RNA–Protein interactions for RNA: ENST00000381160.7

NPC1L1-202, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1L1, Length 4,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-202ENST00000381160 CSPP1Q1MSJ5 1256 aa13.74□□□□□ -0.21
NPC1L1-202ENST00000381160 BMP2KLQ5H9B9 411 aa13.74□□□□□ -0.21
NPC1L1-202ENST00000381160 CROCC2H7BZ55 1655 aa13.74□□□□□ -0.21
NPC1L1-202ENST00000381160 NPM1P06748 294 aaKnown RBP eCLIP13.74□□□□□ -0.21
NPC1L1-202ENST00000381160 SCAPERQ9BY12 1400 aa13.74□□□□□ -0.21
NPC1L1-202ENST00000381160 SPAG9O60271 1321 aaKnown RBP13.74□□□□□ -0.21
NPC1L1-202ENST00000381160 TMPOP42166 694 aaKnown RBP13.73□□□□□ -0.21
NPC1L1-202ENST00000381160 PKP1Q13835 747 aa13.73□□□□□ -0.21
NPC1L1-202ENST00000381160 AFAP1Q8N556 730 aa13.73□□□□□ -0.21
NPC1L1-202ENST00000381160 ZBTB40Q9NUA8 1239 aa13.73□□□□□ -0.21
NPC1L1-202ENST00000381160 CASC1Q6TDU7 716 aa13.73□□□□□ -0.21
NPC1L1-202ENST00000381160 ZMYM3Q14202 1370 aa13.73□□□□□ -0.21
NPC1L1-202ENST00000381160 CLASP1Q7Z460 1538 aa13.73□□□□□ -0.21
NPC1L1-202ENST00000381160 ST18O60284 1047 aa13.73□□□□□ -0.21
NPC1L1-202ENST00000381160 SRPK2P78362 688 aaKnown RBP13.73□□□□□ -0.21
NPC1L1-202ENST00000381160 SYCP2Q9BX26 1530 aa13.72□□□□□ -0.21
NPC1L1-202ENST00000381160 EFCAB2Q5VUJ9 269 aa13.72□□□□□ -0.21
NPC1L1-202ENST00000381160 CCDC39Q9UFE4 941 aa13.72□□□□□ -0.21
NPC1L1-202ENST00000381160 ADCY10Q96PN6 1610 aa13.72□□□□□ -0.21
NPC1L1-202ENST00000381160 BCL11BQ9C0K0 894 aaPredicted RBP13.71□□□□□ -0.21
NPC1L1-202ENST00000381160 STK26Q9P289 416 aa13.71□□□□□ -0.21
NPC1L1-202ENST00000381160 KIAA2012Q0VF49 1180 aa13.71□□□□□ -0.21
NPC1L1-202ENST00000381160 RABEP1Q15276 862 aa13.71□□□□□ -0.21
NPC1L1-202ENST00000381160 NOL7Q9UMY1 257 aaKnown RBP13.71□□□□□ -0.21
NPC1L1-202ENST00000381160 ABCC10Q5T3U5 1492 aa13.71□□□□□ -0.21
NPC1L1-202ENST00000381160 RTEL1-TNFRSF6BF6WH68 1400 aa13.71□□□□□ -0.22
NPC1L1-202ENST00000381160 CABP2Q9NPB3 220 aa13.71□□□□□ -0.22
NPC1L1-202ENST00000381160 ZKSCAN5Q9Y2L8 839 aa13.71□□□□□ -0.22
NPC1L1-202ENST00000381160 ZGPATQ8N5A5 531 aaKnown RBP13.7□□□□□ -0.22
NPC1L1-202ENST00000381160 DDIT3P35638 169 aa13.7□□□□□ -0.22
NPC1L1-202ENST00000381160 TSC1Q92574 1164 aa13.7□□□□□ -0.22
NPC1L1-202ENST00000381160 KANK1Q14678 1352 aa13.7□□□□□ -0.22
NPC1L1-202ENST00000381160 CT47B1P0C2W7 299 aaPredicted RBP13.7□□□□□ -0.22
NPC1L1-202ENST00000381160 THUMPD2Q9BTF0 503 aaKnown RBP13.7□□□□□ -0.22
NPC1L1-202ENST00000381160 CHMP4BQ9H444 224 aaKnown RBP13.7□□□□□ -0.22
NPC1L1-202ENST00000381160 CDC42BPAQ5VT25 1732 aa13.69□□□□□ -0.22
NPC1L1-202ENST00000381160 CCDC27Q2M243 656 aa13.69□□□□□ -0.22
NPC1L1-202ENST00000381160 GCC1Q96CN9 775 aa13.69□□□□□ -0.22
NPC1L1-202ENST00000381160 FAM177BA6PVY3 158 aa13.69□□□□□ -0.22
NPC1L1-202ENST00000381160 SYNMO15061 1565 aa13.69□□□□□ -0.22
NPC1L1-202ENST00000381160 KIF2CQ99661 725 aa13.69□□□□□ -0.22
NPC1L1-202ENST00000381160 CBX1P83916 185 aa13.68□□□□□ -0.22
NPC1L1-202ENST00000381160 SASS6Q6UVJ0 657 aa13.68□□□□□ -0.22
NPC1L1-202ENST00000381160 ZNF830Q96NB3 372 aaPredicted RBP13.68□□□□□ -0.22
NPC1L1-202ENST00000381160 MTERF4Q7Z6M4 381 aaKnown RBP13.68□□□□□ -0.22
NPC1L1-202ENST00000381160 BBXQ8WY36 941 aaPredicted RBP13.68□□□□□ -0.22
NPC1L1-202ENST00000381160 STAC3Q96MF2 364 aa13.68□□□□□ -0.22
NPC1L1-202ENST00000381160 DYNC1I1O14576 645 aa13.67□□□□□ -0.22
NPC1L1-202ENST00000381160 LMBRD1Q9NUN5 540 aa13.67□□□□□ -0.22
NPC1L1-202ENST00000381160 PDIA4P13667 645 aaKnown RBP13.67□□□□□ -0.22
NPC1L1-202ENST00000381160 ZNF445P59923 1031 aa13.67□□□□□ -0.22
NPC1L1-202ENST00000381160 OSCARQ8IYS5 282 aa13.67□□□□□ -0.22
NPC1L1-202ENST00000381160 HMOX1P09601 288 aa13.66□□□□□ -0.22
NPC1L1-202ENST00000381160 VIRMAQ69YN4 1812 aaKnown RBP13.66□□□□□ -0.22
NPC1L1-202ENST00000381160 INTS3Q68E01 1043 aaKnown RBP13.66□□□□□ -0.22
NPC1L1-202ENST00000381160 JARID2Q92833 1246 aaPredicted RBP13.66□□□□□ -0.22
NPC1L1-202ENST00000381160 C16orf71Q8IYS4 520 aaPredicted RBP13.65□□□□□ -0.22
NPC1L1-202ENST00000381160 GDPD2Q9HCC8 539 aa13.65□□□□□ -0.22
NPC1L1-202ENST00000381160 NEK4P51957 841 aa13.65□□□□□ -0.22
NPC1L1-202ENST00000381160 DIAPH1O60610 1272 aaKnown RBP13.65□□□□□ -0.22
NPC1L1-202ENST00000381160 TSPY26PQ9H489 355 aa13.65□□□□□ -0.22
NPC1L1-202ENST00000381160 HS1BP3Q53T59 392 aa13.64□□□□□ -0.23
NPC1L1-202ENST00000381160 SYAP1Q96A49 352 aaPredicted RBP13.64□□□□□ -0.23
NPC1L1-202ENST00000381160 PHF23Q9BUL5 403 aaPredicted RBP13.64□□□□□ -0.23
NPC1L1-202ENST00000381160 TMEM63CQ9P1W3 806 aa13.64□□□□□ -0.23
NPC1L1-202ENST00000381160 TRIM35Q9UPQ4 493 aa13.64□□□□□ -0.23
NPC1L1-202ENST00000381160 ZNF500O60304 480 aaPredicted RBP13.64□□□□□ -0.23
NPC1L1-202ENST00000381160 LRSAM1Q6UWE0 723 aa13.64□□□□□ -0.23
NPC1L1-202ENST00000381160 GPT2Q8TD30 523 aa13.64□□□□□ -0.23
NPC1L1-202ENST00000381160 NCOA3Q9Y6Q9 1424 aa13.64□□□□□ -0.23
NPC1L1-202ENST00000381160 ERVK-7P63135 1459 aa13.63□□□□□ -0.23
NPC1L1-202ENST00000381160 PRDM4Q9UKN5 801 aa13.63□□□□□ -0.23
NPC1L1-202ENST00000381160 SMARCA5O60264 1052 aaPredicted RBP13.63□□□□□ -0.23
NPC1L1-202ENST00000381160 PRKAR2BP31323 418 aa13.63□□□□□ -0.23
NPC1L1-202ENST00000381160 TERF1P54274 439 aa13.63□□□□□ -0.23
NPC1L1-202ENST00000381160 C17orf53Q8N3J3 647 aaPredicted RBP13.63□□□□□ -0.23
NPC1L1-202ENST00000381160 CWC22Q9HCG8 908 aaKnown RBP13.63□□□□□ -0.23
NPC1L1-202ENST00000381160 EVC2Q86UK5 1308 aa13.63□□□□□ -0.23
NPC1L1-202ENST00000381160 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.62□□□□□ -0.23
NPC1L1-202ENST00000381160 NSFL1CQ9UNZ2 370 aaKnown RBP13.62□□□□□ -0.23
NPC1L1-202ENST00000381160 SAMD9LQ8IVG5 1584 aa13.62□□□□□ -0.23
NPC1L1-202ENST00000381160 CHAF1AQ13111 956 aaPredicted RBP13.62□□□□□ -0.23
NPC1L1-202ENST00000381160 GGT6Q6P531 493 aa13.62□□□□□ -0.23
NPC1L1-202ENST00000381160 USP25Q9UHP3 1055 aa13.62□□□□□ -0.23
NPC1L1-202ENST00000381160 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.62□□□□□ -0.23
NPC1L1-202ENST00000381160 MBD3O95983 291 aa13.61□□□□□ -0.23
NPC1L1-202ENST00000381160 SMAP1Q8IYB5 467 aaPredicted RBP13.61□□□□□ -0.23
NPC1L1-202ENST00000381160 ATAD2Q6PL18 1390 aa13.61□□□□□ -0.23
NPC1L1-202ENST00000381160 SPDYE4A6NLX3 237 aa13.61□□□□□ -0.23
NPC1L1-202ENST00000381160 REC8O95072 547 aa13.61□□□□□ -0.23
NPC1L1-202ENST00000381160 FBLN1P23142 703 aa13.61□□□□□ -0.23
NPC1L1-202ENST00000381160 ARHGEF5Q12774 1597 aa13.61□□□□□ -0.23
NPC1L1-202ENST00000381160 ZBTB7BO15156 539 aaPredicted RBP13.61□□□□□ -0.23
NPC1L1-202ENST00000381160 GSPT1P15170 499 aaKnown RBP13.61□□□□□ -0.23
NPC1L1-202ENST00000381160 OTUD7AQ8TE49 926 aaPredicted RBP13.61□□□□□ -0.23
NPC1L1-202ENST00000381160 CFAP44Q96MT7 982 aa13.61□□□□□ -0.23
NPC1L1-202ENST00000381160 IGSF3O75054 1194 aa13.6□□□□□ -0.23
NPC1L1-202ENST00000381160 TSPYL6Q8N831 410 aa13.6□□□□□ -0.23
NPC1L1-202ENST00000381160 TTC12Q9H892 705 aaPredicted RBP13.6□□□□□ -0.23
NPC1L1-202ENST00000381160 LAMC1P11047 1609 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms