aa6.89□□□□□ -1.31
GEN1-202ENST00000381254 NSD3Q9BZ95 1437 aa6.89□□□□□ -1.31
GEN1-202ENST00000381254 RNF17Q9BXT8 1623 aaKnown RBP6.89□□□□□ -1.31
GEN1-202ENST00000381254 NF2P35240 595 aa6.89□□□□□ -1.31
GEN1-202ENST00000381254 JDP2Q8WYK2 163 aa6.89□□□□□ -1.31
GEN1-202ENST00000381254 ORAI2Q96SN7 254 aa6.89□□□□□ -1.31
GEN1-202ENST00000381254 USP47Q96K76 1375 aa6.89□□□□□ -1.31
GEN1-202ENST00000381254 ADAMTSL3P82987 1691 aa6.89□□□□□ -1.31
GEN1-202ENST00000381254 HSP90B1P14625 803 aaKnown RBP6.89□□□□□ -1.31
GEN1-202ENST00000381254 EZH2Q15910 746 aaKnown RBP6.89□□□□□ -1.31
GEN1-202ENST00000381254 IPO9Q96P70 1041 aaKnown RBP6.89□□□□□ -1.31
GEN1-202ENST00000381254 A0A087WZG4 1122 aa6.89□□□□□ -1.31
GEN1-202ENST00000381254 ZNF622Q969S3 477 aaKnown RBP eCLIP6.89□□□□□ -1.31
GEN1-202ENST00000381254 BRD4O60885 1362 aaPredicted RBP6.89□□□□□ -1.31
GEN1-202ENST00000381254 ZNF428Q96B54 188 aa6.88□□□□□ -1.31
GEN1-202ENST00000381254 BICDL1Q6ZP65 573 aa6.88□□□□□ -1.31
GEN1-202ENST00000381254 DDX17Q92841 729 aaKnown RBP6.88□□□□□ -1.31
GEN1-202ENST00000381254 ATP6V1DQ9Y5K8 247 aa6.88□□□□□ -1.31
GEN1-202ENST00000381254 DDX11L8A8MPP1 907 aa6.88□□□□□ -1.31
GEN1-202ENST00000381254 E9PSI1 815 aa6.88□□□□□ -1.31
GEN1-202ENST00000381254 SOGA3Q5TF21 947 aa6.88□□□□□ -1.31
GEN1-202ENST00000381254 MORC1Q86VD1 984 aa6.88□□□□□ -1.31
GEN1-202ENST00000381254 CDK19Q9BWU1 502 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms